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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0531
ALA 10.0100
ASP 20.0056
VAL 30.0045
VAL 40.0064
MET 50.0046
THR 60.0063
GLN 70.0022
THR 80.0081
PRO 90.0119
SER 100.0183
SER 100.0183
SER 110.0147
VAL 120.0091
VAL 120.0090
SER 130.0038
SER 130.0037
ALA 140.0024
ALA 150.0041
VAL 160.0034
GLY 170.0049
GLY 180.0054
THR 190.0034
VAL 200.0046
THR 210.0052
THR 210.0053
ILE 220.0033
ASN 230.0045
CYS 240.0038
CYS 240.0038
GLN 250.0045
GLN 250.0043
ALA 260.0031
SER 270.0060
GLN 280.0072
SER 290.0084
ILE 300.0059
SER 310.0076
SER 310.0075
ALA 320.0048
TYR 330.0054
LEU 340.0039
ALA 350.0041
TRP 360.0043
TYR 370.0017
GLN 380.0021
GLN 390.0017
LYS 400.0023
PRO 410.0099
GLY 420.0146
GLN 430.0080
PRO 440.0036
PRO 450.0018
LYS 460.0030
LEU 470.0036
LEU 480.0021
ILE 490.0059
ILE 490.0059
TYR 500.0067
ASP 510.0075
ALA 520.0056
SER 530.0073
ASP 540.0080
LEU 550.0040
ALA 560.0064
SER 570.0084
SER 570.0084
GLY 580.0072
VAL 590.0031
SER 600.0055
SER 610.0046
ARG 620.0061
PHE 630.0058
LYS 640.0067
GLY 650.0072
SER 660.0091
GLY 670.0022
SER 680.0056
GLY 690.0084
THR 700.0056
GLN 710.0048
PHE 720.0024
THR 730.0061
LEU 740.0052
THR 750.0057
ILE 760.0055
SER 770.0058
SER 770.0058
ASP 780.0059
LEU 790.0054
GLU 800.0039
CYS 810.0012
ALA 820.0042
ASP 830.0056
ALA 840.0048
ALA 850.0079
THR 860.0072
TYR 870.0058
TYR 880.0017
CYS 890.0022
CYS 890.0022
GLN 900.0035
THR 910.0048
TYR 920.0053
TYR 930.0056
ALA 940.0037
ILE 950.0046
ILE 960.0080
THR 970.0112
TYR 980.0083
GLY 990.0054
ALA 1000.0038
ALA 1010.0033
PHE 1020.0032
GLY 1030.0028
GLY 1040.0017
GLY 1050.0049
THR 1060.0095
GLU 1070.0109
GLU 1070.0109
VAL 1080.0077
VAL 1090.0034
VAL 1100.0034
LYS 1110.0053
ARG 1120.0078
THR 1130.0065
VAL 1140.0070
ALA 1150.0056
ALA 1160.0060
PRO 1170.0055
SER 1180.0073
SER 1180.0073
VAL 1190.0081
PHE 1200.0106
ILE 1210.0087
PHE 1220.0075
PRO 1230.0066
PRO 1240.0127
SER 1250.0148
ASP 1260.0166
GLU 1270.0178
GLN 1280.0152
LEU 1290.0135
LYS 1300.0267
SER 1310.0299
GLY 1320.0161
THR 1330.0152
ALA 1340.0120
SER 1350.0090
VAL 1360.0070
VAL 1370.0079
CYS 1380.0091
LEU 1390.0086
LEU 1400.0067
ASN 1410.0067
ASN 1420.0091
ASN 1420.0091
PHE 1430.0067
TYR 1440.0064
PRO 1450.0095
ARG 1460.0112
GLU 1470.0119
ALA 1480.0117
LYS 1490.0136
VAL 1500.0044
GLN 1510.0036
TRP 1520.0063
LYS 1530.0100
VAL 1540.0070
ASP 1550.0063
ASN 1560.0080
ALA 1570.0160
LEU 1580.0140
GLN 1590.0126
SER 1600.0145
GLY 1610.0136
ASN 1620.0124
SER 1630.0113
GLN 1640.0101
GLU 1650.0087
SER 1660.0073
SER 1660.0073
VAL 1670.0080
VAL 1670.0080
THR 1680.0084
GLU 1690.0114
GLU 1690.0114
GLN 1700.0097
ASP 1710.0097
SER 1720.0094
LYS 1730.0099
ASP 1740.0120
CYS 1750.0106
THR 1760.0104
TYR 1770.0119
SER 1780.0090
LEU 1790.0082
SER 1800.0082
SER 1810.0084
THR 1820.0082
LEU 1830.0079
THR 1840.0083
LEU 1850.0099
SER 1860.0139
LYS 1870.0109
ALA 1880.0095
ASP 1890.0167
TYR 1900.0116
GLU 1910.0086
LYS 1920.0179
HIS 1930.0085
LYS 1940.0083
LYS 1940.0083
VAL 1950.0092
TYR 1960.0036
ALA 1970.0037
CYS 1980.0046
CYS 1980.0045
GLU 1990.0070
VAL 2000.0055
THR 2010.0108
HIS 2020.0105
GLN 2030.0121
GLY 2040.0107
LEU 2050.0087
SER 2060.0297
SER 2070.0248
PRO 2080.0085
VAL 2090.0079
THR 2100.0116
LYS 2110.0086
SER 2120.0075
PHE 2130.0075
ASN 2140.0151
ARG 2150.0118
GLY 2160.0163
GLU 2170.0503
SER 20.0071
VAL 30.0064
GLU 40.0054
GLU 50.0028
SER 60.0016
GLY 70.0015
GLY 80.0051
ARG 90.0041
LEU 100.0043
VAL 110.0058
THR 120.0095
PRO 130.0089
GLY 140.0075
THR 150.0088
PRO 160.0082
LEU 170.0018
THR 180.0031
LEU 190.0029
THR 200.0044
CYS 210.0044
THR 220.0057
VAL 230.0075
SER 240.0072
GLY 250.0063
PHE 260.0048
SER 270.0034
LEU 280.0029
SER 290.0078
SER 290.0078
ASP 300.0043
TYR 310.0028
ALA 320.0012
MET 330.0019
SER 340.0026
TRP 350.0027
VAL 360.0024
ARG 370.0028
GLN 380.0047
ALA 390.0093
PRO 400.0118
GLY 410.0147
LYS 420.0068
GLY 430.0034
LEU 440.0016
GLU 450.0008
TRP 460.0008
ILE 470.0011
GLY 480.0014
ILE 490.0016
ILE 500.0045
TYR 510.0051
ALA 520.0060
SER 530.0135
GLY 540.0126
SER 550.0120
THR 560.0073
THR 560.0074
TYR 570.0073
TYR 580.0073
ALA 590.0067
SER 600.0090
TRP 610.0047
ALA 620.0032
LYS 630.0060
GLY 640.0065
ARG 650.0056
PHE 660.0041
THR 670.0033
ILE 680.0030
SER 690.0036
LYS 700.0039
THR 710.0115
SER 720.0126
THR 730.0113
THR 740.0060
VAL 750.0041
ASP 760.0051
LEU 770.0044
LYS 780.0043
ILE 790.0037
THR 800.0053
SER 810.0051
PRO 820.0047
THR 830.0067
THR 840.0104
GLU 850.0142
ASP 860.0075
THR 870.0074
ALA 880.0079
THR 890.0036
TYR 900.0030
PHE 910.0025
CYS 920.0038
CYS 920.0038
ALA 930.0047
ARG 940.0056
TYR 950.0036
TYR 960.0065
TYR 960.0066
ALA 970.0073
GLY 980.0059
SER 990.0050
ASP 1000.0046
ILE 1010.0058
ILE 1010.0058
TRP 1020.0046
GLY 1030.0042
PRO 1040.0024
GLY 1050.0007
THR 1060.0021
LEU 1070.0048
LEU 1070.0048
VAL 1080.0036
THR 1090.0036
VAL 1100.0046
SER 1110.0094
SER 1120.0141
ALA 1130.0239
SER 1140.0287
THR 1150.0218
LYS 1160.0094
GLY 1170.0127
PRO 1180.0146
SER 1190.0108
VAL 1200.0131
PHE 1210.0080
PRO 1220.0063
LEU 1230.0036
ALA 1240.0090
PRO 1250.0125
SER 1260.0186
GLY 1330.0288
THR 1340.0175
THR 1340.0175
ALA 1350.0113
ALA 1360.0048
LEU 1370.0041
GLY 1380.0068
CYS 1390.0102
CYS 1390.0100
LEU 1400.0091
VAL 1410.0125
LYS 1420.0064
ASP 1430.0047
TYR 1440.0082
PHE 1450.0075
PRO 1460.0068
GLU 1470.0078
GLU 1470.0078
PRO 1480.0086
VAL 1490.0102
THR 1500.0097
VAL 1510.0137
SER 1520.0098
TRP 1530.0078
ASN 1540.0081
SER 1550.0088
GLY 1560.0140
ALA 1570.0310
LEU 1580.0177
THR 1590.0323
SER 1600.0232
SER 1600.0233
GLY 1610.0210
VAL 1620.0184
HIS 1630.0040
THR 1640.0051
PHE 1650.0070
PRO 1660.0109
ALA 1670.0116
VAL 1680.0110
VAL 1680.0110
LEU 1690.0139
GLN 1700.0156
SER 1710.0270
SER 1720.0241
GLY 1730.0147
LEU 1740.0058
TYR 1750.0062
SER 1760.0077
SER 1760.0076
LEU 1770.0107
SER 1780.0077
SER 1780.0077
SER 1790.0076
VAL 1800.0046
VAL 1810.0065
THR 1820.0059
VAL 1830.0047
PRO 1840.0123
SER 1850.0147
SER 1850.0147
SER 1860.0131
SER 1870.0120
LEU 1880.0097
GLY 1890.0090
THR 1900.0141
GLN 1910.0137
GLN 1910.0137
THR 1920.0132
TYR 1930.0114
ILE 1940.0140
CYS 1950.0154
CYS 1950.0154
ASN 1960.0126
VAL 1970.0133
ASN 1980.0061
ASN 1980.0060
HIS 1990.0067
LYS 2000.0152
PRO 2010.0114
SER 2020.0217
ASN 2030.0405
THR 2040.0304
LYS 2050.0149
VAL 2060.0199
ASP 2070.0196
LYS 2080.0190
LYS 2090.0163
VAL 2100.0076
GLU 2110.0225
PRO 2120.0338
LYS 2130.0440
SER 2140.0531

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.