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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0259
ALA 10.0126
ASP 20.0104
VAL 30.0103
VAL 40.0117
MET 50.0110
THR 60.0141
GLN 70.0118
THR 80.0133
PRO 90.0131
SER 100.0104
SER 100.0104
SER 110.0091
VAL 120.0099
VAL 120.0098
SER 130.0078
SER 130.0077
ALA 140.0077
ALA 150.0058
VAL 160.0057
GLY 170.0108
GLY 180.0115
THR 190.0137
VAL 200.0125
THR 210.0141
THR 210.0142
ILE 220.0127
ASN 230.0142
CYS 240.0132
CYS 240.0131
GLN 250.0157
GLN 250.0155
ALA 260.0136
SER 270.0154
GLN 280.0154
SER 290.0147
ILE 300.0113
SER 310.0137
SER 310.0137
ALA 320.0133
TYR 330.0093
LEU 340.0093
ALA 350.0079
TRP 360.0079
TYR 370.0057
GLN 380.0054
GLN 390.0036
LYS 400.0031
PRO 410.0018
GLY 420.0025
GLN 430.0040
PRO 440.0038
PRO 450.0039
LYS 460.0069
LEU 470.0078
LEU 480.0101
ILE 490.0115
ILE 490.0115
TYR 500.0108
ASP 510.0121
ALA 520.0136
SER 530.0159
ASP 540.0159
LEU 550.0151
ALA 560.0135
SER 570.0160
SER 570.0160
GLY 580.0162
VAL 590.0144
SER 600.0162
SER 610.0184
ARG 620.0159
PHE 630.0143
LYS 640.0164
GLY 650.0155
SER 660.0181
GLY 670.0184
SER 680.0174
GLY 690.0169
THR 700.0169
GLN 710.0177
PHE 720.0156
THR 730.0155
LEU 740.0134
THR 750.0150
ILE 760.0128
SER 770.0147
SER 770.0147
ASP 780.0138
LEU 790.0087
GLU 800.0072
CYS 810.0047
ALA 820.0061
ASP 830.0056
ALA 840.0023
ALA 850.0030
THR 860.0036
TYR 870.0057
TYR 880.0060
CYS 890.0071
CYS 890.0072
GLN 900.0053
THR 910.0058
TYR 920.0037
TYR 930.0056
ALA 940.0026
ILE 950.0034
ILE 960.0064
THR 970.0068
TYR 980.0074
GLY 990.0061
ALA 1000.0033
ALA 1010.0056
PHE 1020.0054
GLY 1030.0077
GLY 1040.0078
GLY 1050.0065
THR 1060.0075
GLU 1070.0054
GLU 1070.0054
VAL 1080.0055
VAL 1090.0032
VAL 1100.0022
LYS 1110.0019
ARG 1120.0083
THR 1130.0128
VAL 1140.0149
ALA 1150.0153
ALA 1160.0162
PRO 1170.0135
SER 1180.0132
SER 1180.0132
VAL 1190.0109
PHE 1200.0081
ILE 1210.0050
PHE 1220.0011
PRO 1230.0021
PRO 1240.0062
SER 1250.0085
ASP 1260.0116
GLU 1270.0142
GLN 1280.0129
LEU 1290.0140
LYS 1300.0181
SER 1310.0184
GLY 1320.0186
THR 1330.0150
ALA 1340.0109
SER 1350.0078
VAL 1360.0053
VAL 1370.0033
CYS 1380.0058
LEU 1390.0062
LEU 1400.0089
ASN 1410.0094
ASN 1420.0102
ASN 1420.0101
PHE 1430.0111
TYR 1440.0109
PRO 1450.0118
ARG 1460.0100
GLU 1470.0122
ALA 1480.0139
LYS 1490.0153
VAL 1500.0132
GLN 1510.0160
TRP 1520.0139
LYS 1530.0153
VAL 1540.0144
ASP 1550.0157
ASN 1560.0186
ALA 1570.0201
LEU 1580.0203
GLN 1590.0184
SER 1600.0195
GLY 1610.0195
ASN 1620.0159
SER 1630.0100
GLN 1640.0086
GLU 1650.0072
SER 1660.0041
SER 1660.0042
VAL 1670.0044
VAL 1670.0045
THR 1680.0034
GLU 1690.0026
GLU 1690.0026
GLN 1700.0037
ASP 1710.0055
SER 1720.0070
LYS 1730.0089
ASP 1740.0094
CYS 1750.0065
THR 1760.0079
TYR 1770.0071
SER 1780.0068
LEU 1790.0059
SER 1800.0045
SER 1810.0068
THR 1820.0064
LEU 1830.0094
THR 1840.0115
LEU 1850.0142
SER 1860.0169
LYS 1870.0159
ALA 1880.0187
ASP 1890.0177
TYR 1900.0133
GLU 1910.0135
LYS 1920.0160
HIS 1930.0134
LYS 1940.0099
LYS 1940.0100
VAL 1950.0104
TYR 1960.0092
ALA 1970.0111
CYS 1980.0116
CYS 1980.0117
GLU 1990.0152
VAL 2000.0152
THR 2010.0183
HIS 2020.0172
GLN 2030.0188
GLY 2040.0189
LEU 2050.0215
SER 2060.0259
SER 2070.0250
PRO 2080.0208
VAL 2090.0177
THR 2100.0153
LYS 2110.0112
SER 2120.0092
PHE 2130.0059
ASN 2140.0053
ARG 2150.0047
GLY 2160.0036
GLU 2170.0010
SER 20.0146
VAL 30.0126
GLU 40.0117
GLU 50.0092
SER 60.0105
GLY 70.0108
GLY 80.0058
ARG 90.0035
LEU 100.0025
VAL 110.0070
THR 120.0099
PRO 130.0141
GLY 140.0175
THR 150.0155
PRO 160.0167
LEU 170.0139
THR 180.0144
LEU 190.0118
THR 200.0137
CYS 210.0124
THR 220.0152
VAL 230.0161
SER 240.0188
GLY 250.0202
PHE 260.0184
SER 270.0188
LEU 280.0167
SER 290.0185
SER 290.0185
ASP 300.0160
TYR 310.0125
ALA 320.0102
MET 330.0091
SER 340.0066
TRP 350.0070
VAL 360.0041
ARG 370.0041
GLN 380.0035
ALA 390.0056
PRO 400.0062
GLY 410.0072
LYS 420.0065
GLY 430.0050
LEU 440.0038
GLU 450.0054
TRP 460.0050
ILE 470.0081
GLY 480.0087
ILE 490.0087
ILE 500.0120
TYR 510.0121
ALA 520.0150
SER 530.0174
GLY 540.0174
SER 550.0157
THR 560.0141
THR 560.0141
TYR 570.0120
TYR 580.0120
ALA 590.0113
SER 600.0152
TRP 610.0161
ALA 620.0147
LYS 630.0174
GLY 640.0208
ARG 650.0182
PHE 660.0160
THR 670.0175
ILE 680.0151
SER 690.0177
LYS 700.0184
THR 710.0215
SER 720.0224
THR 730.0203
THR 740.0174
VAL 750.0149
ASP 760.0152
LEU 770.0134
LYS 780.0157
ILE 790.0147
THR 800.0189
SER 810.0184
PRO 820.0143
THR 830.0143
THR 840.0123
GLU 850.0124
ASP 860.0099
THR 870.0067
ALA 880.0045
THR 890.0023
TYR 900.0043
PHE 910.0044
CYS 920.0070
CYS 920.0071
ALA 930.0062
ARG 940.0081
TYR 950.0064
TYR 960.0077
TYR 960.0076
ALA 970.0069
GLY 980.0048
SER 990.0049
ASP 1000.0082
ILE 1010.0094
ILE 1010.0094
TRP 1020.0073
GLY 1030.0082
PRO 1040.0063
GLY 1050.0045
THR 1060.0053
LEU 1070.0017
LEU 1070.0017
VAL 1080.0037
THR 1090.0043
VAL 1100.0082
SER 1110.0089
SER 1120.0090
ALA 1130.0121
SER 1140.0122
THR 1150.0112
LYS 1160.0143
GLY 1170.0138
PRO 1180.0122
SER 1190.0132
VAL 1200.0113
PHE 1210.0099
PRO 1220.0082
LEU 1230.0046
ALA 1240.0061
PRO 1250.0071
SER 1260.0063
GLY 1330.0176
THR 1340.0150
THR 1340.0150
ALA 1350.0114
ALA 1360.0085
LEU 1370.0071
GLY 1380.0062
CYS 1390.0069
CYS 1390.0069
LEU 1400.0059
VAL 1410.0078
LYS 1420.0094
ASP 1430.0113
TYR 1440.0110
PHE 1450.0100
PRO 1460.0075
GLU 1470.0055
GLU 1470.0056
PRO 1480.0057
VAL 1490.0072
THR 1500.0083
VAL 1510.0098
SER 1520.0124
TRP 1530.0135
ASN 1540.0169
SER 1550.0183
GLY 1560.0176
ALA 1570.0190
LEU 1580.0161
THR 1590.0151
SER 1600.0146
SER 1600.0146
GLY 1610.0120
VAL 1620.0099
HIS 1630.0060
THR 1640.0042
PHE 1650.0014
PRO 1660.0010
ALA 1670.0037
VAL 1680.0058
VAL 1680.0058
LEU 1690.0081
GLN 1700.0104
SER 1710.0136
SER 1720.0145
GLY 1730.0126
LEU 1740.0109
TYR 1750.0077
SER 1760.0066
SER 1760.0066
LEU 1770.0040
SER 1780.0029
SER 1780.0030
SER 1790.0049
VAL 1800.0059
VAL 1810.0094
THR 1820.0114
VAL 1830.0143
PRO 1840.0172
SER 1850.0150
SER 1850.0150
SER 1860.0180
SER 1870.0180
LEU 1880.0147
GLY 1890.0168
THR 1900.0201
GLN 1910.0193
GLN 1910.0193
THR 1920.0180
TYR 1930.0145
ILE 1940.0147
CYS 1950.0125
CYS 1950.0124
ASN 1960.0136
VAL 1970.0117
ASN 1980.0125
ASN 1980.0124
HIS 1990.0106
LYS 2000.0121
PRO 2010.0117
SER 2020.0145
ASN 2030.0162
THR 2040.0154
LYS 2050.0161
VAL 2060.0157
ASP 2070.0162
LYS 2080.0145
LYS 2090.0147
VAL 2100.0112
GLU 2110.0114
PRO 2120.0098
LYS 2130.0088
SER 2140.0111

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.