CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0367
ALA 10.0130
ASP 20.0130
VAL 30.0135
VAL 40.0093
MET 50.0096
THR 60.0088
GLN 70.0069
THR 80.0062
PRO 90.0067
SER 100.0105
SER 100.0105
SER 110.0075
VAL 120.0047
VAL 120.0046
SER 130.0045
SER 130.0045
ALA 140.0059
ALA 150.0067
VAL 160.0130
GLY 170.0140
GLY 180.0132
THR 190.0094
VAL 200.0071
THR 210.0063
THR 210.0064
ILE 220.0042
ASN 230.0039
CYS 240.0048
CYS 240.0049
GLN 250.0099
GLN 250.0099
ALA 260.0101
SER 270.0099
GLN 280.0135
SER 290.0135
ILE 300.0131
SER 310.0115
SER 310.0115
ALA 320.0119
TYR 330.0105
LEU 340.0069
ALA 350.0069
TRP 360.0067
TYR 370.0017
GLN 380.0015
GLN 390.0022
LYS 400.0078
PRO 410.0064
GLY 420.0070
GLN 430.0074
PRO 440.0058
PRO 450.0041
LYS 460.0042
LEU 470.0034
LEU 480.0036
ILE 490.0053
ILE 490.0053
TYR 500.0063
ASP 510.0074
ALA 520.0068
SER 530.0085
ASP 540.0104
LEU 550.0111
ALA 560.0098
SER 570.0153
SER 570.0153
GLY 580.0204
VAL 590.0145
SER 600.0186
SER 610.0154
ARG 620.0154
PHE 630.0116
LYS 640.0069
GLY 650.0065
SER 660.0091
GLY 670.0101
SER 680.0101
GLY 690.0098
THR 700.0091
GLN 710.0099
PHE 720.0097
THR 730.0050
LEU 740.0028
THR 750.0045
ILE 760.0096
SER 770.0137
SER 770.0137
ASP 780.0161
LEU 790.0128
GLU 800.0137
CYS 810.0126
ALA 820.0129
ASP 830.0105
ALA 840.0054
ALA 850.0030
THR 860.0046
TYR 870.0050
TYR 880.0084
CYS 890.0080
CYS 890.0079
GLN 900.0078
THR 910.0115
TYR 920.0106
TYR 930.0112
ALA 940.0185
ILE 950.0135
ILE 960.0148
THR 970.0181
TYR 980.0149
GLY 990.0128
ALA 1000.0085
ALA 1010.0078
PHE 1020.0083
GLY 1030.0083
GLY 1040.0085
GLY 1050.0103
THR 1060.0080
GLU 1070.0057
GLU 1070.0057
VAL 1080.0038
VAL 1090.0028
VAL 1100.0047
LYS 1110.0033
ARG 1120.0153
THR 1130.0190
VAL 1140.0158
ALA 1150.0046
ALA 1160.0031
PRO 1170.0090
SER 1180.0128
SER 1180.0128
VAL 1190.0116
PHE 1200.0132
ILE 1210.0056
PHE 1220.0054
PRO 1230.0070
PRO 1240.0126
SER 1250.0135
ASP 1260.0127
GLU 1270.0130
GLN 1280.0094
LEU 1290.0081
LYS 1300.0153
SER 1310.0070
GLY 1320.0047
THR 1330.0060
ALA 1340.0075
SER 1350.0088
VAL 1360.0041
VAL 1370.0023
CYS 1380.0062
LEU 1390.0132
LEU 1400.0114
ASN 1410.0126
ASN 1420.0111
ASN 1420.0112
PHE 1430.0062
TYR 1440.0063
PRO 1450.0120
ARG 1460.0154
GLU 1470.0187
ALA 1480.0112
LYS 1490.0121
VAL 1500.0122
GLN 1510.0040
TRP 1520.0015
LYS 1530.0041
VAL 1540.0049
ASP 1550.0084
ASN 1560.0121
ALA 1570.0119
LEU 1580.0070
GLN 1590.0045
SER 1600.0199
GLY 1610.0177
ASN 1620.0063
SER 1630.0050
GLN 1640.0084
GLU 1650.0149
SER 1660.0172
SER 1660.0172
VAL 1670.0159
VAL 1670.0159
THR 1680.0145
GLU 1690.0077
GLU 1690.0076
GLN 1700.0064
ASP 1710.0075
SER 1720.0199
LYS 1730.0227
ASP 1740.0184
CYS 1750.0058
THR 1760.0082
TYR 1770.0126
SER 1780.0138
LEU 1790.0143
SER 1800.0152
SER 1810.0081
THR 1820.0039
LEU 1830.0018
THR 1840.0047
LEU 1850.0048
SER 1860.0040
LYS 1870.0055
ALA 1880.0041
ASP 1890.0031
TYR 1900.0057
GLU 1910.0055
LYS 1920.0027
HIS 1930.0031
LYS 1940.0050
LYS 1940.0050
VAL 1950.0048
TYR 1960.0035
ALA 1970.0009
CYS 1980.0025
CYS 1980.0025
GLU 1990.0077
VAL 2000.0078
THR 2010.0073
HIS 2020.0150
GLN 2030.0160
GLY 2040.0099
LEU 2050.0208
SER 2060.0367
SER 2070.0360
PRO 2080.0117
VAL 2090.0109
THR 2100.0111
LYS 2110.0061
SER 2120.0015
PHE 2130.0040
ASN 2140.0086
ARG 2150.0096
GLY 2160.0126
GLU 2170.0264
SER 20.0068
VAL 30.0075
GLU 40.0086
GLU 50.0105
SER 60.0103
GLY 70.0095
GLY 80.0111
ARG 90.0109
LEU 100.0092
VAL 110.0131
THR 120.0224
PRO 130.0252
GLY 140.0295
THR 150.0181
PRO 160.0130
LEU 170.0044
THR 180.0077
LEU 190.0093
THR 200.0087
CYS 210.0081
THR 220.0064
VAL 230.0088
SER 240.0112
GLY 250.0126
PHE 260.0097
SER 270.0107
LEU 280.0112
SER 290.0134
SER 290.0134
ASP 300.0112
TYR 310.0107
ALA 320.0059
MET 330.0058
SER 340.0061
TRP 350.0050
VAL 360.0039
ARG 370.0035
GLN 380.0065
ALA 390.0073
PRO 400.0088
GLY 410.0117
LYS 420.0127
GLY 430.0148
LEU 440.0063
GLU 450.0044
TRP 460.0043
ILE 470.0020
GLY 480.0025
ILE 490.0043
ILE 500.0071
TYR 510.0081
ALA 520.0083
SER 530.0119
GLY 540.0070
SER 550.0082
THR 560.0045
THR 560.0045
TYR 570.0061
TYR 580.0036
ALA 590.0056
SER 600.0069
TRP 610.0064
ALA 620.0059
LYS 630.0077
GLY 640.0132
ARG 650.0094
PHE 660.0082
THR 670.0107
ILE 680.0067
SER 690.0062
LYS 700.0051
THR 710.0185
SER 720.0192
THR 730.0132
THR 740.0044
VAL 750.0051
ASP 760.0065
LEU 770.0116
LYS 780.0119
ILE 790.0089
THR 800.0201
SER 810.0208
PRO 820.0188
THR 830.0243
THR 840.0170
GLU 850.0159
ASP 860.0084
THR 870.0036
ALA 880.0061
THR 890.0061
TYR 900.0061
PHE 910.0075
CYS 920.0078
CYS 920.0078
ALA 930.0074
ARG 940.0067
TYR 950.0082
TYR 960.0081
TYR 960.0080
ALA 970.0060
GLY 980.0035
SER 990.0042
ASP 1000.0056
ILE 1010.0058
ILE 1010.0058
TRP 1020.0059
GLY 1030.0068
PRO 1040.0097
GLY 1050.0093
THR 1060.0091
LEU 1070.0090
LEU 1070.0090
VAL 1080.0058
THR 1090.0053
VAL 1100.0087
SER 1110.0111
SER 1120.0158
ALA 1130.0079
SER 1140.0110
THR 1150.0169
LYS 1160.0195
GLY 1170.0187
PRO 1180.0167
SER 1190.0075
VAL 1200.0085
PHE 1210.0099
PRO 1220.0075
LEU 1230.0084
ALA 1240.0098
PRO 1250.0168
SER 1260.0147
GLY 1330.0224
THR 1340.0222
THR 1340.0223
ALA 1350.0192
ALA 1360.0095
LEU 1370.0090
GLY 1380.0113
CYS 1390.0043
CYS 1390.0043
LEU 1400.0049
VAL 1410.0043
LYS 1420.0102
ASP 1430.0100
TYR 1440.0088
PHE 1450.0081
PRO 1460.0101
GLU 1470.0093
GLU 1470.0093
PRO 1480.0067
VAL 1490.0066
THR 1500.0123
VAL 1510.0089
SER 1520.0078
TRP 1530.0070
ASN 1540.0141
SER 1550.0192
GLY 1560.0238
ALA 1570.0228
LEU 1580.0128
THR 1590.0173
SER 1600.0144
SER 1600.0145
GLY 1610.0136
VAL 1620.0123
HIS 1630.0079
THR 1640.0084
PHE 1650.0094
PRO 1660.0083
ALA 1670.0066
VAL 1680.0094
VAL 1680.0094
LEU 1690.0134
GLN 1700.0177
SER 1710.0248
SER 1720.0180
GLY 1730.0104
LEU 1740.0047
TYR 1750.0023
SER 1760.0064
SER 1760.0064
LEU 1770.0071
SER 1780.0035
SER 1780.0035
SER 1790.0034
VAL 1800.0032
VAL 1810.0145
THR 1820.0143
VAL 1830.0130
PRO 1840.0173
SER 1850.0186
SER 1850.0186
SER 1860.0122
SER 1870.0057
LEU 1880.0105
GLY 1890.0062
THR 1900.0093
GLN 1910.0120
GLN 1910.0120
THR 1920.0145
TYR 1930.0102
ILE 1940.0091
CYS 1950.0084
CYS 1950.0084
ASN 1960.0133
VAL 1970.0139
ASN 1980.0168
ASN 1980.0168
HIS 1990.0137
LYS 2000.0145
PRO 2010.0224
SER 2020.0331
ASN 2030.0331
THR 2040.0329
LYS 2050.0292
VAL 2060.0208
ASP 2070.0186
LYS 2080.0083
LYS 2090.0106
VAL 2100.0119
GLU 2110.0203
PRO 2120.0237
LYS 2130.0231
SER 2140.0363

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.