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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0464
ALA 10.0067
ASP 20.0066
VAL 30.0061
VAL 40.0130
MET 50.0115
THR 60.0180
GLN 70.0128
THR 80.0110
PRO 90.0091
SER 100.0123
SER 100.0123
SER 110.0088
VAL 120.0099
VAL 120.0097
SER 130.0143
SER 130.0142
ALA 140.0177
ALA 150.0214
VAL 160.0214
GLY 170.0225
GLY 180.0202
THR 190.0100
VAL 200.0088
THR 210.0093
THR 210.0095
ILE 220.0067
ASN 230.0070
CYS 240.0088
CYS 240.0087
GLN 250.0138
GLN 250.0133
ALA 260.0088
SER 270.0140
GLN 280.0159
SER 290.0195
ILE 300.0154
SER 310.0237
SER 310.0236
ALA 320.0181
TYR 330.0151
LEU 340.0080
ALA 350.0088
TRP 360.0092
TYR 370.0061
GLN 380.0052
GLN 390.0049
LYS 400.0075
PRO 410.0124
GLY 420.0119
GLN 430.0066
PRO 440.0035
PRO 450.0036
LYS 460.0052
LEU 470.0050
LEU 480.0077
ILE 490.0099
ILE 490.0098
TYR 500.0084
ASP 510.0100
ALA 520.0109
SER 530.0117
ASP 540.0095
LEU 550.0164
ALA 560.0123
SER 570.0173
SER 570.0173
GLY 580.0199
VAL 590.0124
SER 600.0131
SER 610.0142
ARG 620.0076
PHE 630.0109
LYS 640.0127
GLY 650.0106
SER 660.0105
GLY 670.0150
SER 680.0194
GLY 690.0244
THR 700.0168
GLN 710.0162
PHE 720.0092
THR 730.0084
LEU 740.0088
THR 750.0086
ILE 760.0070
SER 770.0073
SER 770.0073
ASP 780.0105
LEU 790.0137
GLU 800.0141
CYS 810.0137
ALA 820.0111
ASP 830.0111
ALA 840.0107
ALA 850.0046
THR 860.0061
TYR 870.0078
TYR 880.0090
CYS 890.0085
CYS 890.0085
GLN 900.0076
THR 910.0065
TYR 920.0114
TYR 930.0136
ALA 940.0051
ILE 950.0047
ILE 960.0045
THR 970.0119
TYR 980.0085
GLY 990.0063
ALA 1000.0064
ALA 1010.0068
PHE 1020.0078
GLY 1030.0123
GLY 1040.0140
GLY 1050.0107
THR 1060.0093
GLU 1070.0062
GLU 1070.0062
VAL 1080.0059
VAL 1090.0106
VAL 1100.0139
LYS 1110.0161
ARG 1120.0071
THR 1130.0081
VAL 1140.0113
ALA 1150.0069
ALA 1160.0053
PRO 1170.0018
SER 1180.0044
SER 1180.0044
VAL 1190.0048
PHE 1200.0067
ILE 1210.0015
PHE 1220.0022
PRO 1230.0037
PRO 1240.0042
SER 1250.0041
ASP 1260.0043
GLU 1270.0052
GLN 1280.0042
LEU 1290.0053
LYS 1300.0099
SER 1310.0064
GLY 1320.0097
THR 1330.0054
ALA 1340.0043
SER 1350.0054
VAL 1360.0032
VAL 1370.0026
CYS 1380.0026
LEU 1390.0019
LEU 1400.0018
ASN 1410.0024
ASN 1420.0055
ASN 1420.0054
PHE 1430.0048
TYR 1440.0043
PRO 1450.0066
ARG 1460.0072
GLU 1470.0099
ALA 1480.0047
LYS 1490.0043
VAL 1500.0053
GLN 1510.0122
TRP 1520.0083
LYS 1530.0076
VAL 1540.0080
ASP 1550.0080
ASN 1560.0093
ALA 1570.0141
LEU 1580.0172
GLN 1590.0168
SER 1600.0343
GLY 1610.0285
ASN 1620.0090
SER 1630.0065
GLN 1640.0058
GLU 1650.0072
SER 1660.0054
SER 1660.0054
VAL 1670.0046
VAL 1670.0046
THR 1680.0061
GLU 1690.0151
GLU 1690.0152
GLN 1700.0130
ASP 1710.0143
SER 1720.0250
LYS 1730.0234
ASP 1740.0152
CYS 1750.0099
THR 1760.0072
TYR 1770.0060
SER 1780.0033
LEU 1790.0031
SER 1800.0037
SER 1810.0047
THR 1820.0045
LEU 1830.0038
THR 1840.0060
LEU 1850.0045
SER 1860.0047
LYS 1870.0085
ALA 1880.0106
ASP 1890.0093
TYR 1900.0061
GLU 1910.0071
LYS 1920.0071
HIS 1930.0071
LYS 1940.0064
LYS 1940.0064
VAL 1950.0072
TYR 1960.0052
ALA 1970.0059
CYS 1980.0067
CYS 1980.0067
GLU 1990.0098
VAL 2000.0053
THR 2010.0034
HIS 2020.0071
GLN 2030.0121
GLY 2040.0105
LEU 2050.0036
SER 2060.0074
SER 2070.0140
PRO 2080.0102
VAL 2090.0096
THR 2100.0098
LYS 2110.0065
SER 2120.0053
PHE 2130.0047
ASN 2140.0052
ARG 2150.0049
GLY 2160.0052
GLU 2170.0077
SER 20.0178
VAL 30.0113
GLU 40.0088
GLU 50.0035
SER 60.0044
GLY 70.0081
GLY 80.0175
ARG 90.0158
LEU 100.0113
VAL 110.0160
THR 120.0139
PRO 130.0122
GLY 140.0155
THR 150.0188
PRO 160.0179
LEU 170.0123
THR 180.0118
LEU 190.0129
THR 200.0063
CYS 210.0047
THR 220.0121
VAL 230.0185
SER 240.0270
GLY 250.0302
PHE 260.0166
SER 270.0111
LEU 280.0062
SER 290.0032
SER 290.0031
ASP 300.0055
TYR 310.0060
ALA 320.0038
MET 330.0016
SER 340.0023
TRP 350.0058
VAL 360.0059
ARG 370.0062
GLN 380.0111
ALA 390.0140
PRO 400.0148
GLY 410.0188
LYS 420.0179
GLY 430.0085
LEU 440.0066
GLU 450.0055
TRP 460.0036
ILE 470.0047
GLY 480.0035
ILE 490.0032
ILE 500.0060
TYR 510.0076
ALA 520.0086
SER 530.0221
GLY 540.0179
SER 550.0129
THR 560.0066
THR 560.0067
TYR 570.0050
TYR 580.0050
ALA 590.0079
SER 600.0131
TRP 610.0122
ALA 620.0084
LYS 630.0112
GLY 640.0134
ARG 650.0069
PHE 660.0052
THR 670.0068
ILE 680.0072
SER 690.0093
LYS 700.0102
THR 710.0256
SER 720.0275
THR 730.0250
THR 740.0135
VAL 750.0069
ASP 760.0078
LEU 770.0097
LYS 780.0091
ILE 790.0069
THR 800.0115
SER 810.0115
PRO 820.0083
THR 830.0082
THR 840.0081
GLU 850.0087
ASP 860.0084
THR 870.0105
ALA 880.0128
THR 890.0108
TYR 900.0085
PHE 910.0064
CYS 920.0018
CYS 920.0019
ALA 930.0045
ARG 940.0074
TYR 950.0088
TYR 960.0125
TYR 960.0125
ALA 970.0120
GLY 980.0085
SER 990.0087
ASP 1000.0093
ILE 1010.0093
ILE 1010.0092
TRP 1020.0060
GLY 1030.0060
PRO 1040.0062
GLY 1050.0077
THR 1060.0092
LEU 1070.0149
LEU 1070.0149
VAL 1080.0131
THR 1090.0102
VAL 1100.0102
SER 1110.0080
SER 1120.0088
ALA 1130.0059
SER 1140.0059
THR 1150.0037
LYS 1160.0059
GLY 1170.0056
PRO 1180.0061
SER 1190.0015
VAL 1200.0032
PHE 1210.0044
PRO 1220.0035
LEU 1230.0042
ALA 1240.0052
PRO 1250.0090
SER 1260.0109
GLY 1330.0464
THR 1340.0252
THR 1340.0251
ALA 1350.0176
ALA 1360.0052
LEU 1370.0053
GLY 1380.0072
CYS 1390.0054
CYS 1390.0054
LEU 1400.0047
VAL 1410.0035
LYS 1420.0058
ASP 1430.0058
TYR 1440.0052
PHE 1450.0029
PRO 1460.0024
GLU 1470.0027
GLU 1470.0027
PRO 1480.0058
VAL 1490.0056
THR 1500.0066
VAL 1510.0073
SER 1520.0129
TRP 1530.0145
ASN 1540.0217
SER 1550.0346
GLY 1560.0397
ALA 1570.0344
LEU 1580.0254
THR 1590.0340
SER 1600.0305
SER 1600.0306
GLY 1610.0252
VAL 1620.0152
HIS 1630.0056
THR 1640.0036
PHE 1650.0039
PRO 1660.0059
ALA 1670.0060
VAL 1680.0066
VAL 1680.0066
LEU 1690.0089
GLN 1700.0103
SER 1710.0127
SER 1720.0127
GLY 1730.0105
LEU 1740.0080
TYR 1750.0058
SER 1760.0059
SER 1760.0059
LEU 1770.0059
SER 1780.0041
SER 1780.0041
SER 1790.0046
VAL 1800.0058
VAL 1810.0084
THR 1820.0044
VAL 1830.0009
PRO 1840.0229
SER 1850.0233
SER 1850.0233
SER 1860.0235
SER 1870.0115
LEU 1880.0079
GLY 1890.0155
THR 1900.0348
GLN 1910.0209
GLN 1910.0207
THR 1920.0156
TYR 1930.0042
ILE 1940.0074
CYS 1950.0095
CYS 1950.0095
ASN 1960.0078
VAL 1970.0029
ASN 1980.0074
ASN 1980.0074
HIS 1990.0091
LYS 2000.0131
PRO 2010.0103
SER 2020.0144
ASN 2030.0192
THR 2040.0133
LYS 2050.0089
VAL 2060.0066
ASP 2070.0087
LYS 2080.0071
LYS 2090.0068
VAL 2100.0069
GLU 2110.0112
PRO 2120.0135
LYS 2130.0131
SER 2140.0416

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.