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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0967
ALA 10.0138
ASP 20.0108
VAL 30.0053
VAL 40.0059
MET 50.0055
THR 60.0049
GLN 70.0042
THR 80.0053
PRO 90.0069
SER 100.0068
SER 100.0068
SER 110.0063
VAL 120.0057
VAL 120.0058
SER 130.0042
SER 130.0042
ALA 140.0062
ALA 150.0103
VAL 160.0087
GLY 170.0137
GLY 180.0109
THR 190.0088
VAL 200.0071
THR 210.0087
THR 210.0086
ILE 220.0050
ASN 230.0035
CYS 240.0046
CYS 240.0045
GLN 250.0041
GLN 250.0043
ALA 260.0041
SER 270.0027
GLN 280.0036
SER 290.0063
ILE 300.0078
SER 310.0122
SER 310.0122
ALA 320.0144
TYR 330.0140
LEU 340.0087
ALA 350.0081
TRP 360.0066
TYR 370.0020
GLN 380.0017
GLN 390.0019
LYS 400.0054
PRO 410.0127
GLY 420.0178
GLN 430.0094
PRO 440.0059
PRO 450.0031
LYS 460.0056
LEU 470.0061
LEU 480.0044
ILE 490.0084
ILE 490.0084
TYR 500.0097
ASP 510.0106
ALA 520.0119
SER 530.0094
ASP 540.0080
LEU 550.0106
ALA 560.0174
SER 570.0225
SER 570.0226
GLY 580.0193
VAL 590.0089
SER 600.0155
SER 610.0109
ARG 620.0090
PHE 630.0051
LYS 640.0040
GLY 650.0057
SER 660.0066
GLY 670.0069
SER 680.0103
GLY 690.0106
THR 700.0044
GLN 710.0034
PHE 720.0056
THR 730.0062
LEU 740.0056
THR 750.0053
ILE 760.0097
SER 770.0102
SER 770.0103
ASP 780.0100
LEU 790.0078
GLU 800.0055
CYS 810.0041
ALA 820.0076
ASP 830.0095
ALA 840.0097
ALA 850.0062
THR 860.0060
TYR 870.0060
TYR 880.0034
CYS 890.0040
CYS 890.0040
GLN 900.0038
THR 910.0074
TYR 920.0076
TYR 930.0062
ALA 940.0039
ILE 950.0040
ILE 960.0086
THR 970.0110
TYR 980.0073
GLY 990.0096
ALA 1000.0051
ALA 1010.0055
PHE 1020.0057
GLY 1030.0042
GLY 1040.0023
GLY 1050.0021
THR 1060.0085
GLU 1070.0082
GLU 1070.0082
VAL 1080.0067
VAL 1090.0085
VAL 1100.0047
LYS 1110.0100
ARG 1120.0114
THR 1130.0152
VAL 1140.0151
ALA 1150.0119
ALA 1160.0088
PRO 1170.0091
SER 1180.0038
SER 1180.0037
VAL 1190.0025
PHE 1200.0018
ILE 1210.0040
PHE 1220.0033
PRO 1230.0028
PRO 1240.0031
SER 1250.0039
ASP 1260.0075
GLU 1270.0058
GLN 1280.0042
LEU 1290.0033
LYS 1300.0085
SER 1310.0079
GLY 1320.0067
THR 1330.0036
ALA 1340.0026
SER 1350.0017
VAL 1360.0028
VAL 1370.0036
CYS 1380.0053
LEU 1390.0036
LEU 1400.0052
ASN 1410.0052
ASN 1420.0132
ASN 1420.0132
PHE 1430.0115
TYR 1440.0113
PRO 1450.0078
ARG 1460.0107
GLU 1470.0109
ALA 1480.0090
LYS 1490.0112
VAL 1500.0045
GLN 1510.0049
TRP 1520.0035
LYS 1530.0010
VAL 1540.0036
ASP 1550.0069
ASN 1560.0162
ALA 1570.0113
LEU 1580.0088
GLN 1590.0085
SER 1600.0066
GLY 1610.0072
ASN 1620.0071
SER 1630.0101
GLN 1640.0087
GLU 1650.0062
SER 1660.0089
SER 1660.0090
VAL 1670.0100
VAL 1670.0101
THR 1680.0099
GLU 1690.0126
GLU 1690.0125
GLN 1700.0112
ASP 1710.0105
SER 1720.0137
LYS 1730.0169
ASP 1740.0221
CYS 1750.0166
THR 1760.0171
TYR 1770.0181
SER 1780.0097
LEU 1790.0085
SER 1800.0068
SER 1810.0063
THR 1820.0045
LEU 1830.0045
THR 1840.0023
LEU 1850.0024
SER 1860.0047
LYS 1870.0067
ALA 1880.0063
ASP 1890.0032
TYR 1900.0027
GLU 1910.0030
LYS 1920.0012
HIS 1930.0030
LYS 1940.0025
LYS 1940.0025
VAL 1950.0028
TYR 1960.0032
ALA 1970.0038
CYS 1980.0049
CYS 1980.0049
GLU 1990.0034
VAL 2000.0020
THR 2010.0075
HIS 2020.0098
GLN 2030.0218
GLY 2040.0236
LEU 2050.0072
SER 2060.0140
SER 2070.0266
PRO 2080.0055
VAL 2090.0043
THR 2100.0042
LYS 2110.0048
SER 2120.0036
PHE 2130.0022
ASN 2140.0028
ARG 2150.0028
GLY 2160.0053
GLU 2170.0189
SER 20.0068
VAL 30.0051
GLU 40.0102
GLU 50.0075
SER 60.0107
GLY 70.0090
GLY 80.0076
ARG 90.0072
LEU 100.0077
VAL 110.0079
THR 120.0087
PRO 130.0088
GLY 140.0038
THR 150.0042
PRO 160.0045
LEU 170.0020
THR 180.0038
LEU 190.0048
THR 200.0101
CYS 210.0083
THR 220.0127
VAL 230.0102
SER 240.0114
GLY 250.0165
PHE 260.0175
SER 270.0142
LEU 280.0092
SER 290.0160
SER 290.0161
ASP 300.0141
TYR 310.0103
ALA 320.0080
MET 330.0078
SER 340.0082
TRP 350.0034
VAL 360.0040
ARG 370.0037
GLN 380.0050
ALA 390.0014
PRO 400.0040
GLY 410.0086
LYS 420.0048
GLY 430.0092
LEU 440.0054
GLU 450.0056
TRP 460.0055
ILE 470.0059
GLY 480.0060
ILE 490.0066
ILE 500.0086
TYR 510.0099
ALA 520.0130
SER 530.0305
GLY 540.0223
SER 550.0135
THR 560.0074
THR 560.0074
TYR 570.0066
TYR 580.0037
ALA 590.0051
SER 600.0044
TRP 610.0032
ALA 620.0038
LYS 630.0075
GLY 640.0123
ARG 650.0084
PHE 660.0057
THR 670.0042
ILE 680.0051
SER 690.0048
LYS 700.0058
THR 710.0214
SER 720.0241
THR 730.0185
THR 740.0116
VAL 750.0061
ASP 760.0067
LEU 770.0032
LYS 780.0034
ILE 790.0037
THR 800.0066
SER 810.0049
PRO 820.0052
THR 830.0109
THR 840.0113
GLU 850.0118
ASP 860.0052
THR 870.0037
ALA 880.0030
THR 890.0028
TYR 900.0024
PHE 910.0030
CYS 920.0040
CYS 920.0039
ALA 930.0066
ARG 940.0093
TYR 950.0109
TYR 960.0186
TYR 960.0187
ALA 970.0166
GLY 980.0067
SER 990.0062
ASP 1000.0079
ILE 1010.0053
ILE 1010.0053
TRP 1020.0035
GLY 1030.0014
PRO 1040.0068
GLY 1050.0054
THR 1060.0057
LEU 1070.0050
LEU 1070.0050
VAL 1080.0049
THR 1090.0050
VAL 1100.0101
SER 1110.0113
SER 1120.0114
ALA 1130.0142
SER 1140.0136
THR 1150.0095
LYS 1160.0063
GLY 1170.0090
PRO 1180.0102
SER 1190.0049
VAL 1200.0034
PHE 1210.0038
PRO 1220.0073
LEU 1230.0073
ALA 1240.0075
PRO 1250.0101
SER 1260.0094
GLY 1330.0178
THR 1340.0176
THR 1340.0176
ALA 1350.0167
ALA 1360.0121
LEU 1370.0118
GLY 1380.0123
CYS 1390.0059
CYS 1390.0060
LEU 1400.0037
VAL 1410.0049
LYS 1420.0066
ASP 1430.0058
TYR 1440.0074
PHE 1450.0055
PRO 1460.0060
GLU 1470.0075
GLU 1470.0075
PRO 1480.0025
VAL 1490.0052
THR 1500.0059
VAL 1510.0056
SER 1520.0043
TRP 1530.0024
ASN 1540.0113
SER 1550.0212
GLY 1560.0224
ALA 1570.0247
LEU 1580.0093
THR 1590.0075
SER 1600.0175
SER 1600.0175
GLY 1610.0196
VAL 1620.0167
HIS 1630.0070
THR 1640.0086
PHE 1650.0095
PRO 1660.0163
ALA 1670.0163
VAL 1680.0163
VAL 1680.0162
LEU 1690.0190
GLN 1700.0189
SER 1710.0254
SER 1720.0247
GLY 1730.0143
LEU 1740.0075
TYR 1750.0103
SER 1760.0097
SER 1760.0097
LEU 1770.0097
SER 1780.0073
SER 1780.0073
SER 1790.0079
VAL 1800.0082
VAL 1810.0146
THR 1820.0142
VAL 1830.0134
PRO 1840.0174
SER 1850.0163
SER 1850.0163
SER 1860.0121
SER 1870.0056
LEU 1880.0030
GLY 1890.0080
THR 1900.0099
GLN 1910.0040
GLN 1910.0039
THR 1920.0105
TYR 1930.0058
ILE 1940.0069
CYS 1950.0071
CYS 1950.0071
ASN 1960.0097
VAL 1970.0086
ASN 1980.0073
ASN 1980.0073
HIS 1990.0062
LYS 2000.0122
PRO 2010.0145
SER 2020.0273
ASN 2030.0359
THR 2040.0249
LYS 2050.0124
VAL 2060.0130
ASP 2070.0137
LYS 2080.0094
LYS 2090.0089
VAL 2100.0096
GLU 2110.0086
PRO 2120.0075
LYS 2130.0136
SER 2140.0967

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.