CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0762
ALA 10.0090
ASP 20.0076
VAL 30.0051
VAL 40.0083
MET 50.0061
THR 60.0105
GLN 70.0080
THR 80.0080
PRO 90.0072
SER 100.0100
SER 100.0100
SER 110.0089
VAL 120.0097
VAL 120.0096
SER 130.0117
SER 130.0116
ALA 140.0132
ALA 150.0141
VAL 160.0159
GLY 170.0161
GLY 180.0163
THR 190.0092
VAL 200.0088
THR 210.0090
THR 210.0091
ILE 220.0034
ASN 230.0039
CYS 240.0046
CYS 240.0045
GLN 250.0083
GLN 250.0079
ALA 260.0044
SER 270.0069
GLN 280.0113
SER 290.0166
ILE 300.0156
SER 310.0225
SER 310.0224
ALA 320.0187
TYR 330.0159
LEU 340.0066
ALA 350.0064
TRP 360.0058
TYR 370.0047
GLN 380.0036
GLN 390.0025
LYS 400.0076
PRO 410.0128
GLY 420.0141
GLN 430.0081
PRO 440.0049
PRO 450.0040
LYS 460.0028
LEU 470.0040
LEU 480.0058
ILE 490.0070
ILE 490.0070
TYR 500.0063
ASP 510.0068
ALA 520.0072
SER 530.0074
ASP 540.0066
LEU 550.0122
ALA 560.0108
SER 570.0153
SER 570.0153
GLY 580.0121
VAL 590.0103
SER 600.0115
SER 610.0106
ARG 620.0088
PHE 630.0100
LYS 640.0094
GLY 650.0063
SER 660.0051
GLY 670.0143
SER 680.0193
GLY 690.0220
THR 700.0136
GLN 710.0130
PHE 720.0078
THR 730.0049
LEU 740.0058
THR 750.0067
ILE 760.0081
SER 770.0087
SER 770.0087
ASP 780.0083
LEU 790.0111
GLU 800.0110
CYS 810.0112
ALA 820.0099
ASP 830.0098
ALA 840.0087
ALA 850.0048
THR 860.0052
TYR 870.0057
TYR 880.0054
CYS 890.0057
CYS 890.0057
GLN 900.0060
THR 910.0081
TYR 920.0112
TYR 930.0144
ALA 940.0109
ILE 950.0112
ILE 960.0114
THR 970.0165
TYR 980.0120
GLY 990.0080
ALA 1000.0059
ALA 1010.0058
PHE 1020.0059
GLY 1030.0079
GLY 1040.0084
GLY 1050.0054
THR 1060.0073
GLU 1070.0063
GLU 1070.0063
VAL 1080.0066
VAL 1090.0082
VAL 1100.0097
LYS 1110.0102
ARG 1120.0042
THR 1130.0101
VAL 1140.0144
ALA 1150.0104
ALA 1160.0090
PRO 1170.0079
SER 1180.0057
SER 1180.0057
VAL 1190.0051
PHE 1200.0047
ILE 1210.0026
PHE 1220.0047
PRO 1230.0079
PRO 1240.0134
SER 1250.0110
ASP 1260.0101
GLU 1270.0081
GLN 1280.0056
LEU 1290.0067
LYS 1300.0220
SER 1310.0192
GLY 1320.0124
THR 1330.0093
ALA 1340.0094
SER 1350.0125
VAL 1360.0071
VAL 1370.0042
CYS 1380.0027
LEU 1390.0037
LEU 1400.0042
ASN 1410.0043
ASN 1420.0057
ASN 1420.0057
PHE 1430.0061
TYR 1440.0051
PRO 1450.0087
ARG 1460.0081
GLU 1470.0111
ALA 1480.0088
LYS 1490.0070
VAL 1500.0057
GLN 1510.0114
TRP 1520.0065
LYS 1530.0087
VAL 1540.0099
ASP 1550.0137
ASN 1560.0172
ALA 1570.0126
LEU 1580.0101
GLN 1590.0085
SER 1600.0576
GLY 1610.0609
ASN 1620.0248
SER 1630.0096
GLN 1640.0093
GLU 1650.0086
SER 1660.0056
SER 1660.0055
VAL 1670.0039
VAL 1670.0039
THR 1680.0030
GLU 1690.0072
GLU 1690.0073
GLN 1700.0065
ASP 1710.0087
SER 1720.0184
LYS 1730.0192
ASP 1740.0133
CYS 1750.0056
THR 1760.0043
TYR 1770.0026
SER 1780.0040
LEU 1790.0044
SER 1800.0049
SER 1810.0046
THR 1820.0044
LEU 1830.0056
THR 1840.0135
LEU 1850.0109
SER 1860.0105
LYS 1870.0106
ALA 1880.0141
ASP 1890.0128
TYR 1900.0105
GLU 1910.0093
LYS 1920.0159
HIS 1930.0096
LYS 1940.0053
LYS 1940.0053
VAL 1950.0050
TYR 1960.0050
ALA 1970.0046
CYS 1980.0044
CYS 1980.0044
GLU 1990.0058
VAL 2000.0061
THR 2010.0055
HIS 2020.0077
GLN 2030.0124
GLY 2040.0135
LEU 2050.0120
SER 2060.0325
SER 2070.0348
PRO 2080.0108
VAL 2090.0072
THR 2100.0064
LYS 2110.0032
SER 2120.0030
PHE 2130.0045
ASN 2140.0041
ARG 2150.0033
GLY 2160.0084
GLU 2170.0157
SER 20.0085
VAL 30.0061
GLU 40.0074
GLU 50.0110
SER 60.0130
GLY 70.0143
GLY 80.0098
ARG 90.0133
LEU 100.0155
VAL 110.0199
THR 120.0219
PRO 130.0189
GLY 140.0148
THR 150.0058
PRO 160.0148
LEU 170.0104
THR 180.0159
LEU 190.0154
THR 200.0126
CYS 210.0090
THR 220.0055
VAL 230.0046
SER 240.0110
GLY 250.0143
PHE 260.0104
SER 270.0123
LEU 280.0102
SER 290.0185
SER 290.0185
ASP 300.0142
TYR 310.0087
ALA 320.0072
MET 330.0064
SER 340.0088
TRP 350.0084
VAL 360.0063
ARG 370.0048
GLN 380.0049
ALA 390.0093
PRO 400.0127
GLY 410.0104
LYS 420.0095
GLY 430.0087
LEU 440.0046
GLU 450.0043
TRP 460.0037
ILE 470.0093
GLY 480.0086
ILE 490.0084
ILE 500.0101
TYR 510.0111
ALA 520.0112
SER 530.0207
GLY 540.0143
SER 550.0172
THR 560.0110
THR 560.0110
TYR 570.0136
TYR 580.0147
ALA 590.0072
SER 600.0068
TRP 610.0083
ALA 620.0114
LYS 630.0104
GLY 640.0168
ARG 650.0152
PHE 660.0133
THR 670.0169
ILE 680.0111
SER 690.0079
LYS 700.0043
THR 710.0071
SER 720.0120
THR 730.0076
THR 740.0033
VAL 750.0065
ASP 760.0111
LEU 770.0153
LYS 780.0174
ILE 790.0130
THR 800.0224
SER 810.0189
PRO 820.0130
THR 830.0223
THR 840.0261
GLU 850.0223
ASP 860.0081
THR 870.0122
ALA 880.0103
THR 890.0065
TYR 900.0061
PHE 910.0085
CYS 920.0086
CYS 920.0085
ALA 930.0073
ARG 940.0056
TYR 950.0046
TYR 960.0026
TYR 960.0026
ALA 970.0042
GLY 980.0048
SER 990.0033
ASP 1000.0046
ILE 1010.0063
ILE 1010.0063
TRP 1020.0065
GLY 1030.0071
PRO 1040.0079
GLY 1050.0075
THR 1060.0088
LEU 1070.0086
LEU 1070.0086
VAL 1080.0092
THR 1090.0114
VAL 1100.0168
SER 1110.0244
SER 1120.0331
ALA 1130.0084
SER 1140.0128
THR 1150.0127
LYS 1160.0139
GLY 1170.0122
PRO 1180.0116
SER 1190.0064
VAL 1200.0040
PHE 1210.0044
PRO 1220.0035
LEU 1230.0048
ALA 1240.0060
PRO 1250.0060
SER 1260.0063
GLY 1330.0210
THR 1340.0106
THR 1340.0104
ALA 1350.0106
ALA 1360.0036
LEU 1370.0031
GLY 1380.0040
CYS 1390.0025
CYS 1390.0025
LEU 1400.0050
VAL 1410.0062
LYS 1420.0094
ASP 1430.0110
TYR 1440.0110
PHE 1450.0091
PRO 1460.0076
GLU 1470.0090
GLU 1470.0091
PRO 1480.0106
VAL 1490.0103
THR 1500.0102
VAL 1510.0033
SER 1520.0060
TRP 1530.0079
ASN 1540.0133
SER 1550.0208
GLY 1560.0234
ALA 1570.0219
LEU 1580.0168
THR 1590.0205
SER 1600.0198
SER 1600.0198
GLY 1610.0148
VAL 1620.0079
HIS 1630.0022
THR 1640.0036
PHE 1650.0037
PRO 1660.0086
ALA 1670.0101
VAL 1680.0108
VAL 1680.0108
LEU 1690.0150
GLN 1700.0154
SER 1710.0208
SER 1720.0203
GLY 1730.0199
LEU 1740.0139
TYR 1750.0107
SER 1760.0096
SER 1760.0096
LEU 1770.0084
SER 1780.0035
SER 1780.0035
SER 1790.0015
VAL 1800.0013
VAL 1810.0057
THR 1820.0048
VAL 1830.0022
PRO 1840.0124
SER 1850.0169
SER 1850.0169
SER 1860.0213
SER 1870.0072
LEU 1880.0033
GLY 1890.0038
THR 1900.0064
GLN 1910.0040
GLN 1910.0040
THR 1920.0040
TYR 1930.0023
ILE 1940.0029
CYS 1950.0034
CYS 1950.0034
ASN 1960.0046
VAL 1970.0054
ASN 1980.0094
ASN 1980.0094
HIS 1990.0115
LYS 2000.0120
PRO 2010.0112
SER 2020.0130
ASN 2030.0120
THR 2040.0107
LYS 2050.0087
VAL 2060.0051
ASP 2070.0048
LYS 2080.0031
LYS 2090.0050
VAL 2100.0054
GLU 2110.0103
PRO 2120.0127
LYS 2130.0179
SER 2140.0762

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.