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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0480
ALA 10.0177
ASP 20.0093
VAL 30.0104
VAL 40.0131
MET 50.0096
THR 60.0131
GLN 70.0083
THR 80.0072
PRO 90.0067
SER 100.0082
SER 100.0082
SER 110.0058
VAL 120.0046
VAL 120.0045
SER 130.0057
SER 130.0057
ALA 140.0072
ALA 150.0083
VAL 160.0073
GLY 170.0106
GLY 180.0098
THR 190.0044
VAL 200.0022
THR 210.0032
THR 210.0033
ILE 220.0053
ASN 230.0057
CYS 240.0069
CYS 240.0068
GLN 250.0101
GLN 250.0098
ALA 260.0099
SER 270.0161
GLN 280.0169
SER 290.0141
ILE 300.0079
SER 310.0095
SER 310.0095
ALA 320.0047
TYR 330.0035
LEU 340.0066
ALA 350.0077
TRP 360.0082
TYR 370.0054
GLN 380.0033
GLN 390.0045
LYS 400.0106
PRO 410.0169
GLY 420.0206
GLN 430.0124
PRO 440.0068
PRO 450.0038
LYS 460.0018
LEU 470.0048
LEU 480.0071
ILE 490.0089
ILE 490.0089
TYR 500.0088
ASP 510.0096
ALA 520.0095
SER 530.0096
ASP 540.0098
LEU 550.0161
ALA 560.0164
SER 570.0236
SER 570.0236
GLY 580.0267
VAL 590.0161
SER 600.0132
SER 610.0104
ARG 620.0058
PHE 630.0061
LYS 640.0075
GLY 650.0083
SER 660.0084
GLY 670.0053
SER 680.0059
GLY 690.0112
THR 700.0103
GLN 710.0085
PHE 720.0050
THR 730.0062
LEU 740.0059
THR 750.0041
ILE 760.0024
SER 770.0043
SER 770.0043
ASP 780.0080
LEU 790.0062
GLU 800.0054
CYS 810.0059
ALA 820.0058
ASP 830.0053
ALA 840.0048
ALA 850.0027
THR 860.0045
TYR 870.0053
TYR 880.0071
CYS 890.0076
CYS 890.0076
GLN 900.0072
THR 910.0034
TYR 920.0044
TYR 930.0049
ALA 940.0104
ILE 950.0050
ILE 960.0075
THR 970.0126
TYR 980.0080
GLY 990.0020
ALA 1000.0047
ALA 1010.0048
PHE 1020.0063
GLY 1030.0087
GLY 1040.0087
GLY 1050.0071
THR 1060.0059
GLU 1070.0042
GLU 1070.0042
VAL 1080.0021
VAL 1090.0038
VAL 1100.0047
LYS 1110.0051
ARG 1120.0073
THR 1130.0131
VAL 1140.0146
ALA 1150.0101
ALA 1160.0095
PRO 1170.0087
SER 1180.0077
SER 1180.0077
VAL 1190.0093
PHE 1200.0114
ILE 1210.0111
PHE 1220.0097
PRO 1230.0111
PRO 1240.0127
SER 1250.0127
ASP 1260.0129
GLU 1270.0122
GLN 1280.0109
LEU 1290.0114
LYS 1300.0146
SER 1310.0127
GLY 1320.0106
THR 1330.0089
ALA 1340.0111
SER 1350.0124
VAL 1360.0139
VAL 1370.0115
CYS 1380.0117
LEU 1390.0070
LEU 1400.0059
ASN 1410.0055
ASN 1420.0066
ASN 1420.0065
PHE 1430.0070
TYR 1440.0065
PRO 1450.0076
ARG 1460.0060
GLU 1470.0096
ALA 1480.0090
LYS 1490.0106
VAL 1500.0132
GLN 1510.0255
TRP 1520.0208
LYS 1530.0160
VAL 1540.0169
ASP 1550.0168
ASN 1560.0256
ALA 1570.0258
LEU 1580.0324
GLN 1590.0311
SER 1600.0366
GLY 1610.0450
ASN 1620.0371
SER 1630.0181
GLN 1640.0079
GLU 1650.0030
SER 1660.0054
SER 1660.0055
VAL 1670.0056
VAL 1670.0055
THR 1680.0073
GLU 1690.0092
GLU 1690.0094
GLN 1700.0067
ASP 1710.0098
SER 1720.0159
LYS 1730.0185
ASP 1740.0133
CYS 1750.0065
THR 1760.0051
TYR 1770.0026
SER 1780.0030
LEU 1790.0024
SER 1800.0031
SER 1810.0109
THR 1820.0130
LEU 1830.0162
THR 1840.0160
LEU 1850.0114
SER 1860.0064
LYS 1870.0072
ALA 1880.0064
ASP 1890.0032
TYR 1900.0028
GLU 1910.0093
LYS 1920.0119
HIS 1930.0056
LYS 1940.0034
LYS 1940.0033
VAL 1950.0110
TYR 1960.0127
ALA 1970.0132
CYS 1980.0154
CYS 1980.0154
GLU 1990.0135
VAL 2000.0116
THR 2010.0096
HIS 2020.0083
GLN 2030.0101
GLY 2040.0080
LEU 2050.0129
SER 2060.0402
SER 2070.0400
PRO 2080.0110
VAL 2090.0031
THR 2100.0099
LYS 2110.0139
SER 2120.0154
PHE 2130.0169
ASN 2140.0196
ARG 2150.0173
GLY 2160.0275
GLU 2170.0480
SER 20.0110
VAL 30.0078
GLU 40.0083
GLU 50.0067
SER 60.0060
GLY 70.0056
GLY 80.0031
ARG 90.0065
LEU 100.0095
VAL 110.0085
THR 120.0127
PRO 130.0168
GLY 140.0183
THR 150.0114
PRO 160.0109
LEU 170.0038
THR 180.0062
LEU 190.0066
THR 200.0063
CYS 210.0062
THR 220.0074
VAL 230.0094
SER 240.0140
GLY 250.0151
PHE 260.0088
SER 270.0093
LEU 280.0067
SER 290.0110
SER 290.0110
ASP 300.0090
TYR 310.0050
ALA 320.0043
MET 330.0046
SER 340.0067
TRP 350.0071
VAL 360.0067
ARG 370.0054
GLN 380.0053
ALA 390.0036
PRO 400.0083
GLY 410.0084
LYS 420.0068
GLY 430.0081
LEU 440.0067
GLU 450.0063
TRP 460.0066
ILE 470.0074
GLY 480.0068
ILE 490.0059
ILE 500.0049
TYR 510.0042
ALA 520.0053
SER 530.0090
GLY 540.0066
SER 550.0091
THR 560.0062
THR 560.0062
TYR 570.0069
TYR 580.0087
ALA 590.0084
SER 600.0089
TRP 610.0064
ALA 620.0057
LYS 630.0071
GLY 640.0069
ARG 650.0049
PHE 660.0048
THR 670.0065
ILE 680.0061
SER 690.0033
LYS 700.0014
THR 710.0088
SER 720.0139
THR 730.0122
THR 740.0059
VAL 750.0033
ASP 760.0051
LEU 770.0084
LYS 780.0083
ILE 790.0065
THR 800.0145
SER 810.0159
PRO 820.0128
THR 830.0190
THR 840.0184
GLU 850.0133
ASP 860.0058
THR 870.0070
ALA 880.0053
THR 890.0040
TYR 900.0051
PHE 910.0075
CYS 920.0076
CYS 920.0076
ALA 930.0068
ARG 940.0052
TYR 950.0067
TYR 960.0067
TYR 960.0067
ALA 970.0075
GLY 980.0079
SER 990.0073
ASP 1000.0058
ILE 1010.0056
ILE 1010.0057
TRP 1020.0065
GLY 1030.0067
PRO 1040.0074
GLY 1050.0064
THR 1060.0058
LEU 1070.0044
LEU 1070.0044
VAL 1080.0039
THR 1090.0071
VAL 1100.0119
SER 1110.0149
SER 1120.0157
ALA 1130.0142
SER 1140.0139
THR 1150.0128
LYS 1160.0067
GLY 1170.0089
PRO 1180.0095
SER 1190.0085
VAL 1200.0096
PHE 1210.0085
PRO 1220.0051
LEU 1230.0029
ALA 1240.0029
PRO 1250.0059
SER 1260.0081
GLY 1330.0332
THR 1340.0220
THR 1340.0219
ALA 1350.0154
ALA 1360.0057
LEU 1370.0060
GLY 1380.0084
CYS 1390.0089
CYS 1390.0088
LEU 1400.0079
VAL 1410.0077
LYS 1420.0079
ASP 1430.0069
TYR 1440.0053
PHE 1450.0038
PRO 1460.0056
GLU 1470.0038
GLU 1470.0037
PRO 1480.0043
VAL 1490.0039
THR 1500.0062
VAL 1510.0141
SER 1520.0174
TRP 1530.0173
ASN 1540.0227
SER 1550.0309
GLY 1560.0343
ALA 1570.0313
LEU 1580.0240
THR 1590.0277
SER 1600.0232
SER 1600.0232
GLY 1610.0188
VAL 1620.0153
HIS 1630.0083
THR 1640.0087
PHE 1650.0084
PRO 1660.0064
ALA 1670.0066
VAL 1680.0081
VAL 1680.0080
LEU 1690.0106
GLN 1700.0153
SER 1710.0211
SER 1720.0203
GLY 1730.0148
LEU 1740.0076
TYR 1750.0054
SER 1760.0075
SER 1760.0075
LEU 1770.0086
SER 1780.0072
SER 1780.0072
SER 1790.0082
VAL 1800.0070
VAL 1810.0075
THR 1820.0055
VAL 1830.0051
PRO 1840.0114
SER 1850.0096
SER 1850.0097
SER 1860.0043
SER 1870.0131
LEU 1880.0163
GLY 1890.0267
THR 1900.0416
GLN 1910.0230
GLN 1910.0228
THR 1920.0180
TYR 1930.0097
ILE 1940.0128
CYS 1950.0150
CYS 1950.0149
ASN 1960.0147
VAL 1970.0105
ASN 1980.0074
ASN 1980.0074
HIS 1990.0060
LYS 2000.0096
PRO 2010.0114
SER 2020.0154
ASN 2030.0192
THR 2040.0158
LYS 2050.0085
VAL 2060.0111
ASP 2070.0147
LYS 2080.0122
LYS 2090.0105
VAL 2100.0091
GLU 2110.0114
PRO 2120.0112
LYS 2130.0087
SER 2140.0091

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.