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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 60  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0499
ALA 10.0218
ASP 20.0171
VAL 30.0201
VAL 40.0167
MET 50.0106
THR 60.0068
GLN 70.0046
THR 80.0075
PRO 90.0103
SER 100.0153
SER 100.0153
SER 110.0114
VAL 120.0069
VAL 120.0070
SER 130.0087
SER 130.0087
ALA 140.0095
ALA 150.0117
VAL 160.0145
GLY 170.0130
GLY 180.0113
THR 190.0049
VAL 200.0047
THR 210.0062
THR 210.0061
ILE 220.0042
ASN 230.0027
CYS 240.0014
CYS 240.0014
GLN 250.0032
GLN 250.0033
ALA 260.0093
SER 270.0143
GLN 280.0147
SER 290.0130
ILE 300.0132
SER 310.0118
SER 310.0118
ALA 320.0120
TYR 330.0129
LEU 340.0072
ALA 350.0081
TRP 360.0078
TYR 370.0042
GLN 380.0046
GLN 390.0048
LYS 400.0025
PRO 410.0038
GLY 420.0033
GLN 430.0049
PRO 440.0054
PRO 450.0062
LYS 460.0079
LEU 470.0063
LEU 480.0041
ILE 490.0042
ILE 490.0042
TYR 500.0040
ASP 510.0034
ALA 520.0057
SER 530.0038
ASP 540.0030
LEU 550.0065
ALA 560.0097
SER 570.0194
SER 570.0194
GLY 580.0231
VAL 590.0143
SER 600.0173
SER 610.0108
ARG 620.0095
PHE 630.0074
LYS 640.0049
GLY 650.0035
SER 660.0034
GLY 670.0049
SER 680.0054
GLY 690.0084
THR 700.0060
GLN 710.0020
PHE 720.0044
THR 730.0034
LEU 740.0037
THR 750.0044
ILE 760.0066
SER 770.0080
SER 770.0080
ASP 780.0102
LEU 790.0132
GLU 800.0133
CYS 810.0114
ALA 820.0095
ASP 830.0084
ALA 840.0060
ALA 850.0052
THR 860.0056
TYR 870.0057
TYR 880.0056
CYS 890.0056
CYS 890.0056
GLN 900.0062
THR 910.0126
TYR 920.0125
TYR 930.0127
ALA 940.0100
ILE 950.0082
ILE 960.0067
THR 970.0122
TYR 980.0150
GLY 990.0135
ALA 1000.0093
ALA 1010.0075
PHE 1020.0064
GLY 1030.0028
GLY 1040.0024
GLY 1050.0073
THR 1060.0116
GLU 1070.0103
GLU 1070.0103
VAL 1080.0081
VAL 1090.0115
VAL 1100.0119
LYS 1110.0115
ARG 1120.0214
THR 1130.0217
VAL 1140.0134
ALA 1150.0021
ALA 1160.0043
PRO 1170.0077
SER 1180.0038
SER 1180.0038
VAL 1190.0043
PHE 1200.0031
ILE 1210.0025
PHE 1220.0035
PRO 1230.0041
PRO 1240.0062
SER 1250.0081
ASP 1260.0075
GLU 1270.0142
GLN 1280.0122
LEU 1290.0100
LYS 1300.0214
SER 1310.0156
GLY 1320.0114
THR 1330.0065
ALA 1340.0072
SER 1350.0082
VAL 1360.0057
VAL 1370.0035
CYS 1380.0025
LEU 1390.0021
LEU 1400.0032
ASN 1410.0027
ASN 1420.0060
ASN 1420.0060
PHE 1430.0048
TYR 1440.0070
PRO 1450.0074
ARG 1460.0090
GLU 1470.0137
ALA 1480.0119
LYS 1490.0141
VAL 1500.0101
GLN 1510.0028
TRP 1520.0029
LYS 1530.0052
VAL 1540.0045
ASP 1550.0044
ASN 1560.0078
ALA 1570.0086
LEU 1580.0081
GLN 1590.0064
SER 1600.0271
GLY 1610.0212
ASN 1620.0052
SER 1630.0125
GLN 1640.0091
GLU 1650.0072
SER 1660.0080
SER 1660.0081
VAL 1670.0100
VAL 1670.0101
THR 1680.0116
GLU 1690.0151
GLU 1690.0151
GLN 1700.0107
ASP 1710.0105
SER 1720.0144
LYS 1730.0128
ASP 1740.0088
CYS 1750.0070
THR 1760.0072
TYR 1770.0097
SER 1780.0070
LEU 1790.0055
SER 1800.0037
SER 1810.0051
THR 1820.0060
LEU 1830.0077
THR 1840.0067
LEU 1850.0047
SER 1860.0050
LYS 1870.0082
ALA 1880.0069
ASP 1890.0021
TYR 1900.0044
GLU 1910.0042
LYS 1920.0028
HIS 1930.0046
LYS 1940.0049
LYS 1940.0049
VAL 1950.0039
TYR 1960.0023
ALA 1970.0022
CYS 1980.0033
CYS 1980.0034
GLU 1990.0129
VAL 2000.0137
THR 2010.0158
HIS 2020.0158
GLN 2030.0110
GLY 2040.0043
LEU 2050.0146
SER 2060.0286
SER 2070.0217
PRO 2080.0186
VAL 2090.0164
THR 2100.0174
LYS 2110.0085
SER 2120.0057
PHE 2130.0057
ASN 2140.0070
ARG 2150.0039
GLY 2160.0064
GLU 2170.0202
SER 20.0150
VAL 30.0116
GLU 40.0108
GLU 50.0034
SER 60.0037
GLY 70.0072
GLY 80.0101
ARG 90.0107
LEU 100.0111
VAL 110.0074
THR 120.0143
PRO 130.0220
GLY 140.0171
THR 150.0102
PRO 160.0101
LEU 170.0098
THR 180.0085
LEU 190.0076
THR 200.0031
CYS 210.0060
THR 220.0112
VAL 230.0138
SER 240.0189
GLY 250.0207
PHE 260.0111
SER 270.0114
LEU 280.0116
SER 290.0167
SER 290.0168
ASP 300.0129
TYR 310.0109
ALA 320.0072
MET 330.0062
SER 340.0067
TRP 350.0049
VAL 360.0041
ARG 370.0047
GLN 380.0032
ALA 390.0040
PRO 400.0041
GLY 410.0135
LYS 420.0149
GLY 430.0166
LEU 440.0021
GLU 450.0028
TRP 460.0027
ILE 470.0062
GLY 480.0073
ILE 490.0090
ILE 500.0123
TYR 510.0168
ALA 520.0232
SER 530.0499
GLY 540.0364
SER 550.0225
THR 560.0149
THR 560.0150
TYR 570.0102
TYR 580.0084
ALA 590.0056
SER 600.0048
TRP 610.0049
ALA 620.0103
LYS 630.0129
GLY 640.0175
ARG 650.0114
PHE 660.0115
THR 670.0114
ILE 680.0101
SER 690.0084
LYS 700.0079
THR 710.0090
SER 720.0110
THR 730.0140
THR 740.0088
VAL 750.0057
ASP 760.0054
LEU 770.0095
LYS 780.0090
ILE 790.0086
THR 800.0109
SER 810.0112
PRO 820.0161
THR 830.0210
THR 840.0239
GLU 850.0230
ASP 860.0130
THR 870.0122
ALA 880.0120
THR 890.0037
TYR 900.0024
PHE 910.0026
CYS 920.0063
CYS 920.0064
ALA 930.0052
ARG 940.0052
TYR 950.0031
TYR 960.0160
TYR 960.0159
ALA 970.0137
GLY 980.0066
SER 990.0073
ASP 1000.0133
ILE 1010.0099
ILE 1010.0099
TRP 1020.0093
GLY 1030.0098
PRO 1040.0088
GLY 1050.0035
THR 1060.0024
LEU 1070.0095
LEU 1070.0095
VAL 1080.0100
THR 1090.0106
VAL 1100.0164
SER 1110.0180
SER 1120.0202
ALA 1130.0172
SER 1140.0249
THR 1150.0241
LYS 1160.0212
GLY 1170.0153
PRO 1180.0113
SER 1190.0025
VAL 1200.0017
PHE 1210.0046
PRO 1220.0037
LEU 1230.0057
ALA 1240.0082
PRO 1250.0117
SER 1260.0113
GLY 1330.0120
THR 1340.0122
THR 1340.0123
ALA 1350.0107
ALA 1360.0103
LEU 1370.0105
GLY 1380.0092
CYS 1390.0021
CYS 1390.0022
LEU 1400.0023
VAL 1410.0022
LYS 1420.0067
ASP 1430.0076
TYR 1440.0088
PHE 1450.0103
PRO 1460.0123
GLU 1470.0112
GLU 1470.0111
PRO 1480.0116
VAL 1490.0027
THR 1500.0102
VAL 1510.0040
SER 1520.0044
TRP 1530.0065
ASN 1540.0097
SER 1550.0049
GLY 1560.0059
ALA 1570.0111
LEU 1580.0101
THR 1590.0082
SER 1600.0101
SER 1600.0101
GLY 1610.0095
VAL 1620.0084
HIS 1630.0037
THR 1640.0036
PHE 1650.0033
PRO 1660.0101
ALA 1670.0072
VAL 1680.0090
VAL 1680.0089
LEU 1690.0073
GLN 1700.0094
SER 1710.0139
SER 1720.0239
GLY 1730.0172
LEU 1740.0109
TYR 1750.0030
SER 1760.0015
SER 1760.0015
LEU 1770.0033
SER 1780.0033
SER 1780.0033
SER 1790.0037
VAL 1800.0043
VAL 1810.0125
THR 1820.0124
VAL 1830.0127
PRO 1840.0209
SER 1850.0105
SER 1850.0105
SER 1860.0170
SER 1870.0162
LEU 1880.0055
GLY 1890.0089
THR 1900.0185
GLN 1910.0140
GLN 1910.0141
THR 1920.0173
TYR 1930.0127
ILE 1940.0103
CYS 1950.0085
CYS 1950.0085
ASN 1960.0067
VAL 1970.0062
ASN 1980.0142
ASN 1980.0141
HIS 1990.0023
LYS 2000.0062
PRO 2010.0213
SER 2020.0261
ASN 2030.0180
THR 2040.0199
LYS 2050.0308
VAL 2060.0174
ASP 2070.0079
LYS 2080.0062
LYS 2090.0108
VAL 2100.0136
GLU 2110.0123
PRO 2120.0111
LYS 2130.0121
SER 2140.0210

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.