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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0785
ALA 10.0055
ASP 20.0052
VAL 30.0045
VAL 40.0033
MET 50.0030
THR 60.0033
GLN 70.0025
THR 80.0047
PRO 90.0063
SER 100.0093
SER 100.0093
SER 110.0099
VAL 120.0075
VAL 120.0075
SER 130.0111
SER 130.0111
ALA 140.0126
ALA 150.0151
VAL 160.0135
GLY 170.0111
GLY 180.0094
THR 190.0042
VAL 200.0019
THR 210.0021
THR 210.0020
ILE 220.0023
ASN 230.0033
CYS 240.0032
CYS 240.0032
GLN 250.0046
GLN 250.0046
ALA 260.0041
SER 270.0041
GLN 280.0037
SER 290.0037
ILE 300.0040
SER 310.0019
SER 310.0019
ALA 320.0018
TYR 330.0023
LEU 340.0031
ALA 350.0029
TRP 360.0033
TYR 370.0043
GLN 380.0041
GLN 390.0034
LYS 400.0081
PRO 410.0099
GLY 420.0117
GLN 430.0077
PRO 440.0050
PRO 450.0042
LYS 460.0106
LEU 470.0046
LEU 480.0037
ILE 490.0026
ILE 490.0026
TYR 500.0044
ASP 510.0082
ALA 520.0048
SER 530.0049
ASP 540.0079
LEU 550.0153
ALA 560.0253
SER 570.0461
SER 570.0461
GLY 580.0468
VAL 590.0246
SER 600.0146
SER 610.0149
ARG 620.0137
PHE 630.0103
LYS 640.0082
GLY 650.0053
SER 660.0079
GLY 670.0036
SER 680.0044
GLY 690.0046
THR 700.0048
GLN 710.0049
PHE 720.0044
THR 730.0060
LEU 740.0060
THR 750.0076
ILE 760.0079
SER 770.0098
SER 770.0099
ASP 780.0109
LEU 790.0081
GLU 800.0107
CYS 810.0129
ALA 820.0118
ASP 830.0096
ALA 840.0101
ALA 850.0085
THR 860.0064
TYR 870.0046
TYR 880.0037
CYS 890.0038
CYS 890.0038
GLN 900.0041
THR 910.0035
TYR 920.0039
TYR 930.0040
ALA 940.0057
ILE 950.0053
ILE 960.0061
THR 970.0072
TYR 980.0062
GLY 990.0063
ALA 1000.0048
ALA 1010.0039
PHE 1020.0036
GLY 1030.0019
GLY 1040.0018
GLY 1050.0037
THR 1060.0059
GLU 1070.0090
GLU 1070.0090
VAL 1080.0091
VAL 1090.0111
VAL 1100.0124
LYS 1110.0136
ARG 1120.0087
THR 1130.0106
VAL 1140.0091
ALA 1150.0114
ALA 1160.0131
PRO 1170.0147
SER 1180.0097
SER 1180.0097
VAL 1190.0082
PHE 1200.0074
ILE 1210.0084
PHE 1220.0095
PRO 1230.0126
PRO 1240.0130
SER 1250.0088
ASP 1260.0050
GLU 1270.0043
GLN 1280.0087
LEU 1290.0085
LYS 1300.0101
SER 1310.0138
GLY 1320.0234
THR 1330.0196
ALA 1340.0182
SER 1350.0213
VAL 1360.0141
VAL 1370.0106
CYS 1380.0083
LEU 1390.0071
LEU 1400.0080
ASN 1410.0079
ASN 1420.0100
ASN 1420.0099
PHE 1430.0093
TYR 1440.0072
PRO 1450.0072
ARG 1460.0071
GLU 1470.0071
ALA 1480.0122
LYS 1490.0107
VAL 1500.0077
GLN 1510.0076
TRP 1520.0049
LYS 1530.0085
VAL 1540.0115
ASP 1550.0075
ASN 1560.0107
ALA 1570.0235
LEU 1580.0183
GLN 1590.0151
SER 1600.0268
GLY 1610.0315
ASN 1620.0244
SER 1630.0134
GLN 1640.0080
GLU 1650.0106
SER 1660.0090
SER 1660.0090
VAL 1670.0086
VAL 1670.0087
THR 1680.0070
GLU 1690.0085
GLU 1690.0085
GLN 1700.0067
ASP 1710.0077
SER 1720.0135
LYS 1730.0205
ASP 1740.0160
CYS 1750.0068
THR 1760.0062
TYR 1770.0081
SER 1780.0072
LEU 1790.0075
SER 1800.0073
SER 1810.0106
THR 1820.0134
LEU 1830.0149
THR 1840.0301
LEU 1850.0272
SER 1860.0250
LYS 1870.0258
ALA 1880.0369
ASP 1890.0389
TYR 1900.0253
GLU 1910.0178
LYS 1920.0272
HIS 1930.0140
LYS 1940.0124
LYS 1940.0123
VAL 1950.0159
TYR 1960.0120
ALA 1970.0073
CYS 1980.0062
CYS 1980.0061
GLU 1990.0112
VAL 2000.0127
THR 2010.0145
HIS 2020.0135
GLN 2030.0130
GLY 2040.0150
LEU 2050.0250
SER 2060.0551
SER 2070.0481
PRO 2080.0141
VAL 2090.0128
THR 2100.0126
LYS 2110.0086
SER 2120.0113
PHE 2130.0164
ASN 2140.0171
ARG 2150.0165
GLY 2160.0175
GLU 2170.0285
SER 20.0044
VAL 30.0029
GLU 40.0025
GLU 50.0013
SER 60.0024
GLY 70.0033
GLY 80.0045
ARG 90.0025
LEU 100.0011
VAL 110.0039
THR 120.0041
PRO 130.0039
GLY 140.0065
THR 150.0070
PRO 160.0074
LEU 170.0050
THR 180.0034
LEU 190.0030
THR 200.0009
CYS 210.0010
THR 220.0028
VAL 230.0057
SER 240.0088
GLY 250.0104
PHE 260.0089
SER 270.0088
LEU 280.0057
SER 290.0089
SER 290.0090
ASP 300.0085
TYR 310.0042
ALA 320.0014
MET 330.0015
SER 340.0024
TRP 350.0025
VAL 360.0023
ARG 370.0023
GLN 380.0052
ALA 390.0078
PRO 400.0097
GLY 410.0069
LYS 420.0071
GLY 430.0028
LEU 440.0023
GLU 450.0016
TRP 460.0028
ILE 470.0014
GLY 480.0027
ILE 490.0039
ILE 500.0038
TYR 510.0035
ALA 520.0049
SER 530.0090
GLY 540.0066
SER 550.0068
THR 560.0053
THR 560.0053
TYR 570.0052
TYR 580.0044
ALA 590.0048
SER 600.0069
TRP 610.0054
ALA 620.0041
LYS 630.0067
GLY 640.0073
ARG 650.0049
PHE 660.0013
THR 670.0022
ILE 680.0042
SER 690.0038
LYS 700.0029
THR 710.0050
SER 720.0071
THR 730.0076
THR 740.0030
VAL 750.0019
ASP 760.0034
LEU 770.0022
LYS 780.0023
ILE 790.0034
THR 800.0052
SER 810.0062
PRO 820.0058
THR 830.0062
THR 840.0068
GLU 850.0062
ASP 860.0048
THR 870.0056
ALA 880.0063
THR 890.0043
TYR 900.0033
PHE 910.0034
CYS 920.0017
CYS 920.0017
ALA 930.0013
ARG 940.0013
TYR 950.0007
TYR 960.0014
TYR 960.0014
ALA 970.0024
GLY 980.0018
SER 990.0015
ASP 1000.0012
ILE 1010.0012
ILE 1010.0012
TRP 1020.0019
GLY 1030.0022
PRO 1040.0021
GLY 1050.0022
THR 1060.0030
LEU 1070.0052
LEU 1070.0052
VAL 1080.0046
THR 1090.0040
VAL 1100.0042
SER 1110.0057
SER 1120.0095
ALA 1130.0157
SER 1140.0150
THR 1150.0103
LYS 1160.0030
GLY 1170.0048
PRO 1180.0051
SER 1190.0031
VAL 1200.0043
PHE 1210.0053
PRO 1220.0010
LEU 1230.0012
ALA 1240.0024
PRO 1250.0083
SER 1260.0098
GLY 1330.0043
THR 1340.0080
THR 1340.0081
ALA 1350.0111
ALA 1360.0092
LEU 1370.0083
GLY 1380.0059
CYS 1390.0030
CYS 1390.0029
LEU 1400.0032
VAL 1410.0030
LYS 1420.0074
ASP 1430.0046
TYR 1440.0024
PHE 1450.0023
PRO 1460.0027
GLU 1470.0025
GLU 1470.0025
PRO 1480.0042
VAL 1490.0043
THR 1500.0048
VAL 1510.0022
SER 1520.0024
TRP 1530.0057
ASN 1540.0100
SER 1550.0050
GLY 1560.0104
ALA 1570.0194
LEU 1580.0184
THR 1590.0194
SER 1600.0313
SER 1600.0313
GLY 1610.0204
VAL 1620.0075
HIS 1630.0032
THR 1640.0024
PHE 1650.0050
PRO 1660.0068
ALA 1670.0050
VAL 1680.0046
VAL 1680.0046
LEU 1690.0061
GLN 1700.0094
SER 1710.0174
SER 1720.0200
GLY 1730.0155
LEU 1740.0060
TYR 1750.0021
SER 1760.0036
SER 1760.0037
LEU 1770.0051
SER 1780.0035
SER 1780.0035
SER 1790.0023
VAL 1800.0041
VAL 1810.0151
THR 1820.0150
VAL 1830.0145
PRO 1840.0166
SER 1850.0125
SER 1850.0125
SER 1860.0297
SER 1870.0160
LEU 1880.0073
GLY 1890.0202
THR 1900.0254
GLN 1910.0121
GLN 1910.0121
THR 1920.0121
TYR 1930.0119
ILE 1940.0097
CYS 1950.0076
CYS 1950.0076
ASN 1960.0063
VAL 1970.0067
ASN 1980.0067
ASN 1980.0067
HIS 1990.0075
LYS 2000.0092
PRO 2010.0080
SER 2020.0111
ASN 2030.0148
THR 2040.0131
LYS 2050.0094
VAL 2060.0094
ASP 2070.0095
LYS 2080.0040
LYS 2090.0081
VAL 2100.0096
GLU 2110.0127
PRO 2120.0122
LYS 2130.0132
SER 2140.0785

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.