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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0688
ALA 10.0198
ASP 20.0134
VAL 30.0107
VAL 40.0106
MET 50.0070
THR 60.0065
GLN 70.0043
THR 80.0043
PRO 90.0049
SER 100.0074
SER 100.0074
SER 110.0079
VAL 120.0068
VAL 120.0068
SER 130.0066
SER 130.0066
ALA 140.0067
ALA 150.0066
VAL 160.0052
GLY 170.0055
GLY 180.0065
THR 190.0066
VAL 200.0050
THR 210.0037
THR 210.0036
ILE 220.0017
ASN 230.0023
CYS 240.0044
CYS 240.0043
GLN 250.0032
GLN 250.0032
ALA 260.0047
SER 270.0093
GLN 280.0078
SER 290.0047
ILE 300.0018
SER 310.0053
SER 310.0053
ALA 320.0077
TYR 330.0083
LEU 340.0073
ALA 350.0070
TRP 360.0054
TYR 370.0030
GLN 380.0030
GLN 390.0092
LYS 400.0255
PRO 410.0458
GLY 420.0640
GLN 430.0379
PRO 440.0162
PRO 450.0056
LYS 460.0045
LEU 470.0041
LEU 480.0024
ILE 490.0058
ILE 490.0059
TYR 500.0084
ASP 510.0092
ALA 520.0070
SER 530.0075
ASP 540.0103
LEU 550.0075
ALA 560.0128
SER 570.0192
SER 570.0193
GLY 580.0149
VAL 590.0091
SER 600.0114
SER 610.0128
ARG 620.0123
PHE 630.0072
LYS 640.0044
GLY 650.0032
SER 660.0070
GLY 670.0044
SER 680.0049
GLY 690.0032
THR 700.0024
GLN 710.0016
PHE 720.0033
THR 730.0023
LEU 740.0022
THR 750.0045
ILE 760.0073
SER 770.0093
SER 770.0093
ASP 780.0115
LEU 790.0064
GLU 800.0057
CYS 810.0062
ALA 820.0085
ASP 830.0079
ALA 840.0075
ALA 850.0102
THR 860.0085
TYR 870.0043
TYR 880.0027
CYS 890.0053
CYS 890.0054
GLN 900.0078
THR 910.0084
TYR 920.0085
TYR 930.0044
ALA 940.0029
ILE 950.0027
ILE 960.0055
THR 970.0110
TYR 980.0087
GLY 990.0093
ALA 1000.0089
ALA 1010.0083
PHE 1020.0074
GLY 1030.0065
GLY 1040.0061
GLY 1050.0032
THR 1060.0055
GLU 1070.0074
GLU 1070.0074
VAL 1080.0073
VAL 1090.0042
VAL 1100.0042
LYS 1110.0046
ARG 1120.0139
THR 1130.0120
VAL 1140.0093
ALA 1150.0054
ALA 1160.0054
PRO 1170.0106
SER 1180.0086
SER 1180.0086
VAL 1190.0099
PHE 1200.0066
ILE 1210.0035
PHE 1220.0058
PRO 1230.0094
PRO 1240.0126
SER 1250.0119
ASP 1260.0079
GLU 1270.0067
GLN 1280.0082
LEU 1290.0055
LYS 1300.0171
SER 1310.0175
GLY 1320.0142
THR 1330.0106
ALA 1340.0095
SER 1350.0117
VAL 1360.0052
VAL 1370.0021
CYS 1380.0046
LEU 1390.0057
LEU 1400.0079
ASN 1410.0045
ASN 1420.0059
ASN 1420.0060
PHE 1430.0051
TYR 1440.0075
PRO 1450.0120
ARG 1460.0171
GLU 1470.0209
ALA 1480.0232
LYS 1490.0285
VAL 1500.0226
GLN 1510.0113
TRP 1520.0045
LYS 1530.0066
VAL 1540.0110
ASP 1550.0144
ASN 1560.0251
ALA 1570.0248
LEU 1580.0217
GLN 1590.0198
SER 1600.0262
GLY 1610.0311
ASN 1620.0233
SER 1630.0119
GLN 1640.0083
GLU 1650.0099
SER 1660.0100
SER 1660.0102
VAL 1670.0108
VAL 1670.0108
THR 1680.0114
GLU 1690.0133
GLU 1690.0134
GLN 1700.0124
ASP 1710.0135
SER 1720.0203
LYS 1730.0255
ASP 1740.0178
CYS 1750.0141
THR 1760.0112
TYR 1770.0121
SER 1780.0063
LEU 1790.0077
SER 1800.0062
SER 1810.0058
THR 1820.0045
LEU 1830.0056
THR 1840.0140
LEU 1850.0124
SER 1860.0141
LYS 1870.0136
ALA 1880.0164
ASP 1890.0138
TYR 1900.0103
GLU 1910.0082
LYS 1920.0108
HIS 1930.0048
LYS 1940.0069
LYS 1940.0068
VAL 1950.0093
TYR 1960.0019
ALA 1970.0044
CYS 1980.0087
CYS 1980.0087
GLU 1990.0245
VAL 2000.0241
THR 2010.0271
HIS 2020.0123
GLN 2030.0027
GLY 2040.0114
LEU 2050.0273
SER 2060.0688
SER 2070.0485
PRO 2080.0298
VAL 2090.0264
THR 2100.0241
LYS 2110.0119
SER 2120.0076
PHE 2130.0090
ASN 2140.0114
ARG 2150.0106
GLY 2160.0152
GLU 2170.0281
SER 20.0016
VAL 30.0018
GLU 40.0025
GLU 50.0009
SER 60.0008
GLY 70.0004
GLY 80.0033
ARG 90.0032
LEU 100.0039
VAL 110.0053
THR 120.0059
PRO 130.0066
GLY 140.0077
THR 150.0056
PRO 160.0041
LEU 170.0029
THR 180.0023
LEU 190.0021
THR 200.0020
CYS 210.0018
THR 220.0026
VAL 230.0020
SER 240.0023
GLY 250.0029
PHE 260.0032
SER 270.0026
LEU 280.0017
SER 290.0049
SER 290.0049
ASP 300.0033
TYR 310.0014
ALA 320.0018
MET 330.0024
SER 340.0032
TRP 350.0014
VAL 360.0010
ARG 370.0010
GLN 380.0055
ALA 390.0053
PRO 400.0048
GLY 410.0111
LYS 420.0062
GLY 430.0093
LEU 440.0013
GLU 450.0016
TRP 460.0025
ILE 470.0033
GLY 480.0026
ILE 490.0018
ILE 500.0020
TYR 510.0029
ALA 520.0051
SER 530.0115
GLY 540.0095
SER 550.0083
THR 560.0050
THR 560.0050
TYR 570.0049
TYR 580.0059
ALA 590.0075
SER 600.0114
TRP 610.0107
ALA 620.0073
LYS 630.0087
GLY 640.0072
ARG 650.0023
PHE 660.0011
THR 670.0012
ILE 680.0028
SER 690.0025
LYS 700.0017
THR 710.0024
SER 720.0014
THR 730.0012
THR 740.0022
VAL 750.0016
ASP 760.0019
LEU 770.0016
LYS 780.0023
ILE 790.0031
THR 800.0052
SER 810.0067
PRO 820.0064
THR 830.0086
THR 840.0086
GLU 850.0063
ASP 860.0044
THR 870.0045
ALA 880.0041
THR 890.0035
TYR 900.0026
PHE 910.0019
CYS 920.0026
CYS 920.0026
ALA 930.0029
ARG 940.0030
TYR 950.0072
TYR 960.0082
TYR 960.0082
ALA 970.0093
GLY 980.0085
SER 990.0065
ASP 1000.0050
ILE 1010.0023
ILE 1010.0023
TRP 1020.0019
GLY 1030.0021
PRO 1040.0043
GLY 1050.0032
THR 1060.0027
LEU 1070.0023
LEU 1070.0023
VAL 1080.0021
THR 1090.0019
VAL 1100.0052
SER 1110.0058
SER 1120.0075
ALA 1130.0081
SER 1140.0070
THR 1150.0056
LYS 1160.0031
GLY 1170.0023
PRO 1180.0048
SER 1190.0060
VAL 1200.0070
PHE 1210.0071
PRO 1220.0088
LEU 1230.0081
ALA 1240.0088
PRO 1250.0072
SER 1260.0073
GLY 1330.0106
THR 1340.0059
THR 1340.0059
ALA 1350.0010
ALA 1360.0034
LEU 1370.0054
GLY 1380.0078
CYS 1390.0080
CYS 1390.0080
LEU 1400.0070
VAL 1410.0073
LYS 1420.0053
ASP 1430.0043
TYR 1440.0036
PHE 1450.0030
PRO 1460.0030
GLU 1470.0032
GLU 1470.0032
PRO 1480.0046
VAL 1490.0039
THR 1500.0067
VAL 1510.0120
SER 1520.0093
TRP 1530.0062
ASN 1540.0115
SER 1550.0169
GLY 1560.0311
ALA 1570.0491
LEU 1580.0327
THR 1590.0433
SER 1600.0341
SER 1600.0342
GLY 1610.0187
VAL 1620.0179
HIS 1630.0045
THR 1640.0060
PHE 1650.0041
PRO 1660.0097
ALA 1670.0084
VAL 1680.0077
VAL 1680.0077
LEU 1690.0080
GLN 1700.0097
SER 1710.0123
SER 1720.0118
GLY 1730.0092
LEU 1740.0059
TYR 1750.0045
SER 1760.0047
SER 1760.0047
LEU 1770.0063
SER 1780.0072
SER 1780.0072
SER 1790.0079
VAL 1800.0075
VAL 1810.0051
THR 1820.0030
VAL 1830.0041
PRO 1840.0073
SER 1850.0037
SER 1850.0037
SER 1860.0082
SER 1870.0109
LEU 1880.0096
GLY 1890.0146
THR 1900.0248
GLN 1910.0146
GLN 1910.0144
THR 1920.0114
TYR 1930.0013
ILE 1940.0034
CYS 1950.0065
CYS 1950.0065
ASN 1960.0074
VAL 1970.0068
ASN 1980.0047
ASN 1980.0048
HIS 1990.0034
LYS 2000.0076
PRO 2010.0083
SER 2020.0087
ASN 2030.0109
THR 2040.0048
LYS 2050.0054
VAL 2060.0063
ASP 2070.0078
LYS 2080.0080
LYS 2090.0081
VAL 2100.0079
GLU 2110.0113
PRO 2120.0108
LYS 2130.0136
SER 2140.0219

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.