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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0850
ALA 10.0228
ASP 20.0077
VAL 30.0056
VAL 40.0149
MET 50.0126
THR 60.0130
GLN 70.0108
THR 80.0189
PRO 90.0227
SER 100.0267
SER 100.0267
SER 110.0180
VAL 120.0110
VAL 120.0107
SER 130.0063
SER 130.0064
ALA 140.0069
ALA 150.0112
VAL 160.0083
GLY 170.0193
GLY 180.0182
THR 190.0096
VAL 200.0030
THR 210.0081
THR 210.0079
ILE 220.0109
ASN 230.0113
CYS 240.0093
CYS 240.0093
GLN 250.0135
GLN 250.0132
ALA 260.0145
SER 270.0202
GLN 280.0094
SER 290.0103
ILE 300.0122
SER 310.0189
SER 310.0189
ALA 320.0138
TYR 330.0112
LEU 340.0034
ALA 350.0046
TRP 360.0056
TYR 370.0079
GLN 380.0070
GLN 390.0072
LYS 400.0098
PRO 410.0121
GLY 420.0121
GLN 430.0078
PRO 440.0082
PRO 450.0092
LYS 460.0051
LEU 470.0073
LEU 480.0075
ILE 490.0076
ILE 490.0076
TYR 500.0060
ASP 510.0039
ALA 520.0064
SER 530.0059
ASP 540.0050
LEU 550.0140
ALA 560.0199
SER 570.0227
SER 570.0227
GLY 580.0260
VAL 590.0139
SER 600.0185
SER 610.0184
ARG 620.0140
PHE 630.0084
LYS 640.0038
GLY 650.0038
SER 660.0033
GLY 670.0142
SER 680.0147
GLY 690.0106
THR 700.0040
GLN 710.0065
PHE 720.0032
THR 730.0038
LEU 740.0026
THR 750.0016
ILE 760.0073
SER 770.0130
SER 770.0131
ASP 780.0170
LEU 790.0091
GLU 800.0099
CYS 810.0095
ALA 820.0098
ASP 830.0093
ALA 840.0081
ALA 850.0032
THR 860.0023
TYR 870.0041
TYR 880.0059
CYS 890.0064
CYS 890.0063
GLN 900.0065
THR 910.0069
TYR 920.0091
TYR 930.0104
ALA 940.0086
ILE 950.0083
ILE 960.0145
THR 970.0162
TYR 980.0100
GLY 990.0065
ALA 1000.0028
ALA 1010.0034
PHE 1020.0063
GLY 1030.0067
GLY 1040.0012
GLY 1050.0014
THR 1060.0111
GLU 1070.0087
GLU 1070.0087
VAL 1080.0050
VAL 1090.0089
VAL 1100.0053
LYS 1110.0092
ARG 1120.0192
THR 1130.0185
VAL 1140.0126
ALA 1150.0064
ALA 1160.0099
PRO 1170.0086
SER 1180.0066
SER 1180.0066
VAL 1190.0061
PHE 1200.0073
ILE 1210.0044
PHE 1220.0032
PRO 1230.0057
PRO 1240.0172
SER 1250.0166
ASP 1260.0131
GLU 1270.0165
GLN 1280.0087
LEU 1290.0060
LYS 1300.0188
SER 1310.0081
GLY 1320.0155
THR 1330.0105
ALA 1340.0109
SER 1350.0102
VAL 1360.0020
VAL 1370.0022
CYS 1380.0040
LEU 1390.0036
LEU 1400.0032
ASN 1410.0028
ASN 1420.0049
ASN 1420.0049
PHE 1430.0039
TYR 1440.0052
PRO 1450.0089
ARG 1460.0075
GLU 1470.0139
ALA 1480.0087
LYS 1490.0101
VAL 1500.0019
GLN 1510.0123
TRP 1520.0127
LYS 1530.0133
VAL 1540.0080
ASP 1550.0067
ASN 1560.0070
ALA 1570.0092
LEU 1580.0167
GLN 1590.0207
SER 1600.0285
GLY 1610.0249
ASN 1620.0258
SER 1630.0175
GLN 1640.0092
GLU 1650.0069
SER 1660.0094
SER 1660.0094
VAL 1670.0087
VAL 1670.0086
THR 1680.0083
GLU 1690.0041
GLU 1690.0042
GLN 1700.0041
ASP 1710.0079
SER 1720.0156
LYS 1730.0209
ASP 1740.0131
CYS 1750.0072
THR 1760.0032
TYR 1770.0042
SER 1780.0055
LEU 1790.0056
SER 1800.0053
SER 1810.0064
THR 1820.0063
LEU 1830.0100
THR 1840.0097
LEU 1850.0095
SER 1860.0144
LYS 1870.0153
ALA 1880.0137
ASP 1890.0131
TYR 1900.0121
GLU 1910.0152
LYS 1920.0135
HIS 1930.0086
LYS 1940.0062
LYS 1940.0062
VAL 1950.0026
TYR 1960.0053
ALA 1970.0072
CYS 1980.0080
CYS 1980.0080
GLU 1990.0072
VAL 2000.0064
THR 2010.0107
HIS 2020.0227
GLN 2030.0200
GLY 2040.0149
LEU 2050.0122
SER 2060.0189
SER 2070.0252
PRO 2080.0098
VAL 2090.0104
THR 2100.0104
LYS 2110.0065
SER 2120.0057
PHE 2130.0042
ASN 2140.0051
ARG 2150.0071
GLY 2160.0094
GLU 2170.0155
SER 20.0041
VAL 30.0063
GLU 40.0089
GLU 50.0060
SER 60.0081
GLY 70.0069
GLY 80.0025
ARG 90.0040
LEU 100.0040
VAL 110.0040
THR 120.0057
PRO 130.0110
GLY 140.0151
THR 150.0112
PRO 160.0089
LEU 170.0065
THR 180.0071
LEU 190.0057
THR 200.0075
CYS 210.0070
THR 220.0081
VAL 230.0087
SER 240.0087
GLY 250.0118
PHE 260.0117
SER 270.0144
LEU 280.0145
SER 290.0194
SER 290.0193
ASP 300.0169
TYR 310.0143
ALA 320.0036
MET 330.0034
SER 340.0039
TRP 350.0056
VAL 360.0065
ARG 370.0064
GLN 380.0176
ALA 390.0190
PRO 400.0258
GLY 410.0354
LYS 420.0287
GLY 430.0262
LEU 440.0136
GLU 450.0120
TRP 460.0112
ILE 470.0053
GLY 480.0062
ILE 490.0073
ILE 500.0060
TYR 510.0043
ALA 520.0044
SER 530.0483
GLY 540.0280
SER 550.0078
THR 560.0116
THR 560.0116
TYR 570.0099
TYR 580.0088
ALA 590.0200
SER 600.0222
TRP 610.0218
ALA 620.0134
LYS 630.0068
GLY 640.0225
ARG 650.0154
PHE 660.0064
THR 670.0123
ILE 680.0090
SER 690.0081
LYS 700.0072
THR 710.0114
SER 720.0122
THR 730.0127
THR 740.0079
VAL 750.0078
ASP 760.0080
LEU 770.0078
LYS 780.0074
ILE 790.0055
THR 800.0038
SER 810.0073
PRO 820.0100
THR 830.0135
THR 840.0125
GLU 850.0110
ASP 860.0051
THR 870.0046
ALA 880.0047
THR 890.0038
TYR 900.0035
PHE 910.0039
CYS 920.0016
CYS 920.0016
ALA 930.0032
ARG 940.0043
TYR 950.0068
TYR 960.0080
TYR 960.0080
ALA 970.0071
GLY 980.0051
SER 990.0049
ASP 1000.0055
ILE 1010.0040
ILE 1010.0040
TRP 1020.0033
GLY 1030.0043
PRO 1040.0071
GLY 1050.0040
THR 1060.0036
LEU 1070.0024
LEU 1070.0023
VAL 1080.0027
THR 1090.0042
VAL 1100.0050
SER 1110.0051
SER 1120.0038
ALA 1130.0056
SER 1140.0076
THR 1150.0050
LYS 1160.0030
GLY 1170.0035
PRO 1180.0032
SER 1190.0057
VAL 1200.0055
PHE 1210.0056
PRO 1220.0058
LEU 1230.0069
ALA 1240.0078
PRO 1250.0082
SER 1260.0078
GLY 1330.0190
THR 1340.0128
THR 1340.0128
ALA 1350.0072
ALA 1360.0021
LEU 1370.0017
GLY 1380.0022
CYS 1390.0045
CYS 1390.0045
LEU 1400.0049
VAL 1410.0052
LYS 1420.0036
ASP 1430.0036
TYR 1440.0034
PHE 1450.0029
PRO 1460.0025
GLU 1470.0027
GLU 1470.0027
PRO 1480.0047
VAL 1490.0045
THR 1500.0040
VAL 1510.0057
SER 1520.0062
TRP 1530.0063
ASN 1540.0134
SER 1550.0211
GLY 1560.0131
ALA 1570.0089
LEU 1580.0103
THR 1590.0244
SER 1600.0180
SER 1600.0180
GLY 1610.0184
VAL 1620.0183
HIS 1630.0086
THR 1640.0087
PHE 1650.0083
PRO 1660.0072
ALA 1670.0058
VAL 1680.0065
VAL 1680.0064
LEU 1690.0071
GLN 1700.0117
SER 1710.0229
SER 1720.0181
GLY 1730.0163
LEU 1740.0102
TYR 1750.0033
SER 1760.0025
SER 1760.0025
LEU 1770.0026
SER 1780.0050
SER 1780.0050
SER 1790.0047
VAL 1800.0057
VAL 1810.0077
THR 1820.0042
VAL 1830.0033
PRO 1840.0139
SER 1850.0069
SER 1850.0069
SER 1860.0167
SER 1870.0079
LEU 1880.0055
GLY 1890.0071
THR 1900.0182
GLN 1910.0110
GLN 1910.0110
THR 1920.0117
TYR 1930.0050
ILE 1940.0062
CYS 1950.0068
CYS 1950.0068
ASN 1960.0064
VAL 1970.0071
ASN 1980.0070
ASN 1980.0069
HIS 1990.0053
LYS 2000.0050
PRO 2010.0047
SER 2020.0070
ASN 2030.0066
THR 2040.0088
LYS 2050.0151
VAL 2060.0139
ASP 2070.0111
LYS 2080.0056
LYS 2090.0021
VAL 2100.0034
GLU 2110.0125
PRO 2120.0164
LYS 2130.0218
SER 2140.0850

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.