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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0845
ALA 10.0369
ASP 20.0220
VAL 30.0077
VAL 40.0178
MET 50.0191
THR 60.0253
GLN 70.0108
THR 80.0084
PRO 90.0089
SER 100.0097
SER 100.0098
SER 110.0075
VAL 120.0065
VAL 120.0064
SER 130.0029
SER 130.0028
ALA 140.0054
ALA 150.0071
VAL 160.0102
GLY 170.0140
GLY 180.0156
THR 190.0124
VAL 200.0093
THR 210.0099
THR 210.0097
ILE 220.0098
ASN 230.0113
CYS 240.0148
CYS 240.0149
GLN 250.0246
GLN 250.0244
ALA 260.0192
SER 270.0200
GLN 280.0146
SER 290.0154
ILE 300.0113
SER 310.0108
SER 310.0108
ALA 320.0134
TYR 330.0112
LEU 340.0045
ALA 350.0045
TRP 360.0045
TYR 370.0075
GLN 380.0085
GLN 390.0106
LYS 400.0063
PRO 410.0081
GLY 420.0128
GLN 430.0102
PRO 440.0135
PRO 450.0183
LYS 460.0123
LEU 470.0109
LEU 480.0087
ILE 490.0071
ILE 490.0071
TYR 500.0057
ASP 510.0053
ALA 520.0030
SER 530.0054
ASP 540.0083
LEU 550.0095
ALA 560.0175
SER 570.0201
SER 570.0201
GLY 580.0176
VAL 590.0139
SER 600.0163
SER 610.0156
ARG 620.0110
PHE 630.0099
LYS 640.0102
GLY 650.0096
SER 660.0093
GLY 670.0104
SER 680.0133
GLY 690.0157
THR 700.0165
GLN 710.0174
PHE 720.0162
THR 730.0075
LEU 740.0075
THR 750.0076
ILE 760.0111
SER 770.0128
SER 770.0128
ASP 780.0114
LEU 790.0049
GLU 800.0023
CYS 810.0080
ALA 820.0082
ASP 830.0045
ALA 840.0045
ALA 850.0029
THR 860.0039
TYR 870.0043
TYR 880.0081
CYS 890.0070
CYS 890.0068
GLN 900.0053
THR 910.0098
TYR 920.0096
TYR 930.0077
ALA 940.0206
ILE 950.0147
ILE 960.0218
THR 970.0240
TYR 980.0142
GLY 990.0165
ALA 1000.0045
ALA 1010.0064
PHE 1020.0076
GLY 1030.0100
GLY 1040.0057
GLY 1050.0067
THR 1060.0036
GLU 1070.0034
GLU 1070.0034
VAL 1080.0024
VAL 1090.0047
VAL 1100.0047
LYS 1110.0050
ARG 1120.0257
THR 1130.0235
VAL 1140.0125
ALA 1150.0084
ALA 1160.0080
PRO 1170.0068
SER 1180.0017
SER 1180.0017
VAL 1190.0014
PHE 1200.0011
ILE 1210.0021
PHE 1220.0036
PRO 1230.0044
PRO 1240.0095
SER 1250.0092
ASP 1260.0082
GLU 1270.0094
GLN 1280.0048
LEU 1290.0035
LYS 1300.0107
SER 1310.0056
GLY 1320.0061
THR 1330.0045
ALA 1340.0048
SER 1350.0051
VAL 1360.0011
VAL 1370.0013
CYS 1380.0006
LEU 1390.0026
LEU 1400.0024
ASN 1410.0023
ASN 1420.0047
ASN 1420.0046
PHE 1430.0042
TYR 1440.0076
PRO 1450.0049
ARG 1460.0046
GLU 1470.0058
ALA 1480.0111
LYS 1490.0122
VAL 1500.0055
GLN 1510.0095
TRP 1520.0074
LYS 1530.0069
VAL 1540.0014
ASP 1550.0053
ASN 1560.0116
ALA 1570.0089
LEU 1580.0130
GLN 1590.0143
SER 1600.0106
GLY 1610.0151
ASN 1620.0128
SER 1630.0051
GLN 1640.0033
GLU 1650.0027
SER 1660.0023
SER 1660.0023
VAL 1670.0021
VAL 1670.0021
THR 1680.0024
GLU 1690.0098
GLU 1690.0097
GLN 1700.0089
ASP 1710.0075
SER 1720.0090
LYS 1730.0102
ASP 1740.0139
CYS 1750.0112
THR 1760.0083
TYR 1770.0056
SER 1780.0021
LEU 1790.0019
SER 1800.0025
SER 1810.0016
THR 1820.0017
LEU 1830.0028
THR 1840.0023
LEU 1850.0022
SER 1860.0053
LYS 1870.0064
ALA 1880.0051
ASP 1890.0032
TYR 1900.0034
GLU 1910.0034
LYS 1920.0023
HIS 1930.0020
LYS 1940.0020
LYS 1940.0020
VAL 1950.0038
TYR 1960.0049
ALA 1970.0063
CYS 1980.0070
CYS 1980.0071
GLU 1990.0071
VAL 2000.0021
THR 2010.0090
HIS 2020.0127
GLN 2030.0114
GLY 2040.0117
LEU 2050.0116
SER 2060.0072
SER 2070.0146
PRO 2080.0040
VAL 2090.0053
THR 2100.0081
LYS 2110.0063
SER 2120.0061
PHE 2130.0048
ASN 2140.0030
ARG 2150.0029
GLY 2160.0036
GLU 2170.0104
SER 20.0116
VAL 30.0067
GLU 40.0075
GLU 50.0079
SER 60.0150
GLY 70.0204
GLY 80.0159
ARG 90.0131
LEU 100.0097
VAL 110.0121
THR 120.0128
PRO 130.0170
GLY 140.0203
THR 150.0115
PRO 160.0047
LEU 170.0138
THR 180.0140
LEU 190.0146
THR 200.0105
CYS 210.0080
THR 220.0119
VAL 230.0100
SER 240.0083
GLY 250.0085
PHE 260.0135
SER 270.0129
LEU 280.0087
SER 290.0207
SER 290.0208
ASP 300.0193
TYR 310.0104
ALA 320.0029
MET 330.0020
SER 340.0020
TRP 350.0040
VAL 360.0044
ARG 370.0056
GLN 380.0236
ALA 390.0354
PRO 400.0495
GLY 410.0541
LYS 420.0331
GLY 430.0304
LEU 440.0158
GLU 450.0121
TRP 460.0074
ILE 470.0029
GLY 480.0018
ILE 490.0025
ILE 500.0039
TYR 510.0052
ALA 520.0130
SER 530.0203
GLY 540.0164
SER 550.0133
THR 560.0047
THR 560.0048
TYR 570.0028
TYR 580.0017
ALA 590.0071
SER 600.0094
TRP 610.0123
ALA 620.0136
LYS 630.0106
GLY 640.0199
ARG 650.0181
PHE 660.0140
THR 670.0100
ILE 680.0083
SER 690.0069
LYS 700.0040
THR 710.0400
SER 720.0520
THR 730.0406
THR 740.0101
VAL 750.0019
ASP 760.0065
LEU 770.0118
LYS 780.0123
ILE 790.0128
THR 800.0147
SER 810.0144
PRO 820.0118
THR 830.0108
THR 840.0129
GLU 850.0101
ASP 860.0075
THR 870.0119
ALA 880.0095
THR 890.0055
TYR 900.0036
PHE 910.0049
CYS 920.0011
CYS 920.0011
ALA 930.0036
ARG 940.0028
TYR 950.0060
TYR 960.0072
TYR 960.0072
ALA 970.0100
GLY 980.0105
SER 990.0089
ASP 1000.0092
ILE 1010.0104
ILE 1010.0104
TRP 1020.0088
GLY 1030.0073
PRO 1040.0099
GLY 1050.0021
THR 1060.0067
LEU 1070.0065
LEU 1070.0065
VAL 1080.0119
THR 1090.0128
VAL 1100.0055
SER 1110.0065
SER 1120.0191
ALA 1130.0148
SER 1140.0181
THR 1150.0119
LYS 1160.0063
GLY 1170.0076
PRO 1180.0084
SER 1190.0068
VAL 1200.0047
PHE 1210.0011
PRO 1220.0042
LEU 1230.0064
ALA 1240.0082
PRO 1250.0096
SER 1260.0078
GLY 1330.0070
THR 1340.0033
THR 1340.0032
ALA 1350.0018
ALA 1360.0045
LEU 1370.0042
GLY 1380.0041
CYS 1390.0019
CYS 1390.0018
LEU 1400.0031
VAL 1410.0059
LYS 1420.0062
ASP 1430.0050
TYR 1440.0052
PHE 1450.0033
PRO 1460.0035
GLU 1470.0049
GLU 1470.0049
PRO 1480.0063
VAL 1490.0064
THR 1500.0062
VAL 1510.0038
SER 1520.0027
TRP 1530.0018
ASN 1540.0066
SER 1550.0107
GLY 1560.0084
ALA 1570.0097
LEU 1580.0041
THR 1590.0053
SER 1600.0066
SER 1600.0066
GLY 1610.0075
VAL 1620.0068
HIS 1630.0040
THR 1640.0040
PHE 1650.0038
PRO 1660.0033
ALA 1670.0047
VAL 1680.0057
VAL 1680.0057
LEU 1690.0027
GLN 1700.0033
SER 1710.0090
SER 1720.0095
GLY 1730.0048
LEU 1740.0032
TYR 1750.0036
SER 1760.0053
SER 1760.0053
LEU 1770.0065
SER 1780.0039
SER 1780.0039
SER 1790.0035
VAL 1800.0036
VAL 1810.0030
THR 1820.0019
VAL 1830.0018
PRO 1840.0025
SER 1850.0046
SER 1850.0046
SER 1860.0071
SER 1870.0047
LEU 1880.0058
GLY 1890.0094
THR 1900.0037
GLN 1910.0033
GLN 1910.0033
THR 1920.0037
TYR 1930.0023
ILE 1940.0024
CYS 1950.0023
CYS 1950.0023
ASN 1960.0037
VAL 1970.0053
ASN 1980.0039
ASN 1980.0039
HIS 1990.0053
LYS 2000.0027
PRO 2010.0039
SER 2020.0051
ASN 2030.0056
THR 2040.0065
LYS 2050.0115
VAL 2060.0106
ASP 2070.0081
LYS 2080.0040
LYS 2090.0043
VAL 2100.0051
GLU 2110.0129
PRO 2120.0164
LYS 2130.0185
SER 2140.0845

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.