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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
ALA 10.0260
ASP 20.0199
VAL 30.0127
VAL 40.0068
MET 50.0035
THR 60.0052
GLN 70.0057
THR 80.0053
PRO 90.0053
SER 100.0063
SER 100.0063
SER 110.0049
VAL 120.0035
VAL 120.0036
SER 130.0058
SER 130.0058
ALA 140.0109
ALA 150.0141
VAL 160.0157
GLY 170.0188
GLY 180.0144
THR 190.0081
VAL 200.0038
THR 210.0033
THR 210.0034
ILE 220.0048
ASN 230.0052
CYS 240.0065
CYS 240.0065
GLN 250.0067
GLN 250.0066
ALA 260.0036
SER 270.0089
GLN 280.0112
SER 290.0101
ILE 300.0052
SER 310.0035
SER 310.0035
ALA 320.0059
TYR 330.0069
LEU 340.0078
ALA 350.0074
TRP 360.0064
TYR 370.0034
GLN 380.0020
GLN 390.0039
LYS 400.0173
PRO 410.0334
GLY 420.0434
GLN 430.0259
PRO 440.0129
PRO 450.0080
LYS 460.0090
LEU 470.0064
LEU 480.0055
ILE 490.0085
ILE 490.0085
TYR 500.0106
ASP 510.0133
ALA 520.0103
SER 530.0133
ASP 540.0164
LEU 550.0089
ALA 560.0095
SER 570.0188
SER 570.0188
GLY 580.0277
VAL 590.0158
SER 600.0143
SER 610.0071
ARG 620.0085
PHE 630.0038
LYS 640.0079
GLY 650.0090
SER 660.0111
GLY 670.0102
SER 680.0062
GLY 690.0056
THR 700.0073
GLN 710.0090
PHE 720.0098
THR 730.0071
LEU 740.0059
THR 750.0052
ILE 760.0039
SER 770.0083
SER 770.0083
ASP 780.0139
LEU 790.0133
GLU 800.0137
CYS 810.0116
ALA 820.0099
ASP 830.0094
ALA 840.0089
ALA 850.0074
THR 860.0059
TYR 870.0050
TYR 880.0031
CYS 890.0034
CYS 890.0034
GLN 900.0044
THR 910.0067
TYR 920.0084
TYR 930.0053
ALA 940.0050
ILE 950.0085
ILE 960.0100
THR 970.0195
TYR 980.0156
GLY 990.0166
ALA 1000.0075
ALA 1010.0061
PHE 1020.0052
GLY 1030.0028
GLY 1040.0041
GLY 1050.0041
THR 1060.0062
GLU 1070.0066
GLU 1070.0066
VAL 1080.0066
VAL 1090.0051
VAL 1100.0081
LYS 1110.0092
ARG 1120.0082
THR 1130.0113
VAL 1140.0121
ALA 1150.0086
ALA 1160.0078
PRO 1170.0084
SER 1180.0076
SER 1180.0077
VAL 1190.0107
PHE 1200.0153
ILE 1210.0120
PHE 1220.0121
PRO 1230.0117
PRO 1240.0117
SER 1250.0150
ASP 1260.0164
GLU 1270.0224
GLN 1280.0174
LEU 1290.0164
LYS 1300.0298
SER 1310.0177
GLY 1320.0192
THR 1330.0099
ALA 1340.0100
SER 1350.0097
VAL 1360.0111
VAL 1370.0113
CYS 1380.0105
LEU 1390.0109
LEU 1400.0081
ASN 1410.0081
ASN 1420.0086
ASN 1420.0086
PHE 1430.0089
TYR 1440.0092
PRO 1450.0118
ARG 1460.0127
GLU 1470.0134
ALA 1480.0082
LYS 1490.0091
VAL 1500.0043
GLN 1510.0133
TRP 1520.0090
LYS 1530.0163
VAL 1540.0102
ASP 1550.0178
ASN 1560.0158
ALA 1570.0194
LEU 1580.0206
GLN 1590.0127
SER 1600.0347
GLY 1610.0314
ASN 1620.0107
SER 1630.0090
GLN 1640.0077
GLU 1650.0078
SER 1660.0117
SER 1660.0117
VAL 1670.0111
VAL 1670.0110
THR 1680.0102
GLU 1690.0078
GLU 1690.0077
GLN 1700.0051
ASP 1710.0029
SER 1720.0094
LYS 1730.0066
ASP 1740.0092
CYS 1750.0064
THR 1760.0075
TYR 1770.0082
SER 1780.0101
LEU 1790.0097
SER 1800.0100
SER 1810.0062
THR 1820.0072
LEU 1830.0060
THR 1840.0059
LEU 1850.0059
SER 1860.0080
LYS 1870.0139
ALA 1880.0134
ASP 1890.0064
TYR 1900.0097
GLU 1910.0082
LYS 1920.0081
HIS 1930.0080
LYS 1940.0062
LYS 1940.0063
VAL 1950.0130
TYR 1960.0126
ALA 1970.0140
CYS 1980.0141
CYS 1980.0140
GLU 1990.0180
VAL 2000.0104
THR 2010.0083
HIS 2020.0083
GLN 2030.0104
GLY 2040.0090
LEU 2050.0178
SER 2060.0435
SER 2070.0378
PRO 2080.0153
VAL 2090.0133
THR 2100.0245
LYS 2110.0195
SER 2120.0152
PHE 2130.0119
ASN 2140.0205
ARG 2150.0118
GLY 2160.0321
GLU 2170.0653
SER 20.0043
VAL 30.0039
GLU 40.0053
GLU 50.0067
SER 60.0070
GLY 70.0076
GLY 80.0075
ARG 90.0062
LEU 100.0073
VAL 110.0024
THR 120.0028
PRO 130.0103
GLY 140.0125
THR 150.0084
PRO 160.0081
LEU 170.0067
THR 180.0072
LEU 190.0075
THR 200.0047
CYS 210.0038
THR 220.0024
VAL 230.0034
SER 240.0058
GLY 250.0064
PHE 260.0033
SER 270.0040
LEU 280.0037
SER 290.0056
SER 290.0056
ASP 300.0041
TYR 310.0043
ALA 320.0041
MET 330.0038
SER 340.0040
TRP 350.0023
VAL 360.0013
ARG 370.0018
GLN 380.0028
ALA 390.0061
PRO 400.0088
GLY 410.0108
LYS 420.0056
GLY 430.0035
LEU 440.0032
GLU 450.0034
TRP 460.0038
ILE 470.0022
GLY 480.0022
ILE 490.0024
ILE 500.0034
TYR 510.0048
ALA 520.0071
SER 530.0191
GLY 540.0148
SER 550.0088
THR 560.0062
THR 560.0062
TYR 570.0054
TYR 580.0057
ALA 590.0120
SER 600.0181
TRP 610.0167
ALA 620.0103
LYS 630.0142
GLY 640.0150
ARG 650.0062
PHE 660.0059
THR 670.0087
ILE 680.0026
SER 690.0026
LYS 700.0043
THR 710.0054
SER 720.0075
THR 730.0061
THR 740.0020
VAL 750.0011
ASP 760.0027
LEU 770.0067
LYS 780.0076
ILE 790.0074
THR 800.0093
SER 810.0114
PRO 820.0122
THR 830.0143
THR 840.0153
GLU 850.0144
ASP 860.0083
THR 870.0077
ALA 880.0081
THR 890.0045
TYR 900.0048
PHE 910.0054
CYS 920.0065
CYS 920.0065
ALA 930.0052
ARG 940.0052
TYR 950.0099
TYR 960.0114
TYR 960.0114
ALA 970.0097
GLY 980.0084
SER 990.0068
ASP 1000.0050
ILE 1010.0048
ILE 1010.0048
TRP 1020.0055
GLY 1030.0071
PRO 1040.0076
GLY 1050.0070
THR 1060.0067
LEU 1070.0054
LEU 1070.0054
VAL 1080.0043
THR 1090.0051
VAL 1100.0071
SER 1110.0063
SER 1120.0084
ALA 1130.0215
SER 1140.0188
THR 1150.0157
LYS 1160.0107
GLY 1170.0098
PRO 1180.0055
SER 1190.0039
VAL 1200.0048
PHE 1210.0078
PRO 1220.0070
LEU 1230.0054
ALA 1240.0058
PRO 1250.0065
SER 1260.0085
GLY 1330.0103
THR 1340.0053
THR 1340.0052
ALA 1350.0037
ALA 1360.0049
LEU 1370.0044
GLY 1380.0042
CYS 1390.0012
CYS 1390.0012
LEU 1400.0011
VAL 1410.0028
LYS 1420.0076
ASP 1430.0079
TYR 1440.0087
PHE 1450.0116
PRO 1460.0116
GLU 1470.0113
GLU 1470.0113
PRO 1480.0110
VAL 1490.0076
THR 1500.0102
VAL 1510.0038
SER 1520.0045
TRP 1530.0054
ASN 1540.0080
SER 1550.0096
GLY 1560.0118
ALA 1570.0146
LEU 1580.0123
THR 1590.0161
SER 1600.0161
SER 1600.0161
GLY 1610.0112
VAL 1620.0075
HIS 1630.0078
THR 1640.0077
PHE 1650.0089
PRO 1660.0088
ALA 1670.0053
VAL 1680.0041
VAL 1680.0041
LEU 1690.0140
GLN 1700.0212
SER 1710.0346
SER 1720.0339
GLY 1730.0249
LEU 1740.0101
TYR 1750.0050
SER 1760.0056
SER 1760.0057
LEU 1770.0059
SER 1780.0063
SER 1780.0063
SER 1790.0059
VAL 1800.0063
VAL 1810.0048
THR 1820.0027
VAL 1830.0013
PRO 1840.0041
SER 1850.0080
SER 1850.0080
SER 1860.0105
SER 1870.0087
LEU 1880.0085
GLY 1890.0130
THR 1900.0131
GLN 1910.0084
GLN 1910.0084
THR 1920.0052
TYR 1930.0039
ILE 1940.0052
CYS 1950.0037
CYS 1950.0037
ASN 1960.0083
VAL 1970.0061
ASN 1980.0106
ASN 1980.0106
HIS 1990.0063
LYS 2000.0081
PRO 2010.0091
SER 2020.0073
ASN 2030.0054
THR 2040.0059
LYS 2050.0156
VAL 2060.0131
ASP 2070.0134
LYS 2080.0092
LYS 2090.0088
VAL 2100.0072
GLU 2110.0091
PRO 2120.0090
LYS 2130.0101
SER 2140.0455

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.