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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 62  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0472
ALA 10.0088
ASP 20.0086
VAL 30.0092
VAL 40.0097
MET 50.0075
THR 60.0072
GLN 70.0038
THR 80.0049
PRO 90.0057
SER 100.0054
SER 100.0054
SER 110.0036
VAL 120.0026
VAL 120.0027
SER 130.0055
SER 130.0056
ALA 140.0056
ALA 150.0066
VAL 160.0090
GLY 170.0073
GLY 180.0063
THR 190.0030
VAL 200.0038
THR 210.0042
THR 210.0042
ILE 220.0028
ASN 230.0030
CYS 240.0022
CYS 240.0021
GLN 250.0051
GLN 250.0051
ALA 260.0059
SER 270.0085
GLN 280.0089
SER 290.0068
ILE 300.0061
SER 310.0060
SER 310.0060
ALA 320.0039
TYR 330.0048
LEU 340.0035
ALA 350.0036
TRP 360.0032
TYR 370.0052
GLN 380.0052
GLN 390.0053
LYS 400.0090
PRO 410.0108
GLY 420.0106
GLN 430.0044
PRO 440.0032
PRO 450.0049
LYS 460.0060
LEU 470.0045
LEU 480.0022
ILE 490.0011
ILE 490.0011
TYR 500.0034
ASP 510.0055
ALA 520.0040
SER 530.0071
ASP 540.0076
LEU 550.0072
ALA 560.0056
SER 570.0069
SER 570.0069
GLY 580.0082
VAL 590.0077
SER 600.0153
SER 610.0125
ARG 620.0103
PHE 630.0073
LYS 640.0077
GLY 650.0066
SER 660.0089
GLY 670.0070
SER 680.0060
GLY 690.0055
THR 700.0018
GLN 710.0022
PHE 720.0029
THR 730.0043
LEU 740.0039
THR 750.0058
ILE 760.0051
SER 770.0064
SER 770.0065
ASP 780.0073
LEU 790.0071
GLU 800.0061
CYS 810.0050
ALA 820.0018
ASP 830.0037
ALA 840.0049
ALA 850.0032
THR 860.0027
TYR 870.0027
TYR 880.0048
CYS 890.0049
CYS 890.0049
GLN 900.0048
THR 910.0064
TYR 920.0062
TYR 930.0062
ALA 940.0115
ILE 950.0084
ILE 960.0141
THR 970.0127
TYR 980.0091
GLY 990.0095
ALA 1000.0059
ALA 1010.0048
PHE 1020.0047
GLY 1030.0036
GLY 1040.0033
GLY 1050.0039
THR 1060.0028
GLU 1070.0029
GLU 1070.0029
VAL 1080.0028
VAL 1090.0074
VAL 1100.0074
LYS 1110.0073
ARG 1120.0111
THR 1130.0134
VAL 1140.0119
ALA 1150.0042
ALA 1160.0032
PRO 1170.0051
SER 1180.0078
SER 1180.0078
VAL 1190.0074
PHE 1200.0083
ILE 1210.0042
PHE 1220.0035
PRO 1230.0029
PRO 1240.0123
SER 1250.0138
ASP 1260.0131
GLU 1270.0204
GLN 1280.0179
LEU 1290.0183
LYS 1300.0246
SER 1310.0174
GLY 1320.0175
THR 1330.0118
ALA 1340.0132
SER 1350.0129
VAL 1360.0070
VAL 1370.0045
CYS 1380.0052
LEU 1390.0056
LEU 1400.0054
ASN 1410.0061
ASN 1420.0062
ASN 1420.0063
PHE 1430.0043
TYR 1440.0035
PRO 1450.0021
ARG 1460.0069
GLU 1470.0088
ALA 1480.0051
LYS 1490.0065
VAL 1500.0090
GLN 1510.0098
TRP 1520.0019
LYS 1530.0052
VAL 1540.0112
ASP 1550.0186
ASN 1560.0354
ALA 1570.0189
LEU 1580.0095
GLN 1590.0097
SER 1600.0432
GLY 1610.0328
ASN 1620.0040
SER 1630.0199
GLN 1640.0156
GLU 1650.0128
SER 1660.0118
SER 1660.0118
VAL 1670.0121
VAL 1670.0121
THR 1680.0112
GLU 1690.0095
GLU 1690.0095
GLN 1700.0076
ASP 1710.0059
SER 1720.0140
LYS 1730.0224
ASP 1740.0204
CYS 1750.0120
THR 1760.0098
TYR 1770.0102
SER 1780.0088
LEU 1790.0089
SER 1800.0084
SER 1810.0091
THR 1820.0099
LEU 1830.0112
THR 1840.0095
LEU 1850.0080
SER 1860.0073
LYS 1870.0118
ALA 1880.0137
ASP 1890.0098
TYR 1900.0082
GLU 1910.0068
LYS 1920.0100
HIS 1930.0067
LYS 1940.0029
LYS 1940.0029
VAL 1950.0061
TYR 1960.0028
ALA 1970.0033
CYS 1980.0064
CYS 1980.0064
GLU 1990.0185
VAL 2000.0129
THR 2010.0121
HIS 2020.0173
GLN 2030.0216
GLY 2040.0143
LEU 2050.0172
SER 2060.0278
SER 2070.0113
PRO 2080.0203
VAL 2090.0207
THR 2100.0258
LYS 2110.0167
SER 2120.0112
PHE 2130.0099
ASN 2140.0072
ARG 2150.0077
GLY 2160.0134
GLU 2170.0355
SER 20.0108
VAL 30.0078
GLU 40.0077
GLU 50.0062
SER 60.0048
GLY 70.0024
GLY 80.0059
ARG 90.0064
LEU 100.0044
VAL 110.0123
THR 120.0137
PRO 130.0096
GLY 140.0188
THR 150.0186
PRO 160.0153
LEU 170.0067
THR 180.0014
LEU 190.0036
THR 200.0068
CYS 210.0073
THR 220.0073
VAL 230.0082
SER 240.0132
GLY 250.0170
PHE 260.0078
SER 270.0047
LEU 280.0022
SER 290.0035
SER 290.0035
ASP 300.0016
TYR 310.0035
ALA 320.0048
MET 330.0044
SER 340.0055
TRP 350.0038
VAL 360.0021
ARG 370.0019
GLN 380.0010
ALA 390.0024
PRO 400.0034
GLY 410.0043
LYS 420.0018
GLY 430.0040
LEU 440.0014
GLU 450.0016
TRP 460.0033
ILE 470.0049
GLY 480.0047
ILE 490.0051
ILE 500.0071
TYR 510.0102
ALA 520.0135
SER 530.0345
GLY 540.0195
SER 550.0074
THR 560.0066
THR 560.0066
TYR 570.0078
TYR 580.0093
ALA 590.0077
SER 600.0117
TRP 610.0105
ALA 620.0092
LYS 630.0114
GLY 640.0138
ARG 650.0063
PHE 660.0045
THR 670.0072
ILE 680.0078
SER 690.0066
LYS 700.0058
THR 710.0050
SER 720.0052
THR 730.0055
THR 740.0054
VAL 750.0064
ASP 760.0070
LEU 770.0057
LYS 780.0025
ILE 790.0019
THR 800.0051
SER 810.0106
PRO 820.0106
THR 830.0065
THR 840.0043
GLU 850.0063
ASP 860.0035
THR 870.0029
ALA 880.0029
THR 890.0018
TYR 900.0019
PHE 910.0026
CYS 920.0061
CYS 920.0061
ALA 930.0052
ARG 940.0045
TYR 950.0017
TYR 960.0025
TYR 960.0025
ALA 970.0033
GLY 980.0030
SER 990.0037
ASP 1000.0051
ILE 1010.0065
ILE 1010.0065
TRP 1020.0058
GLY 1030.0056
PRO 1040.0031
GLY 1050.0028
THR 1060.0029
LEU 1070.0026
LEU 1070.0026
VAL 1080.0029
THR 1090.0025
VAL 1100.0054
SER 1110.0135
SER 1120.0233
ALA 1130.0246
SER 1140.0280
THR 1150.0222
LYS 1160.0108
GLY 1170.0097
PRO 1180.0072
SER 1190.0073
VAL 1200.0043
PHE 1210.0068
PRO 1220.0020
LEU 1230.0033
ALA 1240.0061
PRO 1250.0161
SER 1260.0180
GLY 1330.0311
THR 1340.0168
THR 1340.0169
ALA 1350.0069
ALA 1360.0103
LEU 1370.0096
GLY 1380.0078
CYS 1390.0010
CYS 1390.0010
LEU 1400.0050
VAL 1410.0056
LYS 1420.0106
ASP 1430.0090
TYR 1440.0075
PHE 1450.0041
PRO 1460.0038
GLU 1470.0052
GLU 1470.0052
PRO 1480.0076
VAL 1490.0041
THR 1500.0077
VAL 1510.0081
SER 1520.0075
TRP 1530.0073
ASN 1540.0117
SER 1550.0243
GLY 1560.0383
ALA 1570.0428
LEU 1580.0237
THR 1590.0374
SER 1600.0288
SER 1600.0288
GLY 1610.0262
VAL 1620.0151
HIS 1630.0032
THR 1640.0041
PHE 1650.0072
PRO 1660.0105
ALA 1670.0087
VAL 1680.0105
VAL 1680.0105
LEU 1690.0126
GLN 1700.0271
SER 1710.0460
SER 1720.0472
GLY 1730.0356
LEU 1740.0108
TYR 1750.0076
SER 1760.0093
SER 1760.0093
LEU 1770.0107
SER 1780.0041
SER 1780.0041
SER 1790.0006
VAL 1800.0023
VAL 1810.0156
THR 1820.0130
VAL 1830.0124
PRO 1840.0129
SER 1850.0128
SER 1850.0128
SER 1860.0162
SER 1870.0113
LEU 1880.0101
GLY 1890.0148
THR 1900.0120
GLN 1910.0093
GLN 1910.0093
THR 1920.0043
TYR 1930.0050
ILE 1940.0048
CYS 1950.0074
CYS 1950.0075
ASN 1960.0105
VAL 1970.0070
ASN 1980.0102
ASN 1980.0102
HIS 1990.0070
LYS 2000.0108
PRO 2010.0154
SER 2020.0145
ASN 2030.0075
THR 2040.0037
LYS 2050.0154
VAL 2060.0130
ASP 2070.0151
LYS 2080.0068
LYS 2090.0080
VAL 2100.0090
GLU 2110.0171
PRO 2120.0241
LYS 2130.0244
SER 2140.0276

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.