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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 82  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0557
ALA 10.0314
ASP 20.0230
VAL 30.0125
VAL 40.0087
MET 50.0083
THR 60.0095
GLN 70.0112
THR 80.0138
PRO 90.0141
SER 100.0174
SER 100.0175
SER 110.0137
VAL 120.0105
VAL 120.0103
SER 130.0078
SER 130.0077
ALA 140.0072
ALA 150.0057
VAL 160.0032
GLY 170.0051
GLY 180.0059
THR 190.0060
VAL 200.0078
THR 210.0093
THR 210.0093
ILE 220.0086
ASN 230.0087
CYS 240.0084
CYS 240.0084
GLN 250.0086
GLN 250.0087
ALA 260.0083
SER 270.0076
GLN 280.0031
SER 290.0088
ILE 300.0119
SER 310.0220
SER 310.0220
ALA 320.0173
TYR 330.0163
LEU 340.0015
ALA 350.0029
TRP 360.0059
TYR 370.0098
GLN 380.0098
GLN 390.0098
LYS 400.0107
PRO 410.0137
GLY 420.0197
GLN 430.0150
PRO 440.0140
PRO 450.0150
LYS 460.0091
LEU 470.0082
LEU 480.0075
ILE 490.0069
ILE 490.0068
TYR 500.0050
ASP 510.0056
ALA 520.0049
SER 530.0054
ASP 540.0067
LEU 550.0082
ALA 560.0067
SER 570.0063
SER 570.0063
GLY 580.0163
VAL 590.0091
SER 600.0147
SER 610.0117
ARG 620.0073
PHE 630.0054
LYS 640.0034
GLY 650.0031
SER 660.0018
GLY 670.0120
SER 680.0191
GLY 690.0216
THR 700.0122
GLN 710.0073
PHE 720.0030
THR 730.0068
LEU 740.0057
THR 750.0055
ILE 760.0049
SER 770.0052
SER 770.0052
ASP 780.0056
LEU 790.0046
GLU 800.0041
CYS 810.0057
ALA 820.0019
ASP 830.0023
ALA 840.0019
ALA 850.0067
THR 860.0070
TYR 870.0087
TYR 880.0064
CYS 890.0056
CYS 890.0056
GLN 900.0057
THR 910.0046
TYR 920.0084
TYR 930.0089
ALA 940.0063
ILE 950.0050
ILE 960.0069
THR 970.0142
TYR 980.0143
GLY 990.0171
ALA 1000.0129
ALA 1010.0096
PHE 1020.0068
GLY 1030.0075
GLY 1040.0086
GLY 1050.0084
THR 1060.0074
GLU 1070.0065
GLU 1070.0065
VAL 1080.0063
VAL 1090.0046
VAL 1100.0033
LYS 1110.0029
ARG 1120.0225
THR 1130.0232
VAL 1140.0139
ALA 1150.0113
ALA 1160.0128
PRO 1170.0130
SER 1180.0036
SER 1180.0036
VAL 1190.0037
PHE 1200.0031
ILE 1210.0048
PHE 1220.0033
PRO 1230.0036
PRO 1240.0098
SER 1250.0112
ASP 1260.0085
GLU 1270.0087
GLN 1280.0081
LEU 1290.0039
LYS 1300.0042
SER 1310.0076
GLY 1320.0093
THR 1330.0061
ALA 1340.0064
SER 1350.0073
VAL 1360.0014
VAL 1370.0028
CYS 1380.0047
LEU 1390.0067
LEU 1400.0064
ASN 1410.0056
ASN 1420.0066
ASN 1420.0065
PHE 1430.0049
TYR 1440.0038
PRO 1450.0062
ARG 1460.0068
GLU 1470.0048
ALA 1480.0088
LYS 1490.0061
VAL 1500.0034
GLN 1510.0053
TRP 1520.0047
LYS 1530.0047
VAL 1540.0054
ASP 1550.0059
ASN 1560.0060
ALA 1570.0131
LEU 1580.0108
GLN 1590.0074
SER 1600.0110
GLY 1610.0092
ASN 1620.0061
SER 1630.0125
GLN 1640.0121
GLU 1650.0126
SER 1660.0160
SER 1660.0160
VAL 1670.0124
VAL 1670.0124
THR 1680.0095
GLU 1690.0098
GLU 1690.0097
GLN 1700.0090
ASP 1710.0076
SER 1720.0056
LYS 1730.0064
ASP 1740.0122
CYS 1750.0087
THR 1760.0041
TYR 1770.0051
SER 1780.0061
LEU 1790.0091
SER 1800.0113
SER 1810.0085
THR 1820.0062
LEU 1830.0053
THR 1840.0075
LEU 1850.0068
SER 1860.0068
LYS 1870.0030
ALA 1880.0013
ASP 1890.0068
TYR 1900.0061
GLU 1910.0069
LYS 1920.0118
HIS 1930.0072
LYS 1940.0055
LYS 1940.0055
VAL 1950.0074
TYR 1960.0055
ALA 1970.0043
CYS 1980.0039
CYS 1980.0038
GLU 1990.0087
VAL 2000.0077
THR 2010.0105
HIS 2020.0107
GLN 2030.0100
GLY 2040.0111
LEU 2050.0149
SER 2060.0201
SER 2070.0141
PRO 2080.0161
VAL 2090.0082
THR 2100.0066
LYS 2110.0038
SER 2120.0047
PHE 2130.0065
ASN 2140.0045
ARG 2150.0035
GLY 2160.0035
GLU 2170.0209
SER 20.0095
VAL 30.0072
GLU 40.0112
GLU 50.0078
SER 60.0068
GLY 70.0069
GLY 80.0185
ARG 90.0173
LEU 100.0153
VAL 110.0200
THR 120.0181
PRO 130.0111
GLY 140.0232
THR 150.0211
PRO 160.0091
LEU 170.0088
THR 180.0080
LEU 190.0097
THR 200.0022
CYS 210.0026
THR 220.0034
VAL 230.0061
SER 240.0159
GLY 250.0234
PHE 260.0105
SER 270.0050
LEU 280.0056
SER 290.0105
SER 290.0105
ASP 300.0065
TYR 310.0065
ALA 320.0039
MET 330.0048
SER 340.0069
TRP 350.0031
VAL 360.0035
ARG 370.0025
GLN 380.0092
ALA 390.0232
PRO 400.0355
GLY 410.0432
LYS 420.0221
GLY 430.0204
LEU 440.0042
GLU 450.0034
TRP 460.0073
ILE 470.0067
GLY 480.0087
ILE 490.0104
ILE 500.0101
TYR 510.0051
ALA 520.0084
SER 530.0451
GLY 540.0302
SER 550.0167
THR 560.0142
THR 560.0142
TYR 570.0128
TYR 580.0146
ALA 590.0220
SER 600.0178
TRP 610.0136
ALA 620.0096
LYS 630.0237
GLY 640.0557
ARG 650.0263
PHE 660.0149
THR 670.0265
ILE 680.0140
SER 690.0129
LYS 700.0125
THR 710.0144
SER 720.0135
THR 730.0078
THR 740.0063
VAL 750.0063
ASP 760.0077
LEU 770.0109
LYS 780.0100
ILE 790.0067
THR 800.0144
SER 810.0139
PRO 820.0091
THR 830.0084
THR 840.0152
GLU 850.0200
ASP 860.0111
THR 870.0111
ALA 880.0097
THR 890.0032
TYR 900.0021
PHE 910.0052
CYS 920.0051
CYS 920.0050
ALA 930.0043
ARG 940.0052
TYR 950.0072
TYR 960.0110
TYR 960.0110
ALA 970.0147
GLY 980.0094
SER 990.0069
ASP 1000.0065
ILE 1010.0044
ILE 1010.0044
TRP 1020.0061
GLY 1030.0085
PRO 1040.0109
GLY 1050.0088
THR 1060.0054
LEU 1070.0095
LEU 1070.0095
VAL 1080.0100
THR 1090.0099
VAL 1100.0131
SER 1110.0150
SER 1120.0158
ALA 1130.0176
SER 1140.0316
THR 1150.0197
LYS 1160.0130
GLY 1170.0141
PRO 1180.0148
SER 1190.0068
VAL 1200.0045
PHE 1210.0048
PRO 1220.0054
LEU 1230.0042
ALA 1240.0068
PRO 1250.0098
SER 1260.0101
GLY 1330.0415
THR 1340.0225
THR 1340.0225
ALA 1350.0120
ALA 1360.0059
LEU 1370.0064
GLY 1380.0068
CYS 1390.0016
CYS 1390.0016
LEU 1400.0018
VAL 1410.0042
LYS 1420.0084
ASP 1430.0065
TYR 1440.0102
PHE 1450.0103
PRO 1460.0097
GLU 1470.0093
GLU 1470.0094
PRO 1480.0147
VAL 1490.0116
THR 1500.0108
VAL 1510.0017
SER 1520.0023
TRP 1530.0040
ASN 1540.0090
SER 1550.0124
GLY 1560.0143
ALA 1570.0192
LEU 1580.0067
THR 1590.0117
SER 1600.0119
SER 1600.0120
GLY 1610.0076
VAL 1620.0036
HIS 1630.0019
THR 1640.0027
PHE 1650.0068
PRO 1660.0138
ALA 1670.0123
VAL 1680.0133
VAL 1680.0133
LEU 1690.0097
GLN 1700.0146
SER 1710.0285
SER 1720.0232
GLY 1730.0160
LEU 1740.0050
TYR 1750.0060
SER 1760.0056
SER 1760.0056
LEU 1770.0069
SER 1780.0033
SER 1780.0033
SER 1790.0026
VAL 1800.0042
VAL 1810.0027
THR 1820.0033
VAL 1830.0027
PRO 1840.0218
SER 1850.0078
SER 1850.0078
SER 1860.0252
SER 1870.0131
LEU 1880.0090
GLY 1890.0189
THR 1900.0171
GLN 1910.0105
GLN 1910.0104
THR 1920.0132
TYR 1930.0063
ILE 1940.0071
CYS 1950.0081
CYS 1950.0081
ASN 1960.0093
VAL 1970.0055
ASN 1980.0063
ASN 1980.0063
HIS 1990.0115
LYS 2000.0112
PRO 2010.0133
SER 2020.0159
ASN 2030.0083
THR 2040.0038
LYS 2050.0094
VAL 2060.0088
ASP 2070.0129
LYS 2080.0121
LYS 2090.0140
VAL 2100.0105
GLU 2110.0149
PRO 2120.0158
LYS 2130.0155
SER 2140.0418

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.