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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0434
ALA 10.0393
ASP 20.0321
VAL 30.0231
VAL 40.0107
MET 50.0102
THR 60.0107
GLN 70.0062
THR 80.0170
PRO 90.0235
SER 100.0261
SER 100.0262
SER 110.0191
VAL 120.0149
VAL 120.0146
SER 130.0014
SER 130.0014
ALA 140.0073
ALA 150.0143
VAL 160.0144
GLY 170.0162
GLY 180.0148
THR 190.0050
VAL 200.0076
THR 210.0159
THR 210.0160
ILE 220.0138
ASN 230.0113
CYS 240.0046
CYS 240.0049
GLN 250.0097
GLN 250.0097
ALA 260.0136
SER 270.0171
GLN 280.0182
SER 290.0182
ILE 300.0185
SER 310.0158
SER 310.0158
ALA 320.0145
TYR 330.0158
LEU 340.0119
ALA 350.0109
TRP 360.0087
TYR 370.0049
GLN 380.0038
GLN 390.0031
LYS 400.0033
PRO 410.0068
GLY 420.0102
GLN 430.0092
PRO 440.0070
PRO 450.0075
LYS 460.0114
LEU 470.0105
LEU 480.0060
ILE 490.0103
ILE 490.0103
TYR 500.0138
ASP 510.0176
ALA 520.0166
SER 530.0177
ASP 540.0186
LEU 550.0076
ALA 560.0258
SER 570.0420
SER 570.0420
GLY 580.0362
VAL 590.0232
SER 600.0244
SER 610.0144
ARG 620.0120
PHE 630.0064
LYS 640.0101
GLY 650.0131
SER 660.0194
GLY 670.0134
SER 680.0140
GLY 690.0175
THR 700.0139
GLN 710.0083
PHE 720.0096
THR 730.0134
LEU 740.0107
THR 750.0120
ILE 760.0045
SER 770.0075
SER 770.0076
ASP 780.0137
LEU 790.0100
GLU 800.0095
CYS 810.0078
ALA 820.0071
ASP 830.0055
ALA 840.0043
ALA 850.0040
THR 860.0031
TYR 870.0024
TYR 880.0043
CYS 890.0057
CYS 890.0057
GLN 900.0067
THR 910.0132
TYR 920.0155
TYR 930.0142
ALA 940.0109
ILE 950.0135
ILE 960.0145
THR 970.0256
TYR 980.0244
GLY 990.0243
ALA 1000.0095
ALA 1010.0074
PHE 1020.0062
GLY 1030.0047
GLY 1040.0017
GLY 1050.0046
THR 1060.0117
GLU 1070.0099
GLU 1070.0099
VAL 1080.0044
VAL 1090.0042
VAL 1100.0078
LYS 1110.0136
ARG 1120.0139
THR 1130.0152
VAL 1140.0147
ALA 1150.0118
ALA 1160.0106
PRO 1170.0107
SER 1180.0075
SER 1180.0075
VAL 1190.0065
PHE 1200.0071
ILE 1210.0051
PHE 1220.0063
PRO 1230.0066
PRO 1240.0042
SER 1250.0035
ASP 1260.0047
GLU 1270.0018
GLN 1280.0013
LEU 1290.0034
LYS 1300.0024
SER 1310.0063
GLY 1320.0089
THR 1330.0065
ALA 1340.0050
SER 1350.0033
VAL 1360.0048
VAL 1370.0043
CYS 1380.0034
LEU 1390.0058
LEU 1400.0060
ASN 1410.0067
ASN 1420.0102
ASN 1420.0102
PHE 1430.0102
TYR 1440.0103
PRO 1450.0114
ARG 1460.0103
GLU 1470.0111
ALA 1480.0060
LYS 1490.0067
VAL 1500.0066
GLN 1510.0061
TRP 1520.0039
LYS 1530.0037
VAL 1540.0054
ASP 1550.0092
ASN 1560.0148
ALA 1570.0110
LEU 1580.0098
GLN 1590.0057
SER 1600.0126
GLY 1610.0140
ASN 1620.0089
SER 1630.0065
GLN 1640.0056
GLU 1650.0040
SER 1660.0061
SER 1660.0061
VAL 1670.0055
VAL 1670.0055
THR 1680.0059
GLU 1690.0064
GLU 1690.0064
GLN 1700.0062
ASP 1710.0065
SER 1720.0146
LYS 1730.0142
ASP 1740.0125
CYS 1750.0099
THR 1760.0095
TYR 1770.0087
SER 1780.0059
LEU 1790.0048
SER 1800.0051
SER 1810.0031
THR 1820.0037
LEU 1830.0040
THR 1840.0045
LEU 1850.0046
SER 1860.0048
LYS 1870.0052
ALA 1880.0043
ASP 1890.0023
TYR 1900.0017
GLU 1910.0020
LYS 1920.0016
HIS 1930.0047
LYS 1940.0050
LYS 1940.0050
VAL 1950.0046
TYR 1960.0022
ALA 1970.0025
CYS 1980.0021
CYS 1980.0022
GLU 1990.0088
VAL 2000.0071
THR 2010.0068
HIS 2020.0113
GLN 2030.0119
GLY 2040.0087
LEU 2050.0148
SER 2060.0346
SER 2070.0282
PRO 2080.0137
VAL 2090.0108
THR 2100.0080
LYS 2110.0033
SER 2120.0022
PHE 2130.0024
ASN 2140.0043
ARG 2150.0048
GLY 2160.0061
GLU 2170.0207
SER 20.0081
VAL 30.0077
GLU 40.0100
GLU 50.0097
SER 60.0089
GLY 70.0078
GLY 80.0097
ARG 90.0099
LEU 100.0103
VAL 110.0110
THR 120.0133
PRO 130.0153
GLY 140.0100
THR 150.0063
PRO 160.0046
LEU 170.0044
THR 180.0053
LEU 190.0070
THR 200.0082
CYS 210.0079
THR 220.0066
VAL 230.0082
SER 240.0109
GLY 250.0113
PHE 260.0068
SER 270.0055
LEU 280.0019
SER 290.0032
SER 290.0033
ASP 300.0049
TYR 310.0036
ALA 320.0038
MET 330.0044
SER 340.0058
TRP 350.0065
VAL 360.0050
ARG 370.0029
GLN 380.0045
ALA 390.0083
PRO 400.0126
GLY 410.0113
LYS 420.0039
GLY 430.0055
LEU 440.0031
GLU 450.0021
TRP 460.0035
ILE 470.0067
GLY 480.0064
ILE 490.0057
ILE 500.0054
TYR 510.0033
ALA 520.0028
SER 530.0036
GLY 540.0053
SER 550.0046
THR 560.0079
THR 560.0079
TYR 570.0103
TYR 580.0142
ALA 590.0182
SER 600.0240
TRP 610.0230
ALA 620.0215
LYS 630.0236
GLY 640.0240
ARG 650.0179
PHE 660.0115
THR 670.0105
ILE 680.0088
SER 690.0076
LYS 700.0062
THR 710.0034
SER 720.0033
THR 730.0055
THR 740.0044
VAL 750.0060
ASP 760.0073
LEU 770.0060
LYS 780.0036
ILE 790.0027
THR 800.0090
SER 810.0042
PRO 820.0093
THR 830.0165
THR 840.0166
GLU 850.0184
ASP 860.0084
THR 870.0086
ALA 880.0082
THR 890.0050
TYR 900.0054
PHE 910.0079
CYS 920.0097
CYS 920.0096
ALA 930.0065
ARG 940.0036
TYR 950.0087
TYR 960.0137
TYR 960.0138
ALA 970.0117
GLY 980.0072
SER 990.0046
ASP 1000.0038
ILE 1010.0046
ILE 1010.0046
TRP 1020.0069
GLY 1030.0086
PRO 1040.0098
GLY 1050.0085
THR 1060.0076
LEU 1070.0058
LEU 1070.0058
VAL 1080.0067
THR 1090.0056
VAL 1100.0076
SER 1110.0099
SER 1120.0191
ALA 1130.0322
SER 1140.0341
THR 1150.0188
LYS 1160.0102
GLY 1170.0096
PRO 1180.0134
SER 1190.0033
VAL 1200.0026
PHE 1210.0027
PRO 1220.0079
LEU 1230.0095
ALA 1240.0132
PRO 1250.0160
SER 1260.0143
GLY 1330.0111
THR 1340.0094
THR 1340.0094
ALA 1350.0072
ALA 1360.0071
LEU 1370.0078
GLY 1380.0081
CYS 1390.0030
CYS 1390.0030
LEU 1400.0038
VAL 1410.0049
LYS 1420.0106
ASP 1430.0101
TYR 1440.0096
PHE 1450.0100
PRO 1460.0059
GLU 1470.0051
GLU 1470.0052
PRO 1480.0086
VAL 1490.0095
THR 1500.0110
VAL 1510.0032
SER 1520.0010
TRP 1530.0039
ASN 1540.0090
SER 1550.0066
GLY 1560.0103
ALA 1570.0177
LEU 1580.0144
THR 1590.0162
SER 1600.0089
SER 1600.0089
GLY 1610.0057
VAL 1620.0062
HIS 1630.0018
THR 1640.0044
PHE 1650.0050
PRO 1660.0106
ALA 1670.0103
VAL 1680.0111
VAL 1680.0111
LEU 1690.0065
GLN 1700.0162
SER 1710.0227
SER 1720.0331
GLY 1730.0227
LEU 1740.0131
TYR 1750.0074
SER 1760.0095
SER 1760.0095
LEU 1770.0109
SER 1780.0045
SER 1780.0045
SER 1790.0025
VAL 1800.0019
VAL 1810.0070
THR 1820.0066
VAL 1830.0062
PRO 1840.0086
SER 1850.0036
SER 1850.0036
SER 1860.0125
SER 1870.0137
LEU 1880.0099
GLY 1890.0128
THR 1900.0141
GLN 1910.0175
GLN 1910.0176
THR 1920.0200
TYR 1930.0119
ILE 1940.0113
CYS 1950.0081
CYS 1950.0081
ASN 1960.0019
VAL 1970.0042
ASN 1980.0085
ASN 1980.0085
HIS 1990.0082
LYS 2000.0059
PRO 2010.0045
SER 2020.0070
ASN 2030.0080
THR 2040.0100
LYS 2050.0102
VAL 2060.0028
ASP 2070.0058
LYS 2080.0087
LYS 2090.0151
VAL 2100.0161
GLU 2110.0220
PRO 2120.0246
LYS 2130.0227
SER 2140.0434

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.