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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0523
ALA 10.0068
ASP 20.0047
VAL 30.0016
VAL 40.0044
MET 50.0045
THR 60.0058
GLN 70.0047
THR 80.0039
PRO 90.0034
SER 100.0055
SER 100.0055
SER 110.0050
VAL 120.0045
VAL 120.0046
SER 130.0088
SER 130.0088
ALA 140.0089
ALA 150.0087
VAL 160.0116
GLY 170.0150
GLY 180.0125
THR 190.0098
VAL 200.0067
THR 210.0039
THR 210.0041
ILE 220.0023
ASN 230.0032
CYS 240.0046
CYS 240.0046
GLN 250.0079
GLN 250.0078
ALA 260.0049
SER 270.0081
GLN 280.0053
SER 290.0052
ILE 300.0047
SER 310.0075
SER 310.0074
ALA 320.0084
TYR 330.0075
LEU 340.0021
ALA 350.0029
TRP 360.0037
TYR 370.0046
GLN 380.0061
GLN 390.0064
LYS 400.0103
PRO 410.0105
GLY 420.0106
GLN 430.0145
PRO 440.0092
PRO 450.0063
LYS 460.0067
LEU 470.0040
LEU 480.0045
ILE 490.0028
ILE 490.0027
TYR 500.0026
ASP 510.0042
ALA 520.0033
SER 530.0032
ASP 540.0043
LEU 550.0086
ALA 560.0050
SER 570.0097
SER 570.0098
GLY 580.0050
VAL 590.0087
SER 600.0160
SER 610.0092
ARG 620.0072
PHE 630.0073
LYS 640.0045
GLY 650.0031
SER 660.0031
GLY 670.0067
SER 680.0052
GLY 690.0049
THR 700.0052
GLN 710.0063
PHE 720.0069
THR 730.0044
LEU 740.0027
THR 750.0022
ILE 760.0041
SER 770.0072
SER 770.0072
ASP 780.0102
LEU 790.0074
GLU 800.0069
CYS 810.0058
ALA 820.0017
ASP 830.0017
ALA 840.0038
ALA 850.0050
THR 860.0046
TYR 870.0047
TYR 880.0027
CYS 890.0028
CYS 890.0028
GLN 900.0020
THR 910.0034
TYR 920.0042
TYR 930.0036
ALA 940.0052
ILE 950.0027
ILE 960.0060
THR 970.0047
TYR 980.0032
GLY 990.0032
ALA 1000.0028
ALA 1010.0028
PHE 1020.0018
GLY 1030.0036
GLY 1040.0036
GLY 1050.0040
THR 1060.0048
GLU 1070.0057
GLU 1070.0057
VAL 1080.0054
VAL 1090.0072
VAL 1100.0050
LYS 1110.0059
ARG 1120.0210
THR 1130.0322
VAL 1140.0216
ALA 1150.0098
ALA 1160.0088
PRO 1170.0110
SER 1180.0075
SER 1180.0074
VAL 1190.0061
PHE 1200.0099
ILE 1210.0106
PHE 1220.0078
PRO 1230.0057
PRO 1240.0173
SER 1250.0214
ASP 1260.0183
GLU 1270.0217
GLN 1280.0200
LEU 1290.0146
LYS 1300.0112
SER 1310.0384
GLY 1320.0478
THR 1330.0146
ALA 1340.0118
SER 1350.0135
VAL 1360.0038
VAL 1370.0046
CYS 1380.0065
LEU 1390.0069
LEU 1400.0046
ASN 1410.0053
ASN 1420.0088
ASN 1420.0088
PHE 1430.0071
TYR 1440.0065
PRO 1450.0068
ARG 1460.0072
GLU 1470.0054
ALA 1480.0117
LYS 1490.0106
VAL 1500.0062
GLN 1510.0092
TRP 1520.0120
LYS 1530.0164
VAL 1540.0179
ASP 1550.0206
ASN 1560.0343
ALA 1570.0262
LEU 1580.0196
GLN 1590.0157
SER 1600.0106
GLY 1610.0107
ASN 1620.0143
SER 1630.0060
GLN 1640.0043
GLU 1650.0045
SER 1660.0069
SER 1660.0069
VAL 1670.0044
VAL 1670.0043
THR 1680.0037
GLU 1690.0069
GLU 1690.0069
GLN 1700.0072
ASP 1710.0066
SER 1720.0155
LYS 1730.0138
ASP 1740.0135
CYS 1750.0140
THR 1760.0119
TYR 1770.0116
SER 1780.0039
LEU 1790.0041
SER 1800.0056
SER 1810.0045
THR 1820.0043
LEU 1830.0065
THR 1840.0146
LEU 1850.0125
SER 1860.0106
LYS 1870.0114
ALA 1880.0198
ASP 1890.0165
TYR 1900.0140
GLU 1910.0198
LYS 1920.0275
HIS 1930.0196
LYS 1940.0143
LYS 1940.0143
VAL 1950.0081
TYR 1960.0090
ALA 1970.0082
CYS 1980.0078
CYS 1980.0078
GLU 1990.0030
VAL 2000.0057
THR 2010.0110
HIS 2020.0176
GLN 2030.0129
GLY 2040.0036
LEU 2050.0090
SER 2060.0082
SER 2070.0136
PRO 2080.0067
VAL 2090.0042
THR 2100.0032
LYS 2110.0067
SER 2120.0046
PHE 2130.0039
ASN 2140.0128
ARG 2150.0096
GLY 2160.0143
GLU 2170.0523
SER 20.0064
VAL 30.0067
GLU 40.0078
GLU 50.0057
SER 60.0049
GLY 70.0038
GLY 80.0016
ARG 90.0021
LEU 100.0031
VAL 110.0044
THR 120.0063
PRO 130.0110
GLY 140.0112
THR 150.0096
PRO 160.0086
LEU 170.0009
THR 180.0018
LEU 190.0026
THR 200.0023
CYS 210.0030
THR 220.0025
VAL 230.0040
SER 240.0086
GLY 250.0126
PHE 260.0062
SER 270.0037
LEU 280.0038
SER 290.0027
SER 290.0027
ASP 300.0026
TYR 310.0020
ALA 320.0017
MET 330.0011
SER 340.0013
TRP 350.0037
VAL 360.0028
ARG 370.0031
GLN 380.0044
ALA 390.0080
PRO 400.0094
GLY 410.0127
LYS 420.0055
GLY 430.0027
LEU 440.0018
GLU 450.0026
TRP 460.0017
ILE 470.0029
GLY 480.0022
ILE 490.0035
ILE 500.0043
TYR 510.0050
ALA 520.0062
SER 530.0315
GLY 540.0184
SER 550.0057
THR 560.0072
THR 560.0072
TYR 570.0066
TYR 580.0061
ALA 590.0077
SER 600.0111
TRP 610.0074
ALA 620.0056
LYS 630.0103
GLY 640.0226
ARG 650.0116
PHE 660.0083
THR 670.0083
ILE 680.0044
SER 690.0049
LYS 700.0047
THR 710.0142
SER 720.0149
THR 730.0100
THR 740.0041
VAL 750.0025
ASP 760.0020
LEU 770.0033
LYS 780.0024
ILE 790.0017
THR 800.0042
SER 810.0053
PRO 820.0044
THR 830.0101
THR 840.0086
GLU 850.0044
ASP 860.0041
THR 870.0038
ALA 880.0047
THR 890.0011
TYR 900.0031
PHE 910.0038
CYS 920.0048
CYS 920.0048
ALA 930.0039
ARG 940.0036
TYR 950.0056
TYR 960.0071
TYR 960.0071
ALA 970.0049
GLY 980.0019
SER 990.0032
ASP 1000.0032
ILE 1010.0043
ILE 1010.0043
TRP 1020.0055
GLY 1030.0078
PRO 1040.0096
GLY 1050.0053
THR 1060.0042
LEU 1070.0017
LEU 1070.0016
VAL 1080.0020
THR 1090.0029
VAL 1100.0066
SER 1110.0077
SER 1120.0073
ALA 1130.0206
SER 1140.0147
THR 1150.0057
LYS 1160.0051
GLY 1170.0029
PRO 1180.0038
SER 1190.0127
VAL 1200.0124
PHE 1210.0152
PRO 1220.0065
LEU 1230.0056
ALA 1240.0147
PRO 1250.0232
SER 1260.0277
GLY 1330.0172
THR 1340.0118
THR 1340.0118
ALA 1350.0103
ALA 1360.0064
LEU 1370.0054
GLY 1380.0049
CYS 1390.0055
CYS 1390.0056
LEU 1400.0046
VAL 1410.0039
LYS 1420.0038
ASP 1430.0032
TYR 1440.0033
PHE 1450.0028
PRO 1460.0039
GLU 1470.0073
GLU 1470.0073
PRO 1480.0074
VAL 1490.0026
THR 1500.0043
VAL 1510.0089
SER 1520.0079
TRP 1530.0066
ASN 1540.0116
SER 1550.0180
GLY 1560.0137
ALA 1570.0174
LEU 1580.0068
THR 1590.0048
SER 1600.0077
SER 1600.0077
GLY 1610.0119
VAL 1620.0105
HIS 1630.0077
THR 1640.0085
PHE 1650.0080
PRO 1660.0100
ALA 1670.0091
VAL 1680.0083
VAL 1680.0083
LEU 1690.0099
GLN 1700.0173
SER 1710.0258
SER 1720.0261
GLY 1730.0203
LEU 1740.0060
TYR 1750.0057
SER 1760.0055
SER 1760.0055
LEU 1770.0054
SER 1780.0070
SER 1780.0070
SER 1790.0074
VAL 1800.0075
VAL 1810.0047
THR 1820.0051
VAL 1830.0063
PRO 1840.0099
SER 1850.0129
SER 1850.0129
SER 1860.0161
SER 1870.0107
LEU 1880.0077
GLY 1890.0141
THR 1900.0072
GLN 1910.0072
GLN 1910.0073
THR 1920.0057
TYR 1930.0057
ILE 1940.0069
CYS 1950.0089
CYS 1950.0089
ASN 1960.0103
VAL 1970.0065
ASN 1980.0060
ASN 1980.0060
HIS 1990.0054
LYS 2000.0114
PRO 2010.0139
SER 2020.0215
ASN 2030.0233
THR 2040.0150
LYS 2050.0152
VAL 2060.0021
ASP 2070.0162
LYS 2080.0235
LYS 2090.0250
VAL 2100.0182
GLU 2110.0391
PRO 2120.0420
LYS 2130.0273
SER 2140.0483

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.