CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 68  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0673
ALA 10.0090
ASP 20.0077
VAL 30.0050
VAL 40.0053
MET 50.0026
THR 60.0024
GLN 70.0041
THR 80.0060
PRO 90.0069
SER 100.0097
SER 100.0097
SER 110.0079
VAL 120.0043
VAL 120.0043
SER 130.0055
SER 130.0054
ALA 140.0054
ALA 150.0049
VAL 160.0032
GLY 170.0063
GLY 180.0081
THR 190.0040
VAL 200.0040
THR 210.0043
THR 210.0043
ILE 220.0025
ASN 230.0040
CYS 240.0039
CYS 240.0038
GLN 250.0021
GLN 250.0022
ALA 260.0016
SER 270.0055
GLN 280.0079
SER 290.0069
ILE 300.0044
SER 310.0050
SER 310.0050
ALA 320.0046
TYR 330.0039
LEU 340.0019
ALA 350.0017
TRP 360.0018
TYR 370.0025
GLN 380.0025
GLN 390.0029
LYS 400.0043
PRO 410.0103
GLY 420.0128
GLN 430.0062
PRO 440.0051
PRO 450.0039
LYS 460.0028
LEU 470.0021
LEU 480.0014
ILE 490.0030
ILE 490.0030
TYR 500.0028
ASP 510.0026
ALA 520.0039
SER 530.0047
ASP 540.0047
LEU 550.0018
ALA 560.0066
SER 570.0099
SER 570.0099
GLY 580.0074
VAL 590.0033
SER 600.0029
SER 610.0030
ARG 620.0031
PHE 630.0024
LYS 640.0038
GLY 650.0045
SER 660.0065
GLY 670.0044
SER 680.0035
GLY 690.0043
THR 700.0013
GLN 710.0016
PHE 720.0036
THR 730.0054
LEU 740.0037
THR 750.0032
ILE 760.0042
SER 770.0043
SER 770.0043
ASP 780.0046
LEU 790.0043
GLU 800.0014
CYS 810.0017
ALA 820.0018
ASP 830.0030
ALA 840.0030
ALA 850.0047
THR 860.0040
TYR 870.0034
TYR 880.0007
CYS 890.0013
CYS 890.0013
GLN 900.0018
THR 910.0017
TYR 920.0022
TYR 930.0029
ALA 940.0042
ILE 950.0041
ILE 960.0078
THR 970.0048
TYR 980.0039
GLY 990.0074
ALA 1000.0047
ALA 1010.0032
PHE 1020.0020
GLY 1030.0015
GLY 1040.0025
GLY 1050.0030
THR 1060.0053
GLU 1070.0065
GLU 1070.0065
VAL 1080.0055
VAL 1090.0033
VAL 1100.0027
LYS 1110.0025
ARG 1120.0102
THR 1130.0064
VAL 1140.0080
ALA 1150.0057
ALA 1160.0070
PRO 1170.0054
SER 1180.0038
SER 1180.0037
VAL 1190.0066
PHE 1200.0097
ILE 1210.0129
PHE 1220.0123
PRO 1230.0145
PRO 1240.0163
SER 1250.0193
ASP 1260.0261
GLU 1270.0192
GLN 1280.0159
LEU 1290.0191
LYS 1300.0292
SER 1310.0268
GLY 1320.0488
THR 1330.0185
ALA 1340.0115
SER 1350.0114
VAL 1360.0109
VAL 1370.0108
CYS 1380.0112
LEU 1390.0049
LEU 1400.0031
ASN 1410.0056
ASN 1420.0084
ASN 1420.0084
PHE 1430.0062
TYR 1440.0064
PRO 1450.0060
ARG 1460.0057
GLU 1470.0071
ALA 1480.0071
LYS 1490.0086
VAL 1500.0099
GLN 1510.0202
TRP 1520.0130
LYS 1530.0180
VAL 1540.0025
ASP 1550.0119
ASN 1560.0341
ALA 1570.0486
LEU 1580.0400
GLN 1590.0194
SER 1600.0234
GLY 1610.0339
ASN 1620.0243
SER 1630.0104
GLN 1640.0094
GLU 1650.0080
SER 1660.0076
SER 1660.0077
VAL 1670.0064
VAL 1670.0064
THR 1680.0082
GLU 1690.0100
GLU 1690.0101
GLN 1700.0101
ASP 1710.0106
SER 1720.0020
LYS 1730.0144
ASP 1740.0195
CYS 1750.0120
THR 1760.0108
TYR 1770.0103
SER 1780.0066
LEU 1790.0050
SER 1800.0061
SER 1810.0091
THR 1820.0094
LEU 1830.0098
THR 1840.0112
LEU 1850.0082
SER 1860.0121
LYS 1870.0167
ALA 1880.0192
ASP 1890.0161
TYR 1900.0169
GLU 1910.0356
LYS 1920.0576
HIS 1930.0224
LYS 1940.0238
LYS 1940.0239
VAL 1950.0241
TYR 1960.0092
ALA 1970.0084
CYS 1980.0090
CYS 1980.0088
GLU 1990.0049
VAL 2000.0054
THR 2010.0092
HIS 2020.0085
GLN 2030.0156
GLY 2040.0171
LEU 2050.0197
SER 2060.0220
SER 2070.0172
PRO 2080.0122
VAL 2090.0096
THR 2100.0133
LYS 2110.0167
SER 2120.0166
PHE 2130.0176
ASN 2140.0165
ARG 2150.0124
GLY 2160.0379
GLU 2170.0673
SER 20.0091
VAL 30.0072
GLU 40.0059
GLU 50.0022
SER 60.0017
GLY 70.0036
GLY 80.0046
ARG 90.0037
LEU 100.0026
VAL 110.0044
THR 120.0037
PRO 130.0042
GLY 140.0056
THR 150.0051
PRO 160.0056
LEU 170.0048
THR 180.0031
LEU 190.0022
THR 200.0027
CYS 210.0037
THR 220.0036
VAL 230.0080
SER 240.0106
GLY 250.0138
PHE 260.0094
SER 270.0070
LEU 280.0056
SER 290.0036
SER 290.0036
ASP 300.0052
TYR 310.0064
ALA 320.0036
MET 330.0033
SER 340.0031
TRP 350.0010
VAL 360.0016
ARG 370.0016
GLN 380.0024
ALA 390.0020
PRO 400.0030
GLY 410.0028
LYS 420.0024
GLY 430.0016
LEU 440.0014
GLU 450.0015
TRP 460.0034
ILE 470.0038
GLY 480.0028
ILE 490.0030
ILE 500.0046
TYR 510.0058
ALA 520.0075
SER 530.0156
GLY 540.0096
SER 550.0063
THR 560.0056
THR 560.0056
TYR 570.0064
TYR 580.0076
ALA 590.0093
SER 600.0102
TRP 610.0085
ALA 620.0078
LYS 630.0090
GLY 640.0076
ARG 650.0054
PHE 660.0033
THR 670.0023
ILE 680.0031
SER 690.0042
LYS 700.0051
THR 710.0044
SER 720.0049
THR 730.0063
THR 740.0037
VAL 750.0040
ASP 760.0039
LEU 770.0019
LYS 780.0020
ILE 790.0028
THR 800.0043
SER 810.0047
PRO 820.0058
THR 830.0052
THR 840.0052
GLU 850.0050
ASP 860.0034
THR 870.0030
ALA 880.0030
THR 890.0030
TYR 900.0027
PHE 910.0036
CYS 920.0051
CYS 920.0050
ALA 930.0058
ARG 940.0063
TYR 950.0047
TYR 960.0040
TYR 960.0039
ALA 970.0034
GLY 980.0029
SER 990.0039
ASP 1000.0043
ILE 1010.0066
ILE 1010.0066
TRP 1020.0064
GLY 1030.0059
PRO 1040.0050
GLY 1050.0038
THR 1060.0027
LEU 1070.0027
LEU 1070.0027
VAL 1080.0031
THR 1090.0026
VAL 1100.0034
SER 1110.0035
SER 1120.0065
ALA 1130.0022
SER 1140.0033
THR 1150.0039
LYS 1160.0050
GLY 1170.0050
PRO 1180.0046
SER 1190.0072
VAL 1200.0054
PHE 1210.0055
PRO 1220.0060
LEU 1230.0047
ALA 1240.0050
PRO 1250.0052
SER 1260.0044
GLY 1330.0265
THR 1340.0232
THR 1340.0232
ALA 1350.0171
ALA 1360.0061
LEU 1370.0057
GLY 1380.0066
CYS 1390.0034
CYS 1390.0033
LEU 1400.0028
VAL 1410.0037
LYS 1420.0036
ASP 1430.0044
TYR 1440.0035
PHE 1450.0012
PRO 1460.0011
GLU 1470.0011
GLU 1470.0011
PRO 1480.0026
VAL 1490.0019
THR 1500.0020
VAL 1510.0045
SER 1520.0035
TRP 1530.0025
ASN 1540.0053
SER 1550.0148
GLY 1560.0194
ALA 1570.0287
LEU 1580.0151
THR 1590.0187
SER 1600.0118
SER 1600.0118
GLY 1610.0130
VAL 1620.0106
HIS 1630.0069
THR 1640.0057
PHE 1650.0066
PRO 1660.0041
ALA 1670.0042
VAL 1680.0048
VAL 1680.0048
LEU 1690.0037
GLN 1700.0037
SER 1710.0080
SER 1720.0084
GLY 1730.0053
LEU 1740.0029
TYR 1750.0017
SER 1760.0024
SER 1760.0024
LEU 1770.0039
SER 1780.0043
SER 1780.0043
SER 1790.0038
VAL 1800.0036
VAL 1810.0117
THR 1820.0119
VAL 1830.0113
PRO 1840.0126
SER 1850.0273
SER 1850.0273
SER 1860.0333
SER 1870.0121
LEU 1880.0142
GLY 1890.0164
THR 1900.0184
GLN 1910.0119
GLN 1910.0119
THR 1920.0051
TYR 1930.0049
ILE 1940.0046
CYS 1950.0057
CYS 1950.0058
ASN 1960.0032
VAL 1970.0035
ASN 1980.0025
ASN 1980.0025
HIS 1990.0031
LYS 2000.0039
PRO 2010.0034
SER 2020.0042
ASN 2030.0050
THR 2040.0039
LYS 2050.0037
VAL 2060.0038
ASP 2070.0046
LYS 2080.0063
LYS 2090.0056
VAL 2100.0046
GLU 2110.0123
PRO 2120.0069
LYS 2130.0056
SER 2140.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.