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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1135
ALA 10.0120
ASP 20.0079
VAL 30.0073
VAL 40.0089
MET 50.0041
THR 60.0048
GLN 70.0048
THR 80.0060
PRO 90.0068
SER 100.0075
SER 100.0075
SER 110.0053
VAL 120.0035
VAL 120.0035
SER 130.0057
SER 130.0057
ALA 140.0094
ALA 150.0126
VAL 160.0122
GLY 170.0127
GLY 180.0098
THR 190.0046
VAL 200.0030
THR 210.0042
THR 210.0042
ILE 220.0049
ASN 230.0050
CYS 240.0038
CYS 240.0038
GLN 250.0032
GLN 250.0030
ALA 260.0061
SER 270.0118
GLN 280.0135
SER 290.0129
ILE 300.0092
SER 310.0104
SER 310.0104
ALA 320.0094
TYR 330.0065
LEU 340.0047
ALA 350.0049
TRP 360.0050
TYR 370.0036
GLN 380.0038
GLN 390.0037
LYS 400.0056
PRO 410.0069
GLY 420.0105
GLN 430.0071
PRO 440.0052
PRO 450.0060
LYS 460.0088
LEU 470.0048
LEU 480.0020
ILE 490.0027
ILE 490.0027
TYR 500.0031
ASP 510.0040
ALA 520.0051
SER 530.0032
ASP 540.0027
LEU 550.0097
ALA 560.0097
SER 570.0195
SER 570.0195
GLY 580.0249
VAL 590.0152
SER 600.0165
SER 610.0132
ARG 620.0077
PHE 630.0054
LYS 640.0053
GLY 650.0045
SER 660.0070
GLY 670.0057
SER 680.0076
GLY 690.0086
THR 700.0074
GLN 710.0047
PHE 720.0050
THR 730.0061
LEU 740.0039
THR 750.0036
ILE 760.0036
SER 770.0054
SER 770.0054
ASP 780.0086
LEU 790.0097
GLU 800.0096
CYS 810.0082
ALA 820.0062
ASP 830.0059
ALA 840.0040
ALA 850.0031
THR 860.0033
TYR 870.0033
TYR 880.0047
CYS 890.0048
CYS 890.0048
GLN 900.0048
THR 910.0035
TYR 920.0049
TYR 930.0060
ALA 940.0073
ILE 950.0054
ILE 960.0057
THR 970.0080
TYR 980.0068
GLY 990.0054
ALA 1000.0048
ALA 1010.0048
PHE 1020.0050
GLY 1030.0046
GLY 1040.0045
GLY 1050.0048
THR 1060.0049
GLU 1070.0038
GLU 1070.0038
VAL 1080.0034
VAL 1090.0044
VAL 1100.0076
LYS 1110.0111
ARG 1120.0131
THR 1130.0152
VAL 1140.0153
ALA 1150.0113
ALA 1160.0109
PRO 1170.0094
SER 1180.0058
SER 1180.0058
VAL 1190.0064
PHE 1200.0072
ILE 1210.0049
PHE 1220.0053
PRO 1230.0062
PRO 1240.0045
SER 1250.0054
ASP 1260.0068
GLU 1270.0097
GLN 1280.0050
LEU 1290.0060
LYS 1300.0144
SER 1310.0062
GLY 1320.0107
THR 1330.0026
ALA 1340.0040
SER 1350.0086
VAL 1360.0078
VAL 1370.0060
CYS 1380.0051
LEU 1390.0069
LEU 1400.0062
ASN 1410.0056
ASN 1420.0066
ASN 1420.0066
PHE 1430.0077
TYR 1440.0076
PRO 1450.0091
ARG 1460.0058
GLU 1470.0069
ALA 1480.0076
LYS 1490.0088
VAL 1500.0085
GLN 1510.0151
TRP 1520.0074
LYS 1530.0064
VAL 1540.0114
ASP 1550.0144
ASN 1560.0109
ALA 1570.0079
LEU 1580.0201
GLN 1590.0316
SER 1600.1108
GLY 1610.1135
ASN 1620.0515
SER 1630.0131
GLN 1640.0120
GLU 1650.0142
SER 1660.0086
SER 1660.0086
VAL 1670.0086
VAL 1670.0087
THR 1680.0089
GLU 1690.0062
GLU 1690.0062
GLN 1700.0033
ASP 1710.0034
SER 1720.0044
LYS 1730.0047
ASP 1740.0065
CYS 1750.0061
THR 1760.0052
TYR 1770.0061
SER 1780.0074
LEU 1790.0070
SER 1800.0068
SER 1810.0057
THR 1820.0068
LEU 1830.0100
THR 1840.0163
LEU 1850.0094
SER 1860.0027
LYS 1870.0109
ALA 1880.0177
ASP 1890.0154
TYR 1900.0101
GLU 1910.0174
LYS 1920.0213
HIS 1930.0099
LYS 1940.0078
LYS 1940.0078
VAL 1950.0108
TYR 1960.0077
ALA 1970.0074
CYS 1980.0074
CYS 1980.0074
GLU 1990.0117
VAL 2000.0095
THR 2010.0113
HIS 2020.0133
GLN 2030.0137
GLY 2040.0164
LEU 2050.0186
SER 2060.0333
SER 2070.0343
PRO 2080.0163
VAL 2090.0094
THR 2100.0128
LYS 2110.0074
SER 2120.0073
PHE 2130.0085
ASN 2140.0116
ARG 2150.0104
GLY 2160.0182
GLU 2170.0298
SER 20.0029
VAL 30.0033
GLU 40.0055
GLU 50.0060
SER 60.0064
GLY 70.0063
GLY 80.0020
ARG 90.0050
LEU 100.0103
VAL 110.0102
THR 120.0134
PRO 130.0154
GLY 140.0145
THR 150.0058
PRO 160.0118
LEU 170.0061
THR 180.0085
LEU 190.0067
THR 200.0071
CYS 210.0054
THR 220.0041
VAL 230.0008
SER 240.0048
GLY 250.0080
PHE 260.0069
SER 270.0083
LEU 280.0081
SER 290.0128
SER 290.0128
ASP 300.0115
TYR 310.0089
ALA 320.0067
MET 330.0058
SER 340.0067
TRP 350.0037
VAL 360.0030
ARG 370.0030
GLN 380.0028
ALA 390.0037
PRO 400.0066
GLY 410.0102
LYS 420.0090
GLY 430.0091
LEU 440.0052
GLU 450.0053
TRP 460.0054
ILE 470.0059
GLY 480.0057
ILE 490.0056
ILE 500.0080
TYR 510.0086
ALA 520.0093
SER 530.0136
GLY 540.0124
SER 550.0136
THR 560.0079
THR 560.0079
TYR 570.0084
TYR 580.0085
ALA 590.0049
SER 600.0037
TRP 610.0038
ALA 620.0056
LYS 630.0020
GLY 640.0083
ARG 650.0099
PHE 660.0067
THR 670.0078
ILE 680.0065
SER 690.0061
LYS 700.0042
THR 710.0071
SER 720.0071
THR 730.0032
THR 740.0028
VAL 750.0042
ASP 760.0061
LEU 770.0072
LYS 780.0099
ILE 790.0087
THR 800.0179
SER 810.0175
PRO 820.0140
THR 830.0207
THR 840.0213
GLU 850.0201
ASP 860.0084
THR 870.0079
ALA 880.0052
THR 890.0016
TYR 900.0010
PHE 910.0029
CYS 920.0059
CYS 920.0059
ALA 930.0054
ARG 940.0046
TYR 950.0070
TYR 960.0066
TYR 960.0066
ALA 970.0069
GLY 980.0066
SER 990.0066
ASP 1000.0054
ILE 1010.0041
ILE 1010.0041
TRP 1020.0049
GLY 1030.0052
PRO 1040.0050
GLY 1050.0034
THR 1060.0022
LEU 1070.0034
LEU 1070.0034
VAL 1080.0045
THR 1090.0076
VAL 1100.0151
SER 1110.0214
SER 1120.0268
ALA 1130.0252
SER 1140.0214
THR 1150.0155
LYS 1160.0122
GLY 1170.0107
PRO 1180.0102
SER 1190.0068
VAL 1200.0056
PHE 1210.0054
PRO 1220.0013
LEU 1230.0010
ALA 1240.0018
PRO 1250.0024
SER 1260.0035
GLY 1330.0193
THR 1340.0114
THR 1340.0115
ALA 1350.0060
ALA 1360.0018
LEU 1370.0015
GLY 1380.0011
CYS 1390.0051
CYS 1390.0051
LEU 1400.0061
VAL 1410.0074
LYS 1420.0108
ASP 1430.0110
TYR 1440.0114
PHE 1450.0108
PRO 1460.0115
GLU 1470.0127
GLU 1470.0126
PRO 1480.0150
VAL 1490.0143
THR 1500.0187
VAL 1510.0062
SER 1520.0055
TRP 1530.0057
ASN 1540.0092
SER 1550.0139
GLY 1560.0132
ALA 1570.0153
LEU 1580.0100
THR 1590.0108
SER 1600.0107
SER 1600.0108
GLY 1610.0081
VAL 1620.0049
HIS 1630.0052
THR 1640.0044
PHE 1650.0041
PRO 1660.0080
ALA 1670.0080
VAL 1680.0088
VAL 1680.0088
LEU 1690.0123
GLN 1700.0111
SER 1710.0133
SER 1720.0145
GLY 1730.0162
LEU 1740.0136
TYR 1750.0116
SER 1760.0107
SER 1760.0107
LEU 1770.0100
SER 1780.0031
SER 1780.0031
SER 1790.0029
VAL 1800.0028
VAL 1810.0026
THR 1820.0018
VAL 1830.0031
PRO 1840.0097
SER 1850.0070
SER 1850.0071
SER 1860.0075
SER 1870.0079
LEU 1880.0067
GLY 1890.0118
THR 1900.0207
GLN 1910.0112
GLN 1910.0111
THR 1920.0087
TYR 1930.0044
ILE 1940.0059
CYS 1950.0062
CYS 1950.0063
ASN 1960.0084
VAL 1970.0106
ASN 1980.0156
ASN 1980.0157
HIS 1990.0139
LYS 2000.0157
PRO 2010.0089
SER 2020.0076
ASN 2030.0150
THR 2040.0131
LYS 2050.0149
VAL 2060.0071
ASP 2070.0065
LYS 2080.0041
LYS 2090.0040
VAL 2100.0040
GLU 2110.0055
PRO 2120.0056
LYS 2130.0053
SER 2140.0100

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.