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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0581
ALA 10.0200
ASP 20.0178
VAL 30.0149
VAL 40.0125
MET 50.0119
THR 60.0130
GLN 70.0089
THR 80.0116
PRO 90.0166
SER 100.0245
SER 100.0246
SER 110.0202
VAL 120.0150
VAL 120.0147
SER 130.0166
SER 130.0163
ALA 140.0197
ALA 150.0210
VAL 160.0201
GLY 170.0276
GLY 180.0221
THR 190.0129
VAL 200.0097
THR 210.0089
THR 210.0090
ILE 220.0055
ASN 230.0056
CYS 240.0077
CYS 240.0079
GLN 250.0095
GLN 250.0096
ALA 260.0081
SER 270.0094
GLN 280.0099
SER 290.0094
ILE 300.0063
SER 310.0132
SER 310.0132
ALA 320.0139
TYR 330.0083
LEU 340.0066
ALA 350.0066
TRP 360.0073
TYR 370.0034
GLN 380.0039
GLN 390.0073
LYS 400.0146
PRO 410.0335
GLY 420.0462
GLN 430.0287
PRO 440.0172
PRO 450.0097
LYS 460.0142
LEU 470.0127
LEU 480.0079
ILE 490.0113
ILE 490.0113
TYR 500.0128
ASP 510.0127
ALA 520.0123
SER 530.0109
ASP 540.0120
LEU 550.0211
ALA 560.0381
SER 570.0581
SER 570.0581
GLY 580.0414
VAL 590.0277
SER 600.0276
SER 610.0126
ARG 620.0129
PHE 630.0084
LYS 640.0060
GLY 650.0083
SER 660.0083
GLY 670.0145
SER 680.0116
GLY 690.0095
THR 700.0050
GLN 710.0080
PHE 720.0110
THR 730.0067
LEU 740.0065
THR 750.0057
ILE 760.0059
SER 770.0091
SER 770.0092
ASP 780.0126
LEU 790.0168
GLU 800.0185
CYS 810.0161
ALA 820.0173
ASP 830.0132
ALA 840.0122
ALA 850.0110
THR 860.0101
TYR 870.0093
TYR 880.0049
CYS 890.0069
CYS 890.0069
GLN 900.0074
THR 910.0084
TYR 920.0070
TYR 930.0065
ALA 940.0088
ILE 950.0121
ILE 960.0147
THR 970.0194
TYR 980.0162
GLY 990.0193
ALA 1000.0121
ALA 1010.0097
PHE 1020.0081
GLY 1030.0082
GLY 1040.0072
GLY 1050.0083
THR 1060.0129
GLU 1070.0145
GLU 1070.0145
VAL 1080.0094
VAL 1090.0106
VAL 1100.0083
LYS 1110.0142
ARG 1120.0153
THR 1130.0204
VAL 1140.0173
ALA 1150.0150
ALA 1160.0131
PRO 1170.0132
SER 1180.0079
SER 1180.0079
VAL 1190.0065
PHE 1200.0072
ILE 1210.0021
PHE 1220.0022
PRO 1230.0029
PRO 1240.0018
SER 1250.0020
ASP 1260.0022
GLU 1270.0025
GLN 1280.0029
LEU 1290.0027
LYS 1300.0053
SER 1310.0049
GLY 1320.0044
THR 1330.0037
ALA 1340.0026
SER 1350.0029
VAL 1360.0022
VAL 1370.0015
CYS 1380.0018
LEU 1390.0088
LEU 1400.0084
ASN 1410.0092
ASN 1420.0132
ASN 1420.0131
PHE 1430.0115
TYR 1440.0095
PRO 1450.0094
ARG 1460.0087
GLU 1470.0069
ALA 1480.0071
LYS 1490.0076
VAL 1500.0069
GLN 1510.0039
TRP 1520.0025
LYS 1530.0035
VAL 1540.0027
ASP 1550.0041
ASN 1560.0143
ALA 1570.0149
LEU 1580.0128
GLN 1590.0132
SER 1600.0229
GLY 1610.0188
ASN 1620.0119
SER 1630.0075
GLN 1640.0050
GLU 1650.0078
SER 1660.0100
SER 1660.0100
VAL 1670.0094
VAL 1670.0094
THR 1680.0097
GLU 1690.0057
GLU 1690.0056
GLN 1700.0039
ASP 1710.0028
SER 1720.0121
LYS 1730.0098
ASP 1740.0095
CYS 1750.0067
THR 1760.0078
TYR 1770.0069
SER 1780.0091
LEU 1790.0090
SER 1800.0098
SER 1810.0029
THR 1820.0012
LEU 1830.0028
THR 1840.0048
LEU 1850.0037
SER 1860.0027
LYS 1870.0054
ALA 1880.0080
ASP 1890.0088
TYR 1900.0061
GLU 1910.0056
LYS 1920.0089
HIS 1930.0059
LYS 1940.0062
LYS 1940.0062
VAL 1950.0057
TYR 1960.0038
ALA 1970.0042
CYS 1980.0049
CYS 1980.0049
GLU 1990.0090
VAL 2000.0056
THR 2010.0044
HIS 2020.0085
GLN 2030.0117
GLY 2040.0131
LEU 2050.0255
SER 2060.0509
SER 2070.0418
PRO 2080.0150
VAL 2090.0109
THR 2100.0098
LYS 2110.0045
SER 2120.0050
PHE 2130.0048
ASN 2140.0075
ARG 2150.0039
GLY 2160.0042
GLU 2170.0108
SER 20.0055
VAL 30.0042
GLU 40.0045
GLU 50.0043
SER 60.0045
GLY 70.0044
GLY 80.0067
ARG 90.0083
LEU 100.0086
VAL 110.0087
THR 120.0104
PRO 130.0111
GLY 140.0118
THR 150.0079
PRO 160.0038
LEU 170.0038
THR 180.0038
LEU 190.0045
THR 200.0034
CYS 210.0041
THR 220.0076
VAL 230.0085
SER 240.0105
GLY 250.0101
PHE 260.0082
SER 270.0100
LEU 280.0082
SER 290.0137
SER 290.0138
ASP 300.0099
TYR 310.0042
ALA 320.0029
MET 330.0028
SER 340.0036
TRP 350.0045
VAL 360.0043
ARG 370.0043
GLN 380.0074
ALA 390.0093
PRO 400.0136
GLY 410.0321
LYS 420.0301
GLY 430.0364
LEU 440.0081
GLU 450.0051
TRP 460.0063
ILE 470.0056
GLY 480.0054
ILE 490.0065
ILE 500.0058
TYR 510.0081
ALA 520.0125
SER 530.0321
GLY 540.0212
SER 550.0147
THR 560.0079
THR 560.0079
TYR 570.0089
TYR 580.0103
ALA 590.0120
SER 600.0147
TRP 610.0122
ALA 620.0109
LYS 630.0147
GLY 640.0154
ARG 650.0103
PHE 660.0056
THR 670.0039
ILE 680.0046
SER 690.0035
LYS 700.0024
THR 710.0104
SER 720.0172
THR 730.0153
THR 740.0066
VAL 750.0019
ASP 760.0020
LEU 770.0040
LYS 780.0041
ILE 790.0046
THR 800.0047
SER 810.0037
PRO 820.0069
THR 830.0125
THR 840.0138
GLU 850.0167
ASP 860.0084
THR 870.0085
ALA 880.0087
THR 890.0062
TYR 900.0052
PHE 910.0052
CYS 920.0022
CYS 920.0022
ALA 930.0016
ARG 940.0021
TYR 950.0049
TYR 960.0081
TYR 960.0082
ALA 970.0048
GLY 980.0022
SER 990.0021
ASP 1000.0043
ILE 1010.0042
ILE 1010.0042
TRP 1020.0043
GLY 1030.0050
PRO 1040.0042
GLY 1050.0044
THR 1060.0051
LEU 1070.0057
LEU 1070.0057
VAL 1080.0052
THR 1090.0055
VAL 1100.0033
SER 1110.0061
SER 1120.0123
ALA 1130.0196
SER 1140.0188
THR 1150.0142
LYS 1160.0103
GLY 1170.0118
PRO 1180.0117
SER 1190.0066
VAL 1200.0064
PHE 1210.0051
PRO 1220.0022
LEU 1230.0020
ALA 1240.0021
PRO 1250.0037
SER 1260.0046
GLY 1330.0058
THR 1340.0072
THR 1340.0072
ALA 1350.0069
ALA 1360.0050
LEU 1370.0040
GLY 1380.0032
CYS 1390.0047
CYS 1390.0047
LEU 1400.0054
VAL 1410.0073
LYS 1420.0092
ASP 1430.0085
TYR 1440.0097
PHE 1450.0113
PRO 1460.0102
GLU 1470.0103
GLU 1470.0103
PRO 1480.0111
VAL 1490.0095
THR 1500.0105
VAL 1510.0061
SER 1520.0045
TRP 1530.0024
ASN 1540.0071
SER 1550.0108
GLY 1560.0120
ALA 1570.0145
LEU 1580.0074
THR 1590.0029
SER 1600.0083
SER 1600.0083
GLY 1610.0098
VAL 1620.0072
HIS 1630.0079
THR 1640.0092
PHE 1650.0090
PRO 1660.0126
ALA 1670.0104
VAL 1680.0096
VAL 1680.0096
LEU 1690.0102
GLN 1700.0067
SER 1710.0160
SER 1720.0163
GLY 1730.0121
LEU 1740.0043
TYR 1750.0063
SER 1760.0069
SER 1760.0069
LEU 1770.0080
SER 1780.0059
SER 1780.0059
SER 1790.0055
VAL 1800.0045
VAL 1810.0063
THR 1820.0070
VAL 1830.0066
PRO 1840.0098
SER 1850.0056
SER 1850.0056
SER 1860.0117
SER 1870.0055
LEU 1880.0025
GLY 1890.0045
THR 1900.0042
GLN 1910.0030
GLN 1910.0030
THR 1920.0056
TYR 1930.0031
ILE 1940.0025
CYS 1950.0008
CYS 1950.0009
ASN 1960.0043
VAL 1970.0051
ASN 1980.0064
ASN 1980.0064
HIS 1990.0067
LYS 2000.0065
PRO 2010.0053
SER 2020.0093
ASN 2030.0114
THR 2040.0080
LYS 2050.0074
VAL 2060.0061
ASP 2070.0051
LYS 2080.0027
LYS 2090.0035
VAL 2100.0030
GLU 2110.0024
PRO 2120.0031
LYS 2130.0036
SER 2140.0043

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.