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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0621
ALA 10.0197
ASP 20.0127
VAL 30.0115
VAL 40.0102
MET 50.0087
THR 60.0081
GLN 70.0112
THR 80.0119
PRO 90.0121
SER 100.0218
SER 100.0217
SER 110.0208
VAL 120.0176
VAL 120.0177
SER 130.0214
SER 130.0213
ALA 140.0169
ALA 150.0172
VAL 160.0131
GLY 170.0157
GLY 180.0107
THR 190.0057
VAL 200.0076
THR 210.0129
THR 210.0128
ILE 220.0126
ASN 230.0102
CYS 240.0084
CYS 240.0083
GLN 250.0109
GLN 250.0107
ALA 260.0134
SER 270.0175
GLN 280.0161
SER 290.0171
ILE 300.0156
SER 310.0184
SER 310.0184
ALA 320.0161
TYR 330.0151
LEU 340.0058
ALA 350.0050
TRP 360.0048
TYR 370.0031
GLN 380.0045
GLN 390.0032
LYS 400.0053
PRO 410.0061
GLY 420.0128
GLN 430.0127
PRO 440.0089
PRO 450.0095
LYS 460.0105
LEU 470.0088
LEU 480.0076
ILE 490.0075
ILE 490.0075
TYR 500.0093
ASP 510.0115
ALA 520.0070
SER 530.0029
ASP 540.0044
LEU 550.0073
ALA 560.0095
SER 570.0091
SER 570.0091
GLY 580.0121
VAL 590.0131
SER 600.0137
SER 610.0164
ARG 620.0137
PHE 630.0141
LYS 640.0114
GLY 650.0104
SER 660.0121
GLY 670.0063
SER 680.0114
GLY 690.0168
THR 700.0138
GLN 710.0108
PHE 720.0085
THR 730.0130
LEU 740.0115
THR 750.0123
ILE 760.0119
SER 770.0103
SER 770.0103
ASP 780.0111
LEU 790.0032
GLU 800.0029
CYS 810.0052
ALA 820.0077
ASP 830.0092
ALA 840.0115
ALA 850.0102
THR 860.0112
TYR 870.0114
TYR 880.0021
CYS 890.0025
CYS 890.0025
GLN 900.0046
THR 910.0116
TYR 920.0111
TYR 930.0106
ALA 940.0093
ILE 950.0088
ILE 960.0126
THR 970.0103
TYR 980.0069
GLY 990.0052
ALA 1000.0073
ALA 1010.0068
PHE 1020.0068
GLY 1030.0089
GLY 1040.0077
GLY 1050.0079
THR 1060.0181
GLU 1070.0191
GLU 1070.0191
VAL 1080.0160
VAL 1090.0219
VAL 1100.0147
LYS 1110.0216
ARG 1120.0211
THR 1130.0185
VAL 1140.0101
ALA 1150.0074
ALA 1160.0080
PRO 1170.0076
SER 1180.0038
SER 1180.0039
VAL 1190.0039
PHE 1200.0043
ILE 1210.0019
PHE 1220.0018
PRO 1230.0017
PRO 1240.0026
SER 1250.0032
ASP 1260.0030
GLU 1270.0048
GLN 1280.0038
LEU 1290.0031
LYS 1300.0050
SER 1310.0044
GLY 1320.0028
THR 1330.0022
ALA 1340.0021
SER 1350.0019
VAL 1360.0017
VAL 1370.0016
CYS 1380.0016
LEU 1390.0050
LEU 1400.0050
ASN 1410.0050
ASN 1420.0073
ASN 1420.0072
PHE 1430.0069
TYR 1440.0063
PRO 1450.0065
ARG 1460.0062
GLU 1470.0067
ALA 1480.0072
LYS 1490.0070
VAL 1500.0063
GLN 1510.0029
TRP 1520.0011
LYS 1530.0012
VAL 1540.0012
ASP 1550.0020
ASN 1560.0060
ALA 1570.0065
LEU 1580.0063
GLN 1590.0060
SER 1600.0091
GLY 1610.0100
ASN 1620.0083
SER 1630.0082
GLN 1640.0066
GLU 1650.0057
SER 1660.0051
SER 1660.0050
VAL 1670.0040
VAL 1670.0040
THR 1680.0030
GLU 1690.0049
GLU 1690.0049
GLN 1700.0062
ASP 1710.0051
SER 1720.0087
LYS 1730.0080
ASP 1740.0090
CYS 1750.0082
THR 1760.0062
TYR 1770.0033
SER 1780.0050
LEU 1790.0052
SER 1800.0056
SER 1810.0029
THR 1820.0026
LEU 1830.0023
THR 1840.0027
LEU 1850.0019
SER 1860.0019
LYS 1870.0033
ALA 1880.0026
ASP 1890.0025
TYR 1900.0029
GLU 1910.0026
LYS 1920.0030
HIS 1930.0029
LYS 1940.0029
LYS 1940.0029
VAL 1950.0026
TYR 1960.0020
ALA 1970.0029
CYS 1980.0038
CYS 1980.0038
GLU 1990.0087
VAL 2000.0051
THR 2010.0039
HIS 2020.0084
GLN 2030.0133
GLY 2040.0115
LEU 2050.0197
SER 2060.0373
SER 2070.0315
PRO 2080.0154
VAL 2090.0104
THR 2100.0089
LYS 2110.0037
SER 2120.0028
PHE 2130.0011
ASN 2140.0031
ARG 2150.0021
GLY 2160.0042
GLU 2170.0092
SER 20.0176
VAL 30.0131
GLU 40.0154
GLU 50.0050
SER 60.0049
GLY 70.0025
GLY 80.0149
ARG 90.0137
LEU 100.0125
VAL 110.0212
THR 120.0229
PRO 130.0172
GLY 140.0135
THR 150.0176
PRO 160.0195
LEU 170.0114
THR 180.0101
LEU 190.0088
THR 200.0052
CYS 210.0075
THR 220.0141
VAL 230.0151
SER 240.0216
GLY 250.0188
PHE 260.0112
SER 270.0154
LEU 280.0102
SER 290.0216
SER 290.0217
ASP 300.0240
TYR 310.0178
ALA 320.0095
MET 330.0091
SER 340.0096
TRP 350.0050
VAL 360.0049
ARG 370.0071
GLN 380.0055
ALA 390.0094
PRO 400.0127
GLY 410.0107
LYS 420.0140
GLY 430.0259
LEU 440.0079
GLU 450.0068
TRP 460.0045
ILE 470.0059
GLY 480.0044
ILE 490.0078
ILE 500.0137
TYR 510.0164
ALA 520.0191
SER 530.0621
GLY 540.0456
SER 550.0356
THR 560.0180
THR 560.0181
TYR 570.0153
TYR 580.0094
ALA 590.0206
SER 600.0341
TRP 610.0306
ALA 620.0209
LYS 630.0226
GLY 640.0158
ARG 650.0099
PHE 660.0050
THR 670.0060
ILE 680.0102
SER 690.0119
LYS 700.0112
THR 710.0147
SER 720.0283
THR 730.0235
THR 740.0109
VAL 750.0055
ASP 760.0080
LEU 770.0091
LYS 780.0097
ILE 790.0110
THR 800.0132
SER 810.0132
PRO 820.0134
THR 830.0092
THR 840.0089
GLU 850.0098
ASP 860.0106
THR 870.0074
ALA 880.0081
THR 890.0063
TYR 900.0061
PHE 910.0053
CYS 920.0115
CYS 920.0114
ALA 930.0131
ARG 940.0129
TYR 950.0196
TYR 960.0247
TYR 960.0246
ALA 970.0269
GLY 980.0191
SER 990.0187
ASP 1000.0202
ILE 1010.0152
ILE 1010.0152
TRP 1020.0139
GLY 1030.0139
PRO 1040.0123
GLY 1050.0087
THR 1060.0042
LEU 1070.0097
LEU 1070.0097
VAL 1080.0096
THR 1090.0073
VAL 1100.0094
SER 1110.0195
SER 1120.0377
ALA 1130.0183
SER 1140.0184
THR 1150.0113
LYS 1160.0056
GLY 1170.0043
PRO 1180.0047
SER 1190.0034
VAL 1200.0033
PHE 1210.0032
PRO 1220.0024
LEU 1230.0020
ALA 1240.0024
PRO 1250.0032
SER 1260.0033
GLY 1330.0067
THR 1340.0055
THR 1340.0055
ALA 1350.0051
ALA 1360.0026
LEU 1370.0022
GLY 1380.0021
CYS 1390.0013
CYS 1390.0013
LEU 1400.0014
VAL 1410.0020
LYS 1420.0032
ASP 1430.0024
TYR 1440.0029
PHE 1450.0019
PRO 1460.0034
GLU 1470.0057
GLU 1470.0057
PRO 1480.0043
VAL 1490.0033
THR 1500.0050
VAL 1510.0013
SER 1520.0022
TRP 1530.0025
ASN 1540.0052
SER 1550.0100
GLY 1560.0091
ALA 1570.0077
LEU 1580.0073
THR 1590.0167
SER 1600.0182
SER 1600.0182
GLY 1610.0085
VAL 1620.0078
HIS 1630.0039
THR 1640.0033
PHE 1650.0034
PRO 1660.0037
ALA 1670.0053
VAL 1680.0078
VAL 1680.0078
LEU 1690.0097
GLN 1700.0113
SER 1710.0157
SER 1720.0077
GLY 1730.0090
LEU 1740.0040
TYR 1750.0045
SER 1760.0038
SER 1760.0037
LEU 1770.0036
SER 1780.0017
SER 1780.0017
SER 1790.0017
VAL 1800.0025
VAL 1810.0016
THR 1820.0019
VAL 1830.0023
PRO 1840.0041
SER 1850.0054
SER 1850.0054
SER 1860.0050
SER 1870.0052
LEU 1880.0047
GLY 1890.0050
THR 1900.0059
GLN 1910.0054
GLN 1910.0055
THR 1920.0040
TYR 1930.0035
ILE 1940.0037
CYS 1950.0035
CYS 1950.0035
ASN 1960.0021
VAL 1970.0030
ASN 1980.0051
ASN 1980.0050
HIS 1990.0017
LYS 2000.0012
PRO 2010.0044
SER 2020.0050
ASN 2030.0047
THR 2040.0063
LYS 2050.0089
VAL 2060.0052
ASP 2070.0042
LYS 2080.0039
LYS 2090.0042
VAL 2100.0036
GLU 2110.0052
PRO 2120.0045
LYS 2130.0036
SER 2140.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.