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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0806
ALA 10.0477
ASP 20.0237
VAL 30.0121
VAL 40.0049
MET 50.0061
THR 60.0101
GLN 70.0089
THR 80.0069
PRO 90.0048
SER 100.0109
SER 100.0109
SER 110.0123
VAL 120.0100
VAL 120.0100
SER 130.0180
SER 130.0179
ALA 140.0158
ALA 150.0154
VAL 160.0103
GLY 170.0157
GLY 180.0149
THR 190.0063
VAL 200.0014
THR 210.0032
THR 210.0030
ILE 220.0064
ASN 230.0068
CYS 240.0075
CYS 240.0074
GLN 250.0069
GLN 250.0068
ALA 260.0013
SER 270.0044
GLN 280.0123
SER 290.0095
ILE 300.0078
SER 310.0051
SER 310.0051
ALA 320.0058
TYR 330.0114
LEU 340.0061
ALA 350.0067
TRP 360.0075
TYR 370.0033
GLN 380.0042
GLN 390.0030
LYS 400.0097
PRO 410.0289
GLY 420.0456
GLN 430.0263
PRO 440.0124
PRO 450.0087
LYS 460.0017
LEU 470.0019
LEU 480.0024
ILE 490.0020
ILE 490.0019
TYR 500.0038
ASP 510.0032
ALA 520.0043
SER 530.0049
ASP 540.0058
LEU 550.0056
ALA 560.0052
SER 570.0109
SER 570.0109
GLY 580.0084
VAL 590.0074
SER 600.0126
SER 610.0105
ARG 620.0096
PHE 630.0079
LYS 640.0076
GLY 650.0072
SER 660.0070
GLY 670.0041
SER 680.0023
GLY 690.0035
THR 700.0043
GLN 710.0060
PHE 720.0072
THR 730.0077
LEU 740.0078
THR 750.0072
ILE 760.0058
SER 770.0067
SER 770.0068
ASP 780.0087
LEU 790.0029
GLU 800.0041
CYS 810.0067
ALA 820.0104
ASP 830.0099
ALA 840.0114
ALA 850.0081
THR 860.0082
TYR 870.0087
TYR 880.0074
CYS 890.0064
CYS 890.0064
GLN 900.0083
THR 910.0146
TYR 920.0165
TYR 930.0138
ALA 940.0332
ILE 950.0179
ILE 960.0315
THR 970.0382
TYR 980.0174
GLY 990.0135
ALA 1000.0163
ALA 1010.0157
PHE 1020.0133
GLY 1030.0062
GLY 1040.0062
GLY 1050.0038
THR 1060.0089
GLU 1070.0118
GLU 1070.0117
VAL 1080.0104
VAL 1090.0187
VAL 1100.0110
LYS 1110.0165
ARG 1120.0102
THR 1130.0078
VAL 1140.0043
ALA 1150.0030
ALA 1160.0017
PRO 1170.0014
SER 1180.0027
SER 1180.0027
VAL 1190.0029
PHE 1200.0032
ILE 1210.0026
PHE 1220.0023
PRO 1230.0026
PRO 1240.0068
SER 1250.0074
ASP 1260.0074
GLU 1270.0086
GLN 1280.0069
LEU 1290.0064
LYS 1300.0098
SER 1310.0089
GLY 1320.0045
THR 1330.0058
ALA 1340.0052
SER 1350.0049
VAL 1360.0024
VAL 1370.0015
CYS 1380.0021
LEU 1390.0023
LEU 1400.0020
ASN 1410.0020
ASN 1420.0015
ASN 1420.0016
PHE 1430.0016
TYR 1440.0033
PRO 1450.0019
ARG 1460.0005
GLU 1470.0016
ALA 1480.0017
LYS 1490.0026
VAL 1500.0032
GLN 1510.0009
TRP 1520.0006
LYS 1530.0017
VAL 1540.0015
ASP 1550.0027
ASN 1560.0047
ALA 1570.0034
LEU 1580.0031
GLN 1590.0027
SER 1600.0100
GLY 1610.0093
ASN 1620.0028
SER 1630.0045
GLN 1640.0039
GLU 1650.0043
SER 1660.0042
SER 1660.0042
VAL 1670.0034
VAL 1670.0034
THR 1680.0030
GLU 1690.0037
GLU 1690.0037
GLN 1700.0051
ASP 1710.0061
SER 1720.0128
LYS 1730.0096
ASP 1740.0022
CYS 1750.0058
THR 1760.0034
TYR 1770.0022
SER 1780.0020
LEU 1790.0023
SER 1800.0025
SER 1810.0018
THR 1820.0015
LEU 1830.0019
THR 1840.0037
LEU 1850.0035
SER 1860.0045
LYS 1870.0036
ALA 1880.0026
ASP 1890.0040
TYR 1900.0029
GLU 1910.0017
LYS 1920.0045
HIS 1930.0021
LYS 1940.0026
LYS 1940.0026
VAL 1950.0031
TYR 1960.0016
ALA 1970.0016
CYS 1980.0019
CYS 1980.0019
GLU 1990.0026
VAL 2000.0020
THR 2010.0015
HIS 2020.0017
GLN 2030.0040
GLY 2040.0040
LEU 2050.0028
SER 2060.0051
SER 2070.0049
PRO 2080.0036
VAL 2090.0032
THR 2100.0032
LYS 2110.0025
SER 2120.0022
PHE 2130.0017
ASN 2140.0029
ARG 2150.0008
GLY 2160.0033
GLU 2170.0081
SER 20.0165
VAL 30.0094
GLU 40.0080
GLU 50.0032
SER 60.0065
GLY 70.0106
GLY 80.0131
ARG 90.0126
LEU 100.0096
VAL 110.0137
THR 120.0135
PRO 130.0143
GLY 140.0213
THR 150.0197
PRO 160.0179
LEU 170.0107
THR 180.0099
LEU 190.0095
THR 200.0027
CYS 210.0022
THR 220.0041
VAL 230.0061
SER 240.0123
GLY 250.0173
PHE 260.0097
SER 270.0114
LEU 280.0143
SER 290.0229
SER 290.0229
ASP 300.0188
TYR 310.0163
ALA 320.0089
MET 330.0085
SER 340.0099
TRP 350.0053
VAL 360.0074
ARG 370.0088
GLN 380.0096
ALA 390.0103
PRO 400.0128
GLY 410.0310
LYS 420.0202
GLY 430.0141
LEU 440.0105
GLU 450.0122
TRP 460.0124
ILE 470.0123
GLY 480.0106
ILE 490.0103
ILE 500.0044
TYR 510.0160
ALA 520.0171
SER 530.0806
GLY 540.0555
SER 550.0363
THR 560.0121
THR 560.0121
TYR 570.0096
TYR 580.0083
ALA 590.0165
SER 600.0192
TRP 610.0202
ALA 620.0144
LYS 630.0139
GLY 640.0137
ARG 650.0089
PHE 660.0076
THR 670.0076
ILE 680.0066
SER 690.0098
LYS 700.0114
THR 710.0154
SER 720.0216
THR 730.0167
THR 740.0064
VAL 750.0056
ASP 760.0077
LEU 770.0070
LYS 780.0077
ILE 790.0055
THR 800.0075
SER 810.0118
PRO 820.0120
THR 830.0145
THR 840.0171
GLU 850.0219
ASP 860.0096
THR 870.0105
ALA 880.0101
THR 890.0049
TYR 900.0045
PHE 910.0029
CYS 920.0046
CYS 920.0044
ALA 930.0065
ARG 940.0134
TYR 950.0115
TYR 960.0260
TYR 960.0261
ALA 970.0153
GLY 980.0123
SER 990.0074
ASP 1000.0106
ILE 1010.0140
ILE 1010.0139
TRP 1020.0074
GLY 1030.0072
PRO 1040.0020
GLY 1050.0022
THR 1060.0073
LEU 1070.0095
LEU 1070.0095
VAL 1080.0099
THR 1090.0094
VAL 1100.0106
SER 1110.0116
SER 1120.0135
ALA 1130.0110
SER 1140.0091
THR 1150.0090
LYS 1160.0092
GLY 1170.0094
PRO 1180.0080
SER 1190.0033
VAL 1200.0032
PHE 1210.0009
PRO 1220.0023
LEU 1230.0019
ALA 1240.0033
PRO 1250.0038
SER 1260.0037
GLY 1330.0044
THR 1340.0047
THR 1340.0047
ALA 1350.0040
ALA 1360.0026
LEU 1370.0023
GLY 1380.0021
CYS 1390.0028
CYS 1390.0027
LEU 1400.0025
VAL 1410.0048
LYS 1420.0062
ASP 1430.0062
TYR 1440.0077
PHE 1450.0069
PRO 1460.0066
GLU 1470.0065
GLU 1470.0065
PRO 1480.0075
VAL 1490.0068
THR 1500.0063
VAL 1510.0050
SER 1520.0037
TRP 1530.0022
ASN 1540.0043
SER 1550.0068
GLY 1560.0091
ALA 1570.0108
LEU 1580.0045
THR 1590.0065
SER 1600.0059
SER 1600.0059
GLY 1610.0055
VAL 1620.0047
HIS 1630.0026
THR 1640.0037
PHE 1650.0036
PRO 1660.0068
ALA 1670.0062
VAL 1680.0055
VAL 1680.0055
LEU 1690.0098
GLN 1700.0135
SER 1710.0226
SER 1720.0196
GLY 1730.0155
LEU 1740.0061
TYR 1750.0052
SER 1760.0052
SER 1760.0052
LEU 1770.0057
SER 1780.0030
SER 1780.0030
SER 1790.0033
VAL 1800.0025
VAL 1810.0042
THR 1820.0038
VAL 1830.0038
PRO 1840.0078
SER 1850.0057
SER 1850.0057
SER 1860.0081
SER 1870.0061
LEU 1880.0041
GLY 1890.0045
THR 1900.0045
GLN 1910.0044
GLN 1910.0044
THR 1920.0043
TYR 1930.0029
ILE 1940.0030
CYS 1950.0021
CYS 1950.0022
ASN 1960.0029
VAL 1970.0038
ASN 1980.0031
ASN 1980.0031
HIS 1990.0049
LYS 2000.0045
PRO 2010.0041
SER 2020.0075
ASN 2030.0092
THR 2040.0079
LYS 2050.0052
VAL 2060.0058
ASP 2070.0050
LYS 2080.0032
LYS 2090.0031
VAL 2100.0027
GLU 2110.0053
PRO 2120.0067
LYS 2130.0082
SER 2140.0072

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.