CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0563
ALA 10.0281
ASP 20.0133
VAL 30.0090
VAL 40.0089
MET 50.0068
THR 60.0065
GLN 70.0087
THR 80.0107
PRO 90.0116
SER 100.0116
SER 100.0116
SER 110.0053
VAL 120.0033
VAL 120.0031
SER 130.0110
SER 130.0108
ALA 140.0144
ALA 150.0156
VAL 160.0101
GLY 170.0153
GLY 180.0163
THR 190.0088
VAL 200.0044
THR 210.0039
THR 210.0038
ILE 220.0055
ASN 230.0056
CYS 240.0040
CYS 240.0038
GLN 250.0070
GLN 250.0069
ALA 260.0086
SER 270.0126
GLN 280.0108
SER 290.0103
ILE 300.0092
SER 310.0091
SER 310.0091
ALA 320.0062
TYR 330.0060
LEU 340.0040
ALA 350.0030
TRP 360.0016
TYR 370.0056
GLN 380.0059
GLN 390.0061
LYS 400.0092
PRO 410.0122
GLY 420.0168
GLN 430.0094
PRO 440.0077
PRO 450.0065
LYS 460.0018
LEU 470.0025
LEU 480.0035
ILE 490.0059
ILE 490.0059
TYR 500.0064
ASP 510.0082
ALA 520.0060
SER 530.0100
ASP 540.0122
LEU 550.0118
ALA 560.0114
SER 570.0162
SER 570.0162
GLY 580.0079
VAL 590.0076
SER 600.0114
SER 610.0075
ARG 620.0090
PHE 630.0062
LYS 640.0062
GLY 650.0064
SER 660.0078
GLY 670.0051
SER 680.0047
GLY 690.0074
THR 700.0060
GLN 710.0041
PHE 720.0033
THR 730.0046
LEU 740.0037
THR 750.0036
ILE 760.0035
SER 770.0069
SER 770.0069
ASP 780.0096
LEU 790.0078
GLU 800.0050
CYS 810.0030
ALA 820.0060
ASP 830.0038
ALA 840.0024
ALA 850.0041
THR 860.0045
TYR 870.0044
TYR 880.0019
CYS 890.0019
CYS 890.0019
GLN 900.0022
THR 910.0068
TYR 920.0065
TYR 930.0062
ALA 940.0176
ILE 950.0106
ILE 960.0127
THR 970.0214
TYR 980.0066
GLY 990.0090
ALA 1000.0097
ALA 1010.0075
PHE 1020.0041
GLY 1030.0036
GLY 1040.0055
GLY 1050.0050
THR 1060.0065
GLU 1070.0043
GLU 1070.0043
VAL 1080.0020
VAL 1090.0082
VAL 1100.0065
LYS 1110.0142
ARG 1120.0099
THR 1130.0080
VAL 1140.0076
ALA 1150.0092
ALA 1160.0109
PRO 1170.0106
SER 1180.0051
SER 1180.0051
VAL 1190.0050
PHE 1200.0070
ILE 1210.0068
PHE 1220.0068
PRO 1230.0058
PRO 1240.0097
SER 1250.0107
ASP 1260.0079
GLU 1270.0173
GLN 1280.0113
LEU 1290.0048
LYS 1300.0216
SER 1310.0196
GLY 1320.0170
THR 1330.0054
ALA 1340.0041
SER 1350.0026
VAL 1360.0062
VAL 1370.0080
CYS 1380.0085
LEU 1390.0071
LEU 1400.0051
ASN 1410.0041
ASN 1420.0050
ASN 1420.0050
PHE 1430.0040
TYR 1440.0033
PRO 1450.0029
ARG 1460.0029
GLU 1470.0060
ALA 1480.0096
LYS 1490.0110
VAL 1500.0108
GLN 1510.0097
TRP 1520.0073
LYS 1530.0030
VAL 1540.0089
ASP 1550.0114
ASN 1560.0152
ALA 1570.0071
LEU 1580.0049
GLN 1590.0123
SER 1600.0210
GLY 1610.0176
ASN 1620.0114
SER 1630.0169
GLN 1640.0137
GLU 1650.0117
SER 1660.0080
SER 1660.0081
VAL 1670.0072
VAL 1670.0072
THR 1680.0076
GLU 1690.0109
GLU 1690.0109
GLN 1700.0095
ASP 1710.0093
SER 1720.0068
LYS 1730.0069
ASP 1740.0110
CYS 1750.0088
THR 1760.0064
TYR 1770.0058
SER 1780.0011
LEU 1790.0047
SER 1800.0075
SER 1810.0114
THR 1820.0107
LEU 1830.0095
THR 1840.0043
LEU 1850.0060
SER 1860.0094
LYS 1870.0126
ALA 1880.0161
ASP 1890.0111
TYR 1900.0107
GLU 1910.0155
LYS 1920.0149
HIS 1930.0140
LYS 1940.0069
LYS 1940.0069
VAL 1950.0073
TYR 1960.0068
ALA 1970.0039
CYS 1980.0051
CYS 1980.0050
GLU 1990.0076
VAL 2000.0105
THR 2010.0140
HIS 2020.0106
GLN 2030.0125
GLY 2040.0153
LEU 2050.0166
SER 2060.0139
SER 2070.0204
PRO 2080.0164
VAL 2090.0075
THR 2100.0032
LYS 2110.0011
SER 2120.0041
PHE 2130.0073
ASN 2140.0104
ARG 2150.0075
GLY 2160.0067
GLU 2170.0563
SER 20.0277
VAL 30.0244
GLU 40.0233
GLU 50.0125
SER 60.0116
GLY 70.0147
GLY 80.0104
ARG 90.0105
LEU 100.0083
VAL 110.0046
THR 120.0073
PRO 130.0080
GLY 140.0117
THR 150.0070
PRO 160.0115
LEU 170.0110
THR 180.0114
LEU 190.0101
THR 200.0138
CYS 210.0150
THR 220.0130
VAL 230.0263
SER 240.0307
GLY 250.0353
PHE 260.0237
SER 270.0130
LEU 280.0101
SER 290.0033
SER 290.0032
ASP 300.0071
TYR 310.0147
ALA 320.0109
MET 330.0120
SER 340.0112
TRP 350.0034
VAL 360.0046
ARG 370.0060
GLN 380.0104
ALA 390.0144
PRO 400.0157
GLY 410.0173
LYS 420.0082
GLY 430.0094
LEU 440.0045
GLU 450.0067
TRP 460.0100
ILE 470.0136
GLY 480.0096
ILE 490.0107
ILE 500.0190
TYR 510.0165
ALA 520.0160
SER 530.0279
GLY 540.0310
SER 550.0263
THR 560.0196
THR 560.0196
TYR 570.0176
TYR 580.0225
ALA 590.0297
SER 600.0306
TRP 610.0271
ALA 620.0284
LYS 630.0294
GLY 640.0256
ARG 650.0230
PHE 660.0179
THR 670.0141
ILE 680.0110
SER 690.0132
LYS 700.0181
THR 710.0144
SER 720.0046
THR 730.0101
THR 740.0120
VAL 750.0128
ASP 760.0119
LEU 770.0106
LYS 780.0107
ILE 790.0104
THR 800.0186
SER 810.0153
PRO 820.0105
THR 830.0074
THR 840.0065
GLU 850.0143
ASP 860.0083
THR 870.0095
ALA 880.0134
THR 890.0101
TYR 900.0101
PHE 910.0102
CYS 920.0155
CYS 920.0154
ALA 930.0178
ARG 940.0198
TYR 950.0166
TYR 960.0165
TYR 960.0165
ALA 970.0172
GLY 980.0116
SER 990.0133
ASP 1000.0134
ILE 1010.0199
ILE 1010.0199
TRP 1020.0180
GLY 1030.0175
PRO 1040.0116
GLY 1050.0120
THR 1060.0117
LEU 1070.0086
LEU 1070.0086
VAL 1080.0081
THR 1090.0080
VAL 1100.0063
SER 1110.0119
SER 1120.0182
ALA 1130.0083
SER 1140.0039
THR 1150.0030
LYS 1160.0061
GLY 1170.0075
PRO 1180.0078
SER 1190.0057
VAL 1200.0075
PHE 1210.0087
PRO 1220.0035
LEU 1230.0040
ALA 1240.0043
PRO 1250.0085
SER 1260.0105
GLY 1330.0065
THR 1340.0057
THR 1340.0056
ALA 1350.0079
ALA 1360.0061
LEU 1370.0044
GLY 1380.0052
CYS 1390.0053
CYS 1390.0053
LEU 1400.0049
VAL 1410.0056
LYS 1420.0053
ASP 1430.0062
TYR 1440.0071
PHE 1450.0018
PRO 1460.0027
GLU 1470.0031
GLU 1470.0030
PRO 1480.0063
VAL 1490.0068
THR 1500.0098
VAL 1510.0039
SER 1520.0018
TRP 1530.0017
ASN 1540.0060
SER 1550.0059
GLY 1560.0056
ALA 1570.0062
LEU 1580.0066
THR 1590.0071
SER 1600.0054
SER 1600.0054
GLY 1610.0032
VAL 1620.0037
HIS 1630.0047
THR 1640.0044
PHE 1650.0027
PRO 1660.0061
ALA 1670.0043
VAL 1680.0037
VAL 1680.0037
LEU 1690.0055
GLN 1700.0040
SER 1710.0072
SER 1720.0095
GLY 1730.0101
LEU 1740.0075
TYR 1750.0048
SER 1760.0052
SER 1760.0052
LEU 1770.0051
SER 1780.0036
SER 1780.0036
SER 1790.0041
VAL 1800.0033
VAL 1810.0042
THR 1820.0038
VAL 1830.0037
PRO 1840.0041
SER 1850.0067
SER 1850.0067
SER 1860.0062
SER 1870.0059
LEU 1880.0055
GLY 1890.0034
THR 1900.0096
GLN 1910.0109
GLN 1910.0110
THR 1920.0131
TYR 1930.0091
ILE 1940.0071
CYS 1950.0055
CYS 1950.0056
ASN 1960.0039
VAL 1970.0062
ASN 1980.0077
ASN 1980.0078
HIS 1990.0077
LYS 2000.0074
PRO 2010.0082
SER 2020.0141
ASN 2030.0147
THR 2040.0135
LYS 2050.0108
VAL 2060.0080
ASP 2070.0080
LYS 2080.0076
LYS 2090.0071
VAL 2100.0068
GLU 2110.0081
PRO 2120.0104
LYS 2130.0109
SER 2140.0216

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.