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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0231
ALA 10.0197
ASP 20.0158
VAL 30.0152
VAL 40.0139
MET 50.0113
THR 60.0125
GLN 70.0095
THR 80.0105
PRO 90.0112
SER 100.0113
SER 100.0113
SER 110.0112
VAL 120.0100
VAL 120.0100
SER 130.0107
SER 130.0107
ALA 140.0110
ALA 150.0126
VAL 160.0124
GLY 170.0114
GLY 180.0101
THR 190.0070
VAL 200.0066
THR 210.0050
THR 210.0051
ILE 220.0056
ASN 230.0076
CYS 240.0089
CYS 240.0087
GLN 250.0128
GLN 250.0126
ALA 260.0140
SER 270.0174
GLN 280.0191
SER 290.0185
ILE 300.0159
SER 310.0168
SER 310.0168
ALA 320.0140
TYR 330.0127
LEU 340.0089
ALA 350.0059
TRP 360.0025
TYR 370.0019
GLN 380.0048
GLN 390.0070
LYS 400.0099
PRO 410.0120
GLY 420.0126
GLN 430.0110
PRO 440.0082
PRO 450.0055
LYS 460.0069
LEU 470.0062
LEU 480.0058
ILE 490.0064
ILE 490.0065
TYR 500.0090
ASP 510.0116
ALA 520.0091
SER 530.0089
ASP 540.0107
LEU 550.0096
ALA 560.0110
SER 570.0143
SER 570.0143
GLY 580.0145
VAL 590.0107
SER 600.0097
SER 610.0075
ARG 620.0059
PHE 630.0038
LYS 640.0034
GLY 650.0046
SER 660.0070
GLY 670.0106
SER 680.0137
GLY 690.0163
THR 700.0153
GLN 710.0126
PHE 720.0088
THR 730.0054
LEU 740.0019
THR 750.0014
ILE 760.0042
SER 770.0058
SER 770.0058
ASP 780.0088
LEU 790.0098
GLU 800.0111
CYS 810.0121
ALA 820.0110
ASP 830.0098
ALA 840.0105
ALA 850.0093
THR 860.0074
TYR 870.0044
TYR 880.0031
CYS 890.0041
CYS 890.0042
GLN 900.0057
THR 910.0096
TYR 920.0112
TYR 930.0149
ALA 940.0174
ILE 950.0142
ILE 960.0167
THR 970.0186
TYR 980.0161
GLY 990.0122
ALA 1000.0091
ALA 1010.0083
PHE 1020.0060
GLY 1030.0075
GLY 1040.0090
GLY 1050.0073
THR 1060.0076
GLU 1070.0093
GLU 1070.0092
VAL 1080.0094
VAL 1090.0114
VAL 1100.0121
LYS 1110.0135
ARG 1120.0141
THR 1130.0124
VAL 1140.0102
ALA 1150.0077
ALA 1160.0046
PRO 1170.0032
SER 1180.0009
SER 1180.0009
VAL 1190.0023
PHE 1200.0040
ILE 1210.0062
PHE 1220.0065
PRO 1230.0090
PRO 1240.0080
SER 1250.0091
ASP 1260.0117
GLU 1270.0095
GLN 1280.0063
LEU 1290.0096
LYS 1300.0094
SER 1310.0062
GLY 1320.0097
THR 1330.0083
ALA 1340.0083
SER 1350.0058
VAL 1360.0068
VAL 1370.0038
CYS 1380.0040
LEU 1390.0013
LEU 1400.0029
ASN 1410.0040
ASN 1420.0072
ASN 1420.0073
PHE 1430.0076
TYR 1440.0098
PRO 1450.0115
ARG 1460.0118
GLU 1470.0120
ALA 1480.0103
LYS 1490.0115
VAL 1500.0103
GLN 1510.0135
TRP 1520.0136
LYS 1530.0168
VAL 1540.0182
ASP 1550.0217
ASN 1560.0219
ALA 1570.0225
LEU 1580.0205
GLN 1590.0184
SER 1600.0182
GLY 1610.0179
ASN 1620.0143
SER 1630.0111
GLN 1640.0104
GLU 1650.0097
SER 1660.0093
SER 1660.0094
VAL 1670.0101
VAL 1670.0101
THR 1680.0111
GLU 1690.0125
GLU 1690.0125
GLN 1700.0124
ASP 1710.0121
SER 1720.0112
LYS 1730.0121
ASP 1740.0119
CYS 1750.0123
THR 1760.0108
TYR 1770.0102
SER 1780.0074
LEU 1790.0067
SER 1800.0049
SER 1810.0066
THR 1820.0061
LEU 1830.0091
THR 1840.0094
LEU 1850.0123
SER 1860.0129
LYS 1870.0133
ALA 1880.0172
ASP 1890.0180
TYR 1900.0159
GLU 1910.0189
LYS 1920.0220
HIS 1930.0212
LYS 1940.0209
LYS 1940.0209
VAL 1950.0187
TYR 1960.0146
ALA 1970.0131
CYS 1980.0101
CYS 1980.0102
GLU 1990.0104
VAL 2000.0082
THR 2010.0097
HIS 2020.0083
GLN 2030.0094
GLY 2040.0061
LEU 2050.0052
SER 2060.0068
SER 2070.0094
PRO 2080.0098
VAL 2090.0079
THR 2100.0101
LYS 2110.0095
SER 2120.0125
PHE 2130.0145
ASN 2140.0184
ARG 2150.0178
GLY 2160.0200
GLU 2170.0209
SER 20.0164
VAL 30.0138
GLU 40.0134
GLU 50.0105
SER 60.0117
GLY 70.0107
GLY 80.0106
ARG 90.0125
LEU 100.0137
VAL 110.0125
THR 120.0135
PRO 130.0125
GLY 140.0105
THR 150.0093
PRO 160.0063
LEU 170.0064
THR 180.0052
LEU 190.0065
THR 200.0088
CYS 210.0101
THR 220.0141
VAL 230.0159
SER 240.0196
GLY 250.0219
PHE 260.0204
SER 270.0204
LEU 280.0174
SER 290.0207
SER 290.0207
ASP 300.0206
TYR 310.0166
ALA 320.0134
MET 330.0098
SER 340.0061
TRP 350.0024
VAL 360.0007
ARG 370.0044
GLN 380.0075
ALA 390.0105
PRO 400.0130
GLY 410.0140
LYS 420.0115
GLY 430.0082
LEU 440.0049
GLU 450.0053
TRP 460.0042
ILE 470.0046
GLY 480.0065
ILE 490.0086
ILE 500.0111
TYR 510.0149
ALA 520.0177
SER 530.0196
GLY 540.0161
SER 550.0156
THR 560.0120
THR 560.0120
TYR 570.0119
TYR 580.0097
ALA 590.0101
SER 600.0134
TRP 610.0122
ALA 620.0087
LYS 630.0107
GLY 640.0098
ARG 650.0075
PHE 660.0041
THR 670.0041
ILE 680.0057
SER 690.0086
LYS 700.0117
THR 710.0148
SER 720.0184
THR 730.0173
THR 740.0134
VAL 750.0097
ASP 760.0065
LEU 770.0027
LYS 780.0014
ILE 790.0038
THR 800.0043
SER 810.0078
PRO 820.0091
THR 830.0118
THR 840.0137
GLU 850.0121
ASP 860.0096
THR 870.0115
ALA 880.0100
THR 890.0091
TYR 900.0058
PHE 910.0052
CYS 920.0059
CYS 920.0060
ALA 930.0072
ARG 940.0105
TYR 950.0111
TYR 960.0139
TYR 960.0140
ALA 970.0127
GLY 980.0090
SER 990.0077
ASP 1000.0100
ILE 1010.0111
ILE 1010.0110
TRP 1020.0089
GLY 1030.0107
PRO 1040.0120
GLY 1050.0095
THR 1060.0105
LEU 1070.0117
LEU 1070.0117
VAL 1080.0112
THR 1090.0132
VAL 1100.0127
SER 1110.0147
SER 1120.0158
ALA 1130.0148
SER 1140.0150
THR 1150.0144
LYS 1160.0103
GLY 1170.0097
PRO 1180.0073
SER 1190.0046
VAL 1200.0060
PHE 1210.0054
PRO 1220.0075
LEU 1230.0060
ALA 1240.0096
PRO 1250.0105
SER 1260.0116
GLY 1330.0126
THR 1340.0103
THR 1340.0103
ALA 1350.0098
ALA 1360.0073
LEU 1370.0080
GLY 1380.0068
CYS 1390.0062
CYS 1390.0062
LEU 1400.0033
VAL 1410.0053
LYS 1420.0041
ASP 1430.0060
TYR 1440.0090
PHE 1450.0130
PRO 1460.0140
GLU 1470.0141
GLU 1470.0140
PRO 1480.0139
VAL 1490.0120
THR 1500.0128
VAL 1510.0130
SER 1520.0152
TRP 1530.0152
ASN 1540.0186
SER 1550.0204
GLY 1560.0206
ALA 1570.0217
LEU 1580.0180
THR 1590.0170
SER 1600.0145
SER 1600.0145
GLY 1610.0111
VAL 1620.0114
HIS 1630.0093
THR 1640.0099
PHE 1650.0092
PRO 1660.0115
ALA 1670.0109
VAL 1680.0108
VAL 1680.0108
LEU 1690.0118
GLN 1700.0103
SER 1710.0122
SER 1720.0103
GLY 1730.0120
LEU 1740.0097
TYR 1750.0094
SER 1760.0070
SER 1760.0070
LEU 1770.0069
SER 1780.0051
SER 1780.0051
SER 1790.0074
VAL 1800.0067
VAL 1810.0092
THR 1820.0092
VAL 1830.0126
PRO 1840.0148
SER 1850.0148
SER 1850.0148
SER 1860.0189
SER 1870.0190
LEU 1880.0175
GLY 1890.0213
THR 1900.0231
GLN 1910.0211
GLN 1910.0210
THR 1920.0194
TYR 1930.0158
ILE 1940.0150
CYS 1950.0126
CYS 1950.0125
ASN 1960.0139
VAL 1970.0118
ASN 1980.0137
ASN 1980.0136
HIS 1990.0129
LYS 2000.0158
PRO 2010.0154
SER 2020.0135
ASN 2030.0151
THR 2040.0126
LYS 2050.0138
VAL 2060.0122
ASP 2070.0140
LYS 2080.0124
LYS 2090.0145
VAL 2100.0124
GLU 2110.0148
PRO 2120.0153
LYS 2130.0158
SER 2140.0200

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.