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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1160
ALA 10.0149
ASP 20.0129
VAL 30.0046
VAL 40.0062
MET 50.0064
THR 60.0076
GLN 70.0052
THR 80.0040
PRO 90.0031
SER 100.0077
SER 100.0077
SER 110.0071
VAL 120.0038
VAL 120.0038
SER 130.0063
SER 130.0064
ALA 140.0091
ALA 150.0126
VAL 160.0122
GLY 170.0129
GLY 180.0118
THR 190.0050
VAL 200.0027
THR 210.0027
THR 210.0028
ILE 220.0066
ASN 230.0069
CYS 240.0078
CYS 240.0079
GLN 250.0157
GLN 250.0154
ALA 260.0109
SER 270.0156
GLN 280.0136
SER 290.0102
ILE 300.0048
SER 310.0065
SER 310.0064
ALA 320.0067
TYR 330.0070
LEU 340.0021
ALA 350.0028
TRP 360.0036
TYR 370.0036
GLN 380.0055
GLN 390.0060
LYS 400.0055
PRO 410.0087
GLY 420.0091
GLN 430.0017
PRO 440.0024
PRO 450.0050
LYS 460.0034
LEU 470.0031
LEU 480.0042
ILE 490.0032
ILE 490.0032
TYR 500.0036
ASP 510.0036
ALA 520.0047
SER 530.0037
ASP 540.0030
LEU 550.0056
ALA 560.0051
SER 570.0058
SER 570.0058
GLY 580.0059
VAL 590.0054
SER 600.0060
SER 610.0040
ARG 620.0039
PHE 630.0039
LYS 640.0008
GLY 650.0022
SER 660.0045
GLY 670.0129
SER 680.0064
GLY 690.0067
THR 700.0132
GLN 710.0155
PHE 720.0145
THR 730.0035
LEU 740.0024
THR 750.0020
ILE 760.0027
SER 770.0047
SER 770.0047
ASP 780.0065
LEU 790.0040
GLU 800.0042
CYS 810.0045
ALA 820.0031
ASP 830.0035
ALA 840.0039
ALA 850.0081
THR 860.0080
TYR 870.0078
TYR 880.0037
CYS 890.0032
CYS 890.0032
GLN 900.0032
THR 910.0040
TYR 920.0053
TYR 930.0047
ALA 940.0129
ILE 950.0076
ILE 960.0107
THR 970.0046
TYR 980.0054
GLY 990.0085
ALA 1000.0076
ALA 1010.0070
PHE 1020.0052
GLY 1030.0031
GLY 1040.0013
GLY 1050.0044
THR 1060.0080
GLU 1070.0081
GLU 1070.0081
VAL 1080.0055
VAL 1090.0047
VAL 1100.0054
LYS 1110.0094
ARG 1120.0166
THR 1130.0194
VAL 1140.0142
ALA 1150.0066
ALA 1160.0070
PRO 1170.0066
SER 1180.0038
SER 1180.0038
VAL 1190.0053
PHE 1200.0096
ILE 1210.0037
PHE 1220.0069
PRO 1230.0067
PRO 1240.0101
SER 1250.0085
ASP 1260.0068
GLU 1270.0063
GLN 1280.0043
LEU 1290.0060
LYS 1300.0108
SER 1310.0163
GLY 1320.0186
THR 1330.0084
ALA 1340.0073
SER 1350.0057
VAL 1360.0031
VAL 1370.0033
CYS 1380.0026
LEU 1390.0025
LEU 1400.0005
ASN 1410.0021
ASN 1420.0038
ASN 1420.0038
PHE 1430.0045
TYR 1440.0062
PRO 1450.0088
ARG 1460.0077
GLU 1470.0068
ALA 1480.0082
LYS 1490.0080
VAL 1500.0052
GLN 1510.0036
TRP 1520.0033
LYS 1530.0038
VAL 1540.0042
ASP 1550.0057
ASN 1560.0144
ALA 1570.0108
LEU 1580.0091
GLN 1590.0085
SER 1600.0136
GLY 1610.0109
ASN 1620.0118
SER 1630.0102
GLN 1640.0094
GLU 1650.0076
SER 1660.0092
SER 1660.0092
VAL 1670.0083
VAL 1670.0082
THR 1680.0094
GLU 1690.0095
GLU 1690.0096
GLN 1700.0064
ASP 1710.0049
SER 1720.0075
LYS 1730.0092
ASP 1740.0048
CYS 1750.0040
THR 1760.0041
TYR 1770.0064
SER 1780.0045
LEU 1790.0045
SER 1800.0050
SER 1810.0048
THR 1820.0048
LEU 1830.0055
THR 1840.0012
LEU 1850.0015
SER 1860.0044
LYS 1870.0109
ALA 1880.0111
ASP 1890.0060
TYR 1900.0044
GLU 1910.0048
LYS 1920.0039
HIS 1930.0072
LYS 1940.0074
LYS 1940.0074
VAL 1950.0082
TYR 1960.0058
ALA 1970.0052
CYS 1980.0049
CYS 1980.0049
GLU 1990.0022
VAL 2000.0035
THR 2010.0046
HIS 2020.0069
GLN 2030.0049
GLY 2040.0071
LEU 2050.0128
SER 2060.0248
SER 2070.0221
PRO 2080.0058
VAL 2090.0031
THR 2100.0062
LYS 2110.0039
SER 2120.0060
PHE 2130.0064
ASN 2140.0087
ARG 2150.0074
GLY 2160.0061
GLU 2170.0157
SER 20.0093
VAL 30.0065
GLU 40.0085
GLU 50.0050
SER 60.0066
GLY 70.0069
GLY 80.0029
ARG 90.0009
LEU 100.0034
VAL 110.0073
THR 120.0104
PRO 130.0126
GLY 140.0113
THR 150.0125
PRO 160.0100
LEU 170.0023
THR 180.0022
LEU 190.0043
THR 200.0061
CYS 210.0028
THR 220.0034
VAL 230.0040
SER 240.0097
GLY 250.0142
PHE 260.0034
SER 270.0029
LEU 280.0032
SER 290.0055
SER 290.0055
ASP 300.0045
TYR 310.0058
ALA 320.0026
MET 330.0013
SER 340.0015
TRP 350.0026
VAL 360.0020
ARG 370.0015
GLN 380.0087
ALA 390.0150
PRO 400.0192
GLY 410.0226
LYS 420.0092
GLY 430.0101
LEU 440.0057
GLU 450.0061
TRP 460.0053
ILE 470.0041
GLY 480.0062
ILE 490.0069
ILE 500.0049
TYR 510.0048
ALA 520.0113
SER 530.0537
GLY 540.0331
SER 550.0122
THR 560.0140
THR 560.0140
TYR 570.0150
TYR 580.0151
ALA 590.0244
SER 600.0231
TRP 610.0139
ALA 620.0115
LYS 630.0289
GLY 640.0613
ARG 650.0312
PHE 660.0164
THR 670.0190
ILE 680.0064
SER 690.0056
LYS 700.0054
THR 710.0200
SER 720.0217
THR 730.0123
THR 740.0040
VAL 750.0039
ASP 760.0043
LEU 770.0033
LYS 780.0031
ILE 790.0020
THR 800.0079
SER 810.0056
PRO 820.0034
THR 830.0090
THR 840.0074
GLU 850.0026
ASP 860.0048
THR 870.0055
ALA 880.0050
THR 890.0009
TYR 900.0010
PHE 910.0008
CYS 920.0018
CYS 920.0018
ALA 930.0017
ARG 940.0026
TYR 950.0045
TYR 960.0064
TYR 960.0064
ALA 970.0044
GLY 980.0030
SER 990.0028
ASP 1000.0047
ILE 1010.0045
ILE 1010.0045
TRP 1020.0031
GLY 1030.0036
PRO 1040.0046
GLY 1050.0027
THR 1060.0037
LEU 1070.0007
LEU 1070.0006
VAL 1080.0019
THR 1090.0022
VAL 1100.0095
SER 1110.0109
SER 1120.0115
ALA 1130.0262
SER 1140.0252
THR 1150.0191
LYS 1160.0075
GLY 1170.0057
PRO 1180.0054
SER 1190.0071
VAL 1200.0059
PHE 1210.0031
PRO 1220.0027
LEU 1230.0069
ALA 1240.0088
PRO 1250.0139
SER 1260.0134
GLY 1330.0556
THR 1340.0339
THR 1340.0337
ALA 1350.0239
ALA 1360.0111
LEU 1370.0092
GLY 1380.0096
CYS 1390.0042
CYS 1390.0042
LEU 1400.0043
VAL 1410.0043
LYS 1420.0030
ASP 1430.0027
TYR 1440.0035
PHE 1450.0081
PRO 1460.0078
GLU 1470.0075
GLU 1470.0075
PRO 1480.0039
VAL 1490.0043
THR 1500.0046
VAL 1510.0011
SER 1520.0016
TRP 1530.0041
ASN 1540.0154
SER 1550.0170
GLY 1560.0157
ALA 1570.0247
LEU 1580.0113
THR 1590.0050
SER 1600.0189
SER 1600.0189
GLY 1610.0123
VAL 1620.0038
HIS 1630.0048
THR 1640.0052
PHE 1650.0063
PRO 1660.0103
ALA 1670.0105
VAL 1680.0129
VAL 1680.0128
LEU 1690.0106
GLN 1700.0102
SER 1710.0113
SER 1720.0185
GLY 1730.0108
LEU 1740.0057
TYR 1750.0037
SER 1760.0052
SER 1760.0052
LEU 1770.0074
SER 1780.0057
SER 1780.0057
SER 1790.0054
VAL 1800.0046
VAL 1810.0077
THR 1820.0090
VAL 1830.0067
PRO 1840.0262
SER 1850.0128
SER 1850.0128
SER 1860.0357
SER 1870.0107
LEU 1880.0072
GLY 1890.0103
THR 1900.0229
GLN 1910.0120
GLN 1910.0119
THR 1920.0075
TYR 1930.0086
ILE 1940.0071
CYS 1950.0073
CYS 1950.0073
ASN 1960.0081
VAL 1970.0082
ASN 1980.0087
ASN 1980.0088
HIS 1990.0099
LYS 2000.0117
PRO 2010.0122
SER 2020.0233
ASN 2030.0262
THR 2040.0240
LYS 2050.0233
VAL 2060.0169
ASP 2070.0177
LYS 2080.0102
LYS 2090.0081
VAL 2100.0045
GLU 2110.0155
PRO 2120.0256
LYS 2130.0279
SER 2140.1160

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.