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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0473
ALA 10.0153
ASP 20.0120
VAL 30.0096
VAL 40.0062
MET 50.0032
THR 60.0061
GLN 70.0068
THR 80.0132
PRO 90.0178
SER 100.0250
SER 100.0251
SER 110.0195
VAL 120.0118
VAL 120.0117
SER 130.0080
SER 130.0079
ALA 140.0085
ALA 150.0108
VAL 160.0074
GLY 170.0098
GLY 180.0127
THR 190.0098
VAL 200.0076
THR 210.0055
THR 210.0055
ILE 220.0043
ASN 230.0027
CYS 240.0011
CYS 240.0011
GLN 250.0028
GLN 250.0026
ALA 260.0038
SER 270.0060
GLN 280.0065
SER 290.0084
ILE 300.0058
SER 310.0133
SER 310.0133
ALA 320.0132
TYR 330.0076
LEU 340.0089
ALA 350.0094
TRP 360.0088
TYR 370.0110
GLN 380.0110
GLN 390.0117
LYS 400.0097
PRO 410.0118
GLY 420.0179
GLN 430.0189
PRO 440.0172
PRO 450.0229
LYS 460.0190
LEU 470.0146
LEU 480.0099
ILE 490.0106
ILE 490.0106
TYR 500.0117
ASP 510.0125
ALA 520.0127
SER 530.0128
ASP 540.0142
LEU 550.0153
ALA 560.0194
SER 570.0315
SER 570.0316
GLY 580.0367
VAL 590.0200
SER 600.0288
SER 610.0144
ARG 620.0132
PHE 630.0037
LYS 640.0067
GLY 650.0085
SER 660.0085
GLY 670.0162
SER 680.0157
GLY 690.0141
THR 700.0069
GLN 710.0058
PHE 720.0078
THR 730.0042
LEU 740.0051
THR 750.0040
ILE 760.0053
SER 770.0096
SER 770.0096
ASP 780.0120
LEU 790.0067
GLU 800.0087
CYS 810.0111
ALA 820.0063
ASP 830.0033
ALA 840.0043
ALA 850.0081
THR 860.0062
TYR 870.0049
TYR 880.0050
CYS 890.0034
CYS 890.0034
GLN 900.0036
THR 910.0052
TYR 920.0043
TYR 930.0046
ALA 940.0173
ILE 950.0152
ILE 960.0180
THR 970.0177
TYR 980.0085
GLY 990.0130
ALA 1000.0055
ALA 1010.0055
PHE 1020.0063
GLY 1030.0021
GLY 1040.0017
GLY 1050.0056
THR 1060.0141
GLU 1070.0143
GLU 1070.0143
VAL 1080.0101
VAL 1090.0079
VAL 1100.0093
LYS 1110.0120
ARG 1120.0230
THR 1130.0192
VAL 1140.0131
ALA 1150.0069
ALA 1160.0108
PRO 1170.0097
SER 1180.0056
SER 1180.0056
VAL 1190.0038
PHE 1200.0029
ILE 1210.0019
PHE 1220.0019
PRO 1230.0029
PRO 1240.0032
SER 1250.0051
ASP 1260.0048
GLU 1270.0028
GLN 1280.0019
LEU 1290.0011
LYS 1300.0042
SER 1310.0045
GLY 1320.0088
THR 1330.0023
ALA 1340.0009
SER 1350.0015
VAL 1360.0009
VAL 1370.0016
CYS 1380.0028
LEU 1390.0060
LEU 1400.0057
ASN 1410.0057
ASN 1420.0045
ASN 1420.0045
PHE 1430.0020
TYR 1440.0051
PRO 1450.0076
ARG 1460.0046
GLU 1470.0064
ALA 1480.0072
LYS 1490.0075
VAL 1500.0074
GLN 1510.0059
TRP 1520.0024
LYS 1530.0010
VAL 1540.0045
ASP 1550.0053
ASN 1560.0089
ALA 1570.0097
LEU 1580.0100
GLN 1590.0106
SER 1600.0053
GLY 1610.0089
ASN 1620.0072
SER 1630.0054
GLN 1640.0054
GLU 1650.0063
SER 1660.0041
SER 1660.0040
VAL 1670.0039
VAL 1670.0039
THR 1680.0058
GLU 1690.0093
GLU 1690.0093
GLN 1700.0102
ASP 1710.0106
SER 1720.0213
LYS 1730.0148
ASP 1740.0092
CYS 1750.0127
THR 1760.0071
TYR 1770.0036
SER 1780.0057
LEU 1790.0055
SER 1800.0064
SER 1810.0052
THR 1820.0036
LEU 1830.0028
THR 1840.0017
LEU 1850.0011
SER 1860.0012
LYS 1870.0017
ALA 1880.0015
ASP 1890.0039
TYR 1900.0037
GLU 1910.0049
LYS 1920.0068
HIS 1930.0024
LYS 1940.0041
LYS 1940.0041
VAL 1950.0064
TYR 1960.0029
ALA 1970.0028
CYS 1980.0014
CYS 1980.0014
GLU 1990.0054
VAL 2000.0051
THR 2010.0105
HIS 2020.0144
GLN 2030.0155
GLY 2040.0141
LEU 2050.0216
SER 2060.0239
SER 2070.0294
PRO 2080.0122
VAL 2090.0056
THR 2100.0103
LYS 2110.0061
SER 2120.0066
PHE 2130.0073
ASN 2140.0063
ARG 2150.0038
GLY 2160.0049
GLU 2170.0156
SER 20.0012
VAL 30.0038
GLU 40.0065
GLU 50.0059
SER 60.0104
GLY 70.0146
GLY 80.0177
ARG 90.0175
LEU 100.0174
VAL 110.0194
THR 120.0218
PRO 130.0267
GLY 140.0237
THR 150.0145
PRO 160.0084
LEU 170.0073
THR 180.0084
LEU 190.0108
THR 200.0148
CYS 210.0112
THR 220.0103
VAL 230.0091
SER 240.0074
GLY 250.0066
PHE 260.0084
SER 270.0079
LEU 280.0065
SER 290.0158
SER 290.0159
ASP 300.0108
TYR 310.0095
ALA 320.0091
MET 330.0104
SER 340.0117
TRP 350.0076
VAL 360.0101
ARG 370.0118
GLN 380.0220
ALA 390.0263
PRO 400.0327
GLY 410.0355
LYS 420.0307
GLY 430.0304
LEU 440.0179
GLU 450.0149
TRP 460.0125
ILE 470.0119
GLY 480.0099
ILE 490.0127
ILE 500.0134
TYR 510.0136
ALA 520.0083
SER 530.0444
GLY 540.0188
SER 550.0162
THR 560.0120
THR 560.0120
TYR 570.0131
TYR 580.0123
ALA 590.0191
SER 600.0250
TRP 610.0155
ALA 620.0126
LYS 630.0307
GLY 640.0473
ARG 650.0232
PHE 660.0128
THR 670.0068
ILE 680.0126
SER 690.0100
LYS 700.0082
THR 710.0230
SER 720.0197
THR 730.0154
THR 740.0134
VAL 750.0146
ASP 760.0188
LEU 770.0092
LYS 780.0066
ILE 790.0045
THR 800.0108
SER 810.0136
PRO 820.0147
THR 830.0141
THR 840.0217
GLU 850.0139
ASP 860.0044
THR 870.0079
ALA 880.0068
THR 890.0074
TYR 900.0049
PHE 910.0057
CYS 920.0090
CYS 920.0089
ALA 930.0091
ARG 940.0096
TYR 950.0056
TYR 960.0114
TYR 960.0114
ALA 970.0111
GLY 980.0044
SER 990.0034
ASP 1000.0058
ILE 1010.0085
ILE 1010.0085
TRP 1020.0099
GLY 1030.0110
PRO 1040.0122
GLY 1050.0061
THR 1060.0043
LEU 1070.0107
LEU 1070.0108
VAL 1080.0126
THR 1090.0126
VAL 1100.0207
SER 1110.0218
SER 1120.0203
ALA 1130.0126
SER 1140.0076
THR 1150.0054
LYS 1160.0088
GLY 1170.0110
PRO 1180.0099
SER 1190.0059
VAL 1200.0054
PHE 1210.0043
PRO 1220.0034
LEU 1230.0039
ALA 1240.0041
PRO 1250.0038
SER 1260.0018
GLY 1330.0179
THR 1340.0129
THR 1340.0129
ALA 1350.0071
ALA 1360.0015
LEU 1370.0017
GLY 1380.0027
CYS 1390.0039
CYS 1390.0038
LEU 1400.0042
VAL 1410.0058
LYS 1420.0080
ASP 1430.0077
TYR 1440.0088
PHE 1450.0021
PRO 1460.0024
GLU 1470.0024
GLU 1470.0024
PRO 1480.0074
VAL 1490.0068
THR 1500.0069
VAL 1510.0021
SER 1520.0011
TRP 1530.0016
ASN 1540.0066
SER 1550.0086
GLY 1560.0073
ALA 1570.0080
LEU 1580.0032
THR 1590.0063
SER 1600.0087
SER 1600.0087
GLY 1610.0063
VAL 1620.0052
HIS 1630.0057
THR 1640.0048
PHE 1650.0046
PRO 1660.0055
ALA 1670.0037
VAL 1680.0030
VAL 1680.0030
LEU 1690.0032
GLN 1700.0099
SER 1710.0223
SER 1720.0162
GLY 1730.0148
LEU 1740.0093
TYR 1750.0052
SER 1760.0052
SER 1760.0052
LEU 1770.0056
SER 1780.0037
SER 1780.0037
SER 1790.0038
VAL 1800.0037
VAL 1810.0038
THR 1820.0037
VAL 1830.0031
PRO 1840.0043
SER 1850.0116
SER 1850.0116
SER 1860.0154
SER 1870.0036
LEU 1880.0047
GLY 1890.0053
THR 1900.0045
GLN 1910.0044
GLN 1910.0044
THR 1920.0049
TYR 1930.0025
ILE 1940.0021
CYS 1950.0018
CYS 1950.0018
ASN 1960.0031
VAL 1970.0022
ASN 1980.0029
ASN 1980.0029
HIS 1990.0049
LYS 2000.0036
PRO 2010.0071
SER 2020.0102
ASN 2030.0048
THR 2040.0035
LYS 2050.0097
VAL 2060.0071
ASP 2070.0051
LYS 2080.0025
LYS 2090.0027
VAL 2100.0041
GLU 2110.0074
PRO 2120.0081
LYS 2130.0096
SER 2140.0432

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.