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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 52  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0371
ALA 10.0239
ASP 20.0196
VAL 30.0161
VAL 40.0103
MET 50.0086
THR 60.0106
GLN 70.0047
THR 80.0038
PRO 90.0034
SER 100.0039
SER 100.0039
SER 110.0034
VAL 120.0048
VAL 120.0049
SER 130.0096
SER 130.0097
ALA 140.0140
ALA 150.0189
VAL 160.0192
GLY 170.0198
GLY 180.0129
THR 190.0063
VAL 200.0056
THR 210.0058
THR 210.0057
ILE 220.0031
ASN 230.0033
CYS 240.0044
CYS 240.0044
GLN 250.0072
GLN 250.0072
ALA 260.0036
SER 270.0047
GLN 280.0073
SER 290.0059
ILE 300.0041
SER 310.0047
SER 310.0047
ALA 320.0043
TYR 330.0037
LEU 340.0034
ALA 350.0031
TRP 360.0027
TYR 370.0021
GLN 380.0017
GLN 390.0020
LYS 400.0113
PRO 410.0224
GLY 420.0279
GLN 430.0170
PRO 440.0080
PRO 450.0046
LYS 460.0066
LEU 470.0026
LEU 480.0023
ILE 490.0024
ILE 490.0024
TYR 500.0049
ASP 510.0088
ALA 520.0065
SER 530.0050
ASP 540.0041
LEU 550.0096
ALA 560.0155
SER 570.0319
SER 570.0319
GLY 580.0324
VAL 590.0155
SER 600.0124
SER 610.0165
ARG 620.0130
PHE 630.0120
LYS 640.0108
GLY 650.0090
SER 660.0107
GLY 670.0099
SER 680.0084
GLY 690.0069
THR 700.0044
GLN 710.0065
PHE 720.0059
THR 730.0079
LEU 740.0078
THR 750.0087
ILE 760.0096
SER 770.0102
SER 770.0103
ASP 780.0119
LEU 790.0156
GLU 800.0169
CYS 810.0153
ALA 820.0127
ASP 830.0111
ALA 840.0099
ALA 850.0068
THR 860.0046
TYR 870.0045
TYR 880.0055
CYS 890.0047
CYS 890.0046
GLN 900.0047
THR 910.0094
TYR 920.0083
TYR 930.0065
ALA 940.0140
ILE 950.0136
ILE 960.0159
THR 970.0183
TYR 980.0177
GLY 990.0204
ALA 1000.0114
ALA 1010.0094
PHE 1020.0096
GLY 1030.0042
GLY 1040.0051
GLY 1050.0065
THR 1060.0051
GLU 1070.0054
GLU 1070.0054
VAL 1080.0073
VAL 1090.0096
VAL 1100.0129
LYS 1110.0137
ARG 1120.0101
THR 1130.0112
VAL 1140.0108
ALA 1150.0108
ALA 1160.0110
PRO 1170.0111
SER 1180.0080
SER 1180.0080
VAL 1190.0072
PHE 1200.0064
ILE 1210.0042
PHE 1220.0036
PRO 1230.0036
PRO 1240.0057
SER 1250.0056
ASP 1260.0079
GLU 1270.0074
GLN 1280.0056
LEU 1290.0080
LYS 1300.0145
SER 1310.0056
GLY 1320.0160
THR 1330.0073
ALA 1340.0047
SER 1350.0029
VAL 1360.0034
VAL 1370.0034
CYS 1380.0044
LEU 1390.0076
LEU 1400.0074
ASN 1410.0072
ASN 1420.0090
ASN 1420.0090
PHE 1430.0084
TYR 1440.0069
PRO 1450.0087
ARG 1460.0078
GLU 1470.0078
ALA 1480.0112
LYS 1490.0098
VAL 1500.0082
GLN 1510.0083
TRP 1520.0071
LYS 1530.0107
VAL 1540.0093
ASP 1550.0174
ASN 1560.0249
ALA 1570.0213
LEU 1580.0155
GLN 1590.0105
SER 1600.0078
GLY 1610.0053
ASN 1620.0041
SER 1630.0041
GLN 1640.0050
GLU 1650.0065
SER 1660.0048
SER 1660.0047
VAL 1670.0048
VAL 1670.0048
THR 1680.0062
GLU 1690.0056
GLU 1690.0055
GLN 1700.0046
ASP 1710.0029
SER 1720.0104
LYS 1730.0104
ASP 1740.0084
CYS 1750.0047
THR 1760.0036
TYR 1770.0057
SER 1780.0068
LEU 1790.0061
SER 1800.0061
SER 1810.0038
THR 1820.0037
LEU 1830.0041
THR 1840.0050
LEU 1850.0049
SER 1860.0092
LYS 1870.0113
ALA 1880.0159
ASP 1890.0112
TYR 1900.0025
GLU 1910.0052
LYS 1920.0042
HIS 1930.0079
LYS 1940.0036
LYS 1940.0036
VAL 1950.0032
TYR 1960.0037
ALA 1970.0030
CYS 1980.0039
CYS 1980.0039
GLU 1990.0053
VAL 2000.0081
THR 2010.0111
HIS 2020.0136
GLN 2030.0131
GLY 2040.0118
LEU 2050.0203
SER 2060.0290
SER 2070.0236
PRO 2080.0129
VAL 2090.0095
THR 2100.0073
LYS 2110.0050
SER 2120.0045
PHE 2130.0042
ASN 2140.0064
ARG 2150.0062
GLY 2160.0116
GLU 2170.0271
SER 20.0205
VAL 30.0137
GLU 40.0122
GLU 50.0072
SER 60.0115
GLY 70.0151
GLY 80.0167
ARG 90.0125
LEU 100.0132
VAL 110.0135
THR 120.0172
PRO 130.0242
GLY 140.0167
THR 150.0126
PRO 160.0147
LEU 170.0132
THR 180.0129
LEU 190.0144
THR 200.0114
CYS 210.0063
THR 220.0053
VAL 230.0153
SER 240.0252
GLY 250.0336
PHE 260.0223
SER 270.0178
LEU 280.0133
SER 290.0142
SER 290.0143
ASP 300.0184
TYR 310.0157
ALA 320.0053
MET 330.0063
SER 340.0089
TRP 350.0092
VAL 360.0087
ARG 370.0080
GLN 380.0129
ALA 390.0140
PRO 400.0198
GLY 410.0246
LYS 420.0238
GLY 430.0262
LEU 440.0104
GLU 450.0063
TRP 460.0086
ILE 470.0071
GLY 480.0106
ILE 490.0141
ILE 500.0137
TYR 510.0100
ALA 520.0083
SER 530.0106
GLY 540.0115
SER 550.0128
THR 560.0198
THR 560.0198
TYR 570.0209
TYR 580.0192
ALA 590.0151
SER 600.0206
TRP 610.0169
ALA 620.0144
LYS 630.0289
GLY 640.0339
ARG 650.0160
PHE 660.0064
THR 670.0145
ILE 680.0129
SER 690.0095
LYS 700.0057
THR 710.0104
SER 720.0117
THR 730.0068
THR 740.0029
VAL 750.0058
ASP 760.0120
LEU 770.0120
LYS 780.0098
ILE 790.0096
THR 800.0092
SER 810.0097
PRO 820.0162
THR 830.0246
THR 840.0262
GLU 850.0261
ASP 860.0169
THR 870.0185
ALA 880.0193
THR 890.0084
TYR 900.0084
PHE 910.0076
CYS 920.0076
CYS 920.0076
ALA 930.0077
ARG 940.0083
TYR 950.0121
TYR 960.0130
TYR 960.0129
ALA 970.0118
GLY 980.0087
SER 990.0094
ASP 1000.0116
ILE 1010.0120
ILE 1010.0120
TRP 1020.0102
GLY 1030.0116
PRO 1040.0064
GLY 1050.0053
THR 1060.0092
LEU 1070.0150
LEU 1070.0150
VAL 1080.0158
THR 1090.0146
VAL 1100.0212
SER 1110.0209
SER 1120.0246
ALA 1130.0258
SER 1140.0241
THR 1150.0164
LYS 1160.0098
GLY 1170.0091
PRO 1180.0083
SER 1190.0037
VAL 1200.0058
PHE 1210.0066
PRO 1220.0060
LEU 1230.0070
ALA 1240.0081
PRO 1250.0090
SER 1260.0085
GLY 1330.0189
THR 1340.0142
THR 1340.0143
ALA 1350.0074
ALA 1360.0070
LEU 1370.0065
GLY 1380.0079
CYS 1390.0062
CYS 1390.0062
LEU 1400.0051
VAL 1410.0038
LYS 1420.0043
ASP 1430.0046
TYR 1440.0046
PHE 1450.0090
PRO 1460.0083
GLU 1470.0069
GLU 1470.0069
PRO 1480.0040
VAL 1490.0040
THR 1500.0029
VAL 1510.0028
SER 1520.0028
TRP 1530.0043
ASN 1540.0048
SER 1550.0049
GLY 1560.0042
ALA 1570.0092
LEU 1580.0081
THR 1590.0147
SER 1600.0109
SER 1600.0110
GLY 1610.0076
VAL 1620.0088
HIS 1630.0073
THR 1640.0072
PHE 1650.0058
PRO 1660.0131
ALA 1670.0117
VAL 1680.0112
VAL 1680.0111
LEU 1690.0230
GLN 1700.0242
SER 1710.0371
SER 1720.0322
GLY 1730.0240
LEU 1740.0126
TYR 1750.0064
SER 1760.0055
SER 1760.0054
LEU 1770.0062
SER 1780.0054
SER 1780.0054
SER 1790.0058
VAL 1800.0059
VAL 1810.0097
THR 1820.0089
VAL 1830.0080
PRO 1840.0148
SER 1850.0114
SER 1850.0114
SER 1860.0119
SER 1870.0065
LEU 1880.0045
GLY 1890.0041
THR 1900.0071
GLN 1910.0045
GLN 1910.0045
THR 1920.0059
TYR 1930.0050
ILE 1940.0061
CYS 1950.0067
CYS 1950.0067
ASN 1960.0059
VAL 1970.0061
ASN 1980.0062
ASN 1980.0062
HIS 1990.0066
LYS 2000.0052
PRO 2010.0076
SER 2020.0122
ASN 2030.0112
THR 2040.0118
LYS 2050.0139
VAL 2060.0127
ASP 2070.0110
LYS 2080.0086
LYS 2090.0093
VAL 2100.0101
GLU 2110.0118
PRO 2120.0133
LYS 2130.0147
SER 2140.0148

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.