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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0851
ALA 10.0110
ASP 20.0069
VAL 30.0058
VAL 40.0053
MET 50.0046
THR 60.0044
GLN 70.0063
THR 80.0096
PRO 90.0106
SER 100.0132
SER 100.0133
SER 110.0093
VAL 120.0071
VAL 120.0070
SER 130.0062
SER 130.0062
ALA 140.0065
ALA 150.0060
VAL 160.0106
GLY 170.0164
GLY 180.0127
THR 190.0061
VAL 200.0053
THR 210.0052
THR 210.0052
ILE 220.0057
ASN 230.0055
CYS 240.0043
CYS 240.0044
GLN 250.0048
GLN 250.0048
ALA 260.0059
SER 270.0071
GLN 280.0052
SER 290.0058
ILE 300.0057
SER 310.0098
SER 310.0098
ALA 320.0078
TYR 330.0041
LEU 340.0024
ALA 350.0032
TRP 360.0036
TYR 370.0059
GLN 380.0060
GLN 390.0068
LYS 400.0105
PRO 410.0099
GLY 420.0133
GLN 430.0126
PRO 440.0096
PRO 450.0095
LYS 460.0053
LEU 470.0054
LEU 480.0055
ILE 490.0067
ILE 490.0067
TYR 500.0055
ASP 510.0036
ALA 520.0059
SER 530.0051
ASP 540.0049
LEU 550.0086
ALA 560.0151
SER 570.0171
SER 570.0172
GLY 580.0169
VAL 590.0145
SER 600.0268
SER 610.0218
ARG 620.0115
PHE 630.0088
LYS 640.0069
GLY 650.0058
SER 660.0066
GLY 670.0080
SER 680.0078
GLY 690.0062
THR 700.0034
GLN 710.0020
PHE 720.0023
THR 730.0018
LEU 740.0013
THR 750.0013
ILE 760.0022
SER 770.0033
SER 770.0033
ASP 780.0053
LEU 790.0075
GLU 800.0083
CYS 810.0064
ALA 820.0084
ASP 830.0057
ALA 840.0036
ALA 850.0048
THR 860.0045
TYR 870.0048
TYR 880.0046
CYS 890.0042
CYS 890.0042
GLN 900.0037
THR 910.0018
TYR 920.0019
TYR 930.0040
ALA 940.0045
ILE 950.0029
ILE 960.0056
THR 970.0062
TYR 980.0028
GLY 990.0023
ALA 1000.0028
ALA 1010.0033
PHE 1020.0040
GLY 1030.0047
GLY 1040.0036
GLY 1050.0036
THR 1060.0062
GLU 1070.0051
GLU 1070.0051
VAL 1080.0048
VAL 1090.0030
VAL 1100.0026
LYS 1110.0047
ARG 1120.0309
THR 1130.0341
VAL 1140.0214
ALA 1150.0124
ALA 1160.0140
PRO 1170.0112
SER 1180.0065
SER 1180.0065
VAL 1190.0044
PHE 1200.0068
ILE 1210.0032
PHE 1220.0037
PRO 1230.0044
PRO 1240.0070
SER 1250.0109
ASP 1260.0143
GLU 1270.0162
GLN 1280.0105
LEU 1290.0087
LYS 1300.0155
SER 1310.0344
GLY 1320.0432
THR 1330.0143
ALA 1340.0107
SER 1350.0065
VAL 1360.0038
VAL 1370.0033
CYS 1380.0041
LEU 1390.0064
LEU 1400.0051
ASN 1410.0050
ASN 1420.0103
ASN 1420.0103
PHE 1430.0074
TYR 1440.0080
PRO 1450.0134
ARG 1460.0077
GLU 1470.0101
ALA 1480.0116
LYS 1490.0120
VAL 1500.0118
GLN 1510.0027
TRP 1520.0032
LYS 1530.0055
VAL 1540.0099
ASP 1550.0093
ASN 1560.0153
ALA 1570.0124
LEU 1580.0105
GLN 1590.0113
SER 1600.0157
GLY 1610.0155
ASN 1620.0163
SER 1630.0144
GLN 1640.0135
GLU 1650.0160
SER 1660.0171
SER 1660.0169
VAL 1670.0123
VAL 1670.0121
THR 1680.0117
GLU 1690.0091
GLU 1690.0092
GLN 1700.0088
ASP 1710.0094
SER 1720.0222
LYS 1730.0186
ASP 1740.0149
CYS 1750.0157
THR 1760.0125
TYR 1770.0119
SER 1780.0082
LEU 1790.0100
SER 1800.0129
SER 1810.0093
THR 1820.0077
LEU 1830.0080
THR 1840.0089
LEU 1850.0093
SER 1860.0117
LYS 1870.0215
ALA 1880.0193
ASP 1890.0100
TYR 1900.0106
GLU 1910.0174
LYS 1920.0269
HIS 1930.0133
LYS 1940.0156
LYS 1940.0157
VAL 1950.0228
TYR 1960.0077
ALA 1970.0074
CYS 1980.0060
CYS 1980.0059
GLU 1990.0055
VAL 2000.0026
THR 2010.0084
HIS 2020.0250
GLN 2030.0247
GLY 2040.0157
LEU 2050.0250
SER 2060.0266
SER 2070.0338
PRO 2080.0113
VAL 2090.0112
THR 2100.0189
LYS 2110.0146
SER 2120.0162
PHE 2130.0181
ASN 2140.0231
ARG 2150.0138
GLY 2160.0238
GLU 2170.0851
SER 20.0045
VAL 30.0050
GLU 40.0073
GLU 50.0034
SER 60.0040
GLY 70.0052
GLY 80.0063
ARG 90.0057
LEU 100.0054
VAL 110.0029
THR 120.0062
PRO 130.0077
GLY 140.0078
THR 150.0074
PRO 160.0078
LEU 170.0053
THR 180.0057
LEU 190.0055
THR 200.0034
CYS 210.0023
THR 220.0029
VAL 230.0034
SER 240.0056
GLY 250.0071
PHE 260.0033
SER 270.0024
LEU 280.0035
SER 290.0082
SER 290.0082
ASP 300.0045
TYR 310.0050
ALA 320.0025
MET 330.0025
SER 340.0026
TRP 350.0024
VAL 360.0026
ARG 370.0027
GLN 380.0064
ALA 390.0077
PRO 400.0077
GLY 410.0106
LYS 420.0055
GLY 430.0050
LEU 440.0040
GLU 450.0030
TRP 460.0026
ILE 470.0022
GLY 480.0023
ILE 490.0029
ILE 500.0044
TYR 510.0046
ALA 520.0036
SER 530.0147
GLY 540.0045
SER 550.0079
THR 560.0052
THR 560.0052
TYR 570.0044
TYR 580.0052
ALA 590.0081
SER 600.0119
TRP 610.0092
ALA 620.0051
LYS 630.0108
GLY 640.0134
ARG 650.0061
PHE 660.0035
THR 670.0058
ILE 680.0042
SER 690.0022
LYS 700.0017
THR 710.0067
SER 720.0108
THR 730.0070
THR 740.0023
VAL 750.0024
ASP 760.0046
LEU 770.0065
LYS 780.0060
ILE 790.0047
THR 800.0040
SER 810.0030
PRO 820.0035
THR 830.0027
THR 840.0087
GLU 850.0118
ASP 860.0063
THR 870.0059
ALA 880.0068
THR 890.0031
TYR 900.0027
PHE 910.0029
CYS 920.0011
CYS 920.0011
ALA 930.0017
ARG 940.0032
TYR 950.0032
TYR 960.0038
TYR 960.0038
ALA 970.0062
GLY 980.0043
SER 990.0032
ASP 1000.0028
ILE 1010.0018
ILE 1010.0018
TRP 1020.0032
GLY 1030.0057
PRO 1040.0105
GLY 1050.0053
THR 1060.0023
LEU 1070.0035
LEU 1070.0035
VAL 1080.0042
THR 1090.0041
VAL 1100.0036
SER 1110.0074
SER 1120.0114
ALA 1130.0269
SER 1140.0370
THR 1150.0248
LYS 1160.0098
GLY 1170.0082
PRO 1180.0083
SER 1190.0053
VAL 1200.0052
PHE 1210.0063
PRO 1220.0050
LEU 1230.0050
ALA 1240.0051
PRO 1250.0079
SER 1260.0085
GLY 1330.0184
THR 1340.0138
THR 1340.0137
ALA 1350.0152
ALA 1360.0074
LEU 1370.0072
GLY 1380.0074
CYS 1390.0018
CYS 1390.0019
LEU 1400.0031
VAL 1410.0035
LYS 1420.0070
ASP 1430.0040
TYR 1440.0044
PHE 1450.0034
PRO 1460.0026
GLU 1470.0023
GLU 1470.0024
PRO 1480.0114
VAL 1490.0080
THR 1500.0093
VAL 1510.0059
SER 1520.0058
TRP 1530.0053
ASN 1540.0092
SER 1550.0090
GLY 1560.0096
ALA 1570.0186
LEU 1580.0099
THR 1590.0121
SER 1600.0123
SER 1600.0123
GLY 1610.0124
VAL 1620.0060
HIS 1630.0074
THR 1640.0091
PHE 1650.0120
PRO 1660.0130
ALA 1670.0134
VAL 1680.0206
VAL 1680.0205
LEU 1690.0214
GLN 1700.0235
SER 1710.0393
SER 1720.0274
GLY 1730.0274
LEU 1740.0106
TYR 1750.0047
SER 1760.0076
SER 1760.0076
LEU 1770.0092
SER 1780.0079
SER 1780.0079
SER 1790.0063
VAL 1800.0059
VAL 1810.0075
THR 1820.0078
VAL 1830.0071
PRO 1840.0140
SER 1850.0109
SER 1850.0109
SER 1860.0126
SER 1870.0029
LEU 1880.0037
GLY 1890.0055
THR 1900.0094
GLN 1910.0091
GLN 1910.0092
THR 1920.0091
TYR 1930.0073
ILE 1940.0065
CYS 1950.0066
CYS 1950.0066
ASN 1960.0111
VAL 1970.0100
ASN 1980.0096
ASN 1980.0096
HIS 1990.0122
LYS 2000.0165
PRO 2010.0148
SER 2020.0182
ASN 2030.0192
THR 2040.0058
LYS 2050.0131
VAL 2060.0130
ASP 2070.0142
LYS 2080.0063
LYS 2090.0029
VAL 2100.0028
GLU 2110.0092
PRO 2120.0112
LYS 2130.0120
SER 2140.0247

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.