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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0967
ALA 10.0222
ASP 20.0141
VAL 30.0117
VAL 40.0097
MET 50.0068
THR 60.0056
GLN 70.0056
THR 80.0141
PRO 90.0194
SER 100.0233
SER 100.0234
SER 110.0202
VAL 120.0138
VAL 120.0136
SER 130.0150
SER 130.0151
ALA 140.0160
ALA 150.0204
VAL 160.0196
GLY 170.0183
GLY 180.0117
THR 190.0045
VAL 200.0034
THR 210.0085
THR 210.0088
ILE 220.0059
ASN 230.0066
CYS 240.0021
CYS 240.0021
GLN 250.0074
GLN 250.0073
ALA 260.0100
SER 270.0130
GLN 280.0114
SER 290.0092
ILE 300.0080
SER 310.0059
SER 310.0059
ALA 320.0053
TYR 330.0063
LEU 340.0057
ALA 350.0053
TRP 360.0047
TYR 370.0025
GLN 380.0042
GLN 390.0094
LYS 400.0347
PRO 410.0665
GLY 420.0967
GLN 430.0579
PRO 440.0249
PRO 450.0111
LYS 460.0097
LEU 470.0055
LEU 480.0053
ILE 490.0036
ILE 490.0036
TYR 500.0017
ASP 510.0056
ALA 520.0044
SER 530.0016
ASP 540.0032
LEU 550.0055
ALA 560.0194
SER 570.0356
SER 570.0356
GLY 580.0340
VAL 590.0215
SER 600.0232
SER 610.0272
ARG 620.0202
PHE 630.0156
LYS 640.0145
GLY 650.0105
SER 660.0130
GLY 670.0052
SER 680.0062
GLY 690.0078
THR 700.0094
GLN 710.0059
PHE 720.0026
THR 730.0102
LEU 740.0084
THR 750.0104
ILE 760.0086
SER 770.0125
SER 770.0126
ASP 780.0155
LEU 790.0144
GLU 800.0166
CYS 810.0169
ALA 820.0157
ASP 830.0129
ALA 840.0100
ALA 850.0058
THR 860.0056
TYR 870.0058
TYR 880.0078
CYS 890.0075
CYS 890.0075
GLN 900.0080
THR 910.0067
TYR 920.0074
TYR 930.0072
ALA 940.0129
ILE 950.0062
ILE 960.0134
THR 970.0165
TYR 980.0083
GLY 990.0049
ALA 1000.0085
ALA 1010.0087
PHE 1020.0096
GLY 1030.0074
GLY 1040.0083
GLY 1050.0094
THR 1060.0115
GLU 1070.0142
GLU 1070.0141
VAL 1080.0124
VAL 1090.0161
VAL 1100.0174
LYS 1110.0198
ARG 1120.0083
THR 1130.0153
VAL 1140.0191
ALA 1150.0145
ALA 1160.0112
PRO 1170.0081
SER 1180.0018
SER 1180.0018
VAL 1190.0024
PHE 1200.0047
ILE 1210.0050
PHE 1220.0056
PRO 1230.0067
PRO 1240.0061
SER 1250.0047
ASP 1260.0035
GLU 1270.0034
GLN 1280.0050
LEU 1290.0042
LYS 1300.0050
SER 1310.0084
GLY 1320.0114
THR 1330.0089
ALA 1340.0075
SER 1350.0085
VAL 1360.0057
VAL 1370.0051
CYS 1380.0045
LEU 1390.0023
LEU 1400.0019
ASN 1410.0030
ASN 1420.0084
ASN 1420.0083
PHE 1430.0075
TYR 1440.0066
PRO 1450.0094
ARG 1460.0053
GLU 1470.0052
ALA 1480.0037
LYS 1490.0022
VAL 1500.0008
GLN 1510.0050
TRP 1520.0017
LYS 1530.0028
VAL 1540.0033
ASP 1550.0042
ASN 1560.0085
ALA 1570.0113
LEU 1580.0099
GLN 1590.0063
SER 1600.0026
GLY 1610.0039
ASN 1620.0070
SER 1630.0035
GLN 1640.0029
GLU 1650.0032
SER 1660.0030
SER 1660.0031
VAL 1670.0054
VAL 1670.0054
THR 1680.0074
GLU 1690.0139
GLU 1690.0136
GLN 1700.0098
ASP 1710.0055
SER 1720.0077
LYS 1730.0065
ASP 1740.0075
CYS 1750.0069
THR 1760.0083
TYR 1770.0093
SER 1780.0053
LEU 1790.0033
SER 1800.0019
SER 1810.0045
THR 1820.0051
LEU 1830.0052
THR 1840.0120
LEU 1850.0111
SER 1860.0115
LYS 1870.0115
ALA 1880.0161
ASP 1890.0156
TYR 1900.0103
GLU 1910.0083
LYS 1920.0104
HIS 1930.0064
LYS 1940.0050
LYS 1940.0050
VAL 1950.0050
TYR 1960.0040
ALA 1970.0037
CYS 1980.0044
CYS 1980.0043
GLU 1990.0053
VAL 2000.0013
THR 2010.0026
HIS 2020.0067
GLN 2030.0153
GLY 2040.0178
LEU 2050.0055
SER 2060.0033
SER 2070.0138
PRO 2080.0072
VAL 2090.0066
THR 2100.0077
LYS 2110.0067
SER 2120.0060
PHE 2130.0071
ASN 2140.0051
ARG 2150.0061
GLY 2160.0059
GLU 2170.0101
SER 20.0054
VAL 30.0055
GLU 40.0066
GLU 50.0070
SER 60.0069
GLY 70.0066
GLY 80.0037
ARG 90.0037
LEU 100.0038
VAL 110.0052
THR 120.0049
PRO 130.0031
GLY 140.0034
THR 150.0045
PRO 160.0050
LEU 170.0044
THR 180.0058
LEU 190.0075
THR 200.0101
CYS 210.0085
THR 220.0079
VAL 230.0088
SER 240.0092
GLY 250.0091
PHE 260.0083
SER 270.0092
LEU 280.0066
SER 290.0086
SER 290.0087
ASP 300.0063
TYR 310.0007
ALA 320.0063
MET 330.0061
SER 340.0064
TRP 350.0076
VAL 360.0074
ARG 370.0065
GLN 380.0102
ALA 390.0175
PRO 400.0229
GLY 410.0346
LYS 420.0390
GLY 430.0377
LEU 440.0110
GLU 450.0102
TRP 460.0099
ILE 470.0069
GLY 480.0054
ILE 490.0064
ILE 500.0072
TYR 510.0104
ALA 520.0108
SER 530.0298
GLY 540.0219
SER 550.0176
THR 560.0085
THR 560.0085
TYR 570.0052
TYR 580.0044
ALA 590.0104
SER 600.0193
TRP 610.0204
ALA 620.0156
LYS 630.0175
GLY 640.0197
ARG 650.0126
PHE 660.0062
THR 670.0047
ILE 680.0086
SER 690.0089
LYS 700.0079
THR 710.0185
SER 720.0174
THR 730.0151
THR 740.0098
VAL 750.0095
ASP 760.0121
LEU 770.0069
LYS 780.0035
ILE 790.0017
THR 800.0062
SER 810.0058
PRO 820.0036
THR 830.0042
THR 840.0061
GLU 850.0072
ASP 860.0015
THR 870.0018
ALA 880.0026
THR 890.0046
TYR 900.0053
PHE 910.0070
CYS 920.0072
CYS 920.0072
ALA 930.0055
ARG 940.0043
TYR 950.0025
TYR 960.0033
TYR 960.0033
ALA 970.0031
GLY 980.0030
SER 990.0026
ASP 1000.0040
ILE 1010.0056
ILE 1010.0056
TRP 1020.0047
GLY 1030.0047
PRO 1040.0072
GLY 1050.0070
THR 1060.0071
LEU 1070.0031
LEU 1070.0031
VAL 1080.0031
THR 1090.0033
VAL 1100.0045
SER 1110.0074
SER 1120.0099
ALA 1130.0076
SER 1140.0061
THR 1150.0037
LYS 1160.0018
GLY 1170.0011
PRO 1180.0009
SER 1190.0012
VAL 1200.0012
PHE 1210.0015
PRO 1220.0029
LEU 1230.0029
ALA 1240.0029
PRO 1250.0037
SER 1260.0044
GLY 1330.0030
THR 1340.0018
THR 1340.0018
ALA 1350.0010
ALA 1360.0016
LEU 1370.0021
GLY 1380.0027
CYS 1390.0021
CYS 1390.0021
LEU 1400.0020
VAL 1410.0023
LYS 1420.0004
ASP 1430.0012
TYR 1440.0010
PHE 1450.0006
PRO 1460.0009
GLU 1470.0023
GLU 1470.0023
PRO 1480.0016
VAL 1490.0018
THR 1500.0038
VAL 1510.0047
SER 1520.0041
TRP 1530.0031
ASN 1540.0054
SER 1550.0069
GLY 1560.0117
ALA 1570.0179
LEU 1580.0126
THR 1590.0175
SER 1600.0143
SER 1600.0143
GLY 1610.0085
VAL 1620.0083
HIS 1630.0044
THR 1640.0048
PHE 1650.0045
PRO 1660.0036
ALA 1670.0025
VAL 1680.0015
VAL 1680.0015
LEU 1690.0031
GLN 1700.0044
SER 1710.0069
SER 1720.0059
GLY 1730.0043
LEU 1740.0025
TYR 1750.0007
SER 1760.0016
SER 1760.0016
LEU 1770.0020
SER 1780.0034
SER 1780.0034
SER 1790.0033
VAL 1800.0028
VAL 1810.0019
THR 1820.0008
VAL 1830.0010
PRO 1840.0022
SER 1850.0020
SER 1850.0020
SER 1860.0045
SER 1870.0046
LEU 1880.0045
GLY 1890.0065
THR 1900.0093
GLN 1910.0049
GLN 1910.0049
THR 1920.0033
TYR 1930.0013
ILE 1940.0012
CYS 1950.0019
CYS 1950.0019
ASN 1960.0021
VAL 1970.0016
ASN 1980.0022
ASN 1980.0022
HIS 1990.0016
LYS 2000.0043
PRO 2010.0033
SER 2020.0040
ASN 2030.0066
THR 2040.0034
LYS 2050.0036
VAL 2060.0013
ASP 2070.0008
LYS 2080.0015
LYS 2090.0017
VAL 2100.0020
GLU 2110.0040
PRO 2120.0041
LYS 2130.0041
SER 2140.0125

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.