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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0630
ALA 10.0291
ASP 20.0132
VAL 30.0110
VAL 40.0206
MET 50.0156
THR 60.0187
GLN 70.0091
THR 80.0074
PRO 90.0076
SER 100.0107
SER 100.0107
SER 110.0098
VAL 120.0080
VAL 120.0080
SER 130.0073
SER 130.0073
ALA 140.0101
ALA 150.0121
VAL 160.0160
GLY 170.0217
GLY 180.0186
THR 190.0120
VAL 200.0096
THR 210.0064
THR 210.0065
ILE 220.0038
ASN 230.0059
CYS 240.0089
CYS 240.0089
GLN 250.0151
GLN 250.0149
ALA 260.0135
SER 270.0207
GLN 280.0159
SER 290.0095
ILE 300.0067
SER 310.0140
SER 310.0140
ALA 320.0126
TYR 330.0086
LEU 340.0039
ALA 350.0035
TRP 360.0036
TYR 370.0061
GLN 380.0090
GLN 390.0115
LYS 400.0170
PRO 410.0192
GLY 420.0260
GLN 430.0288
PRO 440.0206
PRO 450.0115
LYS 460.0149
LEU 470.0100
LEU 480.0077
ILE 490.0039
ILE 490.0039
TYR 500.0058
ASP 510.0070
ALA 520.0065
SER 530.0050
ASP 540.0091
LEU 550.0151
ALA 560.0121
SER 570.0168
SER 570.0168
GLY 580.0157
VAL 590.0191
SER 600.0301
SER 610.0162
ARG 620.0145
PHE 630.0129
LYS 640.0064
GLY 650.0040
SER 660.0056
GLY 670.0173
SER 680.0149
GLY 690.0138
THR 700.0089
GLN 710.0097
PHE 720.0130
THR 730.0054
LEU 740.0030
THR 750.0041
ILE 760.0088
SER 770.0107
SER 770.0106
ASP 780.0127
LEU 790.0087
GLU 800.0077
CYS 810.0050
ALA 820.0035
ASP 830.0043
ALA 840.0077
ALA 850.0063
THR 860.0046
TYR 870.0044
TYR 880.0042
CYS 890.0052
CYS 890.0052
GLN 900.0028
THR 910.0051
TYR 920.0046
TYR 930.0036
ALA 940.0119
ILE 950.0054
ILE 960.0133
THR 970.0138
TYR 980.0065
GLY 990.0026
ALA 1000.0022
ALA 1010.0006
PHE 1020.0031
GLY 1030.0093
GLY 1040.0071
GLY 1050.0076
THR 1060.0064
GLU 1070.0066
GLU 1070.0066
VAL 1080.0050
VAL 1090.0042
VAL 1100.0055
LYS 1110.0054
ARG 1120.0106
THR 1130.0110
VAL 1140.0122
ALA 1150.0079
ALA 1160.0062
PRO 1170.0050
SER 1180.0028
SER 1180.0028
VAL 1190.0029
PHE 1200.0029
ILE 1210.0072
PHE 1220.0061
PRO 1230.0052
PRO 1240.0066
SER 1250.0079
ASP 1260.0116
GLU 1270.0120
GLN 1280.0094
LEU 1290.0090
LYS 1300.0116
SER 1310.0124
GLY 1320.0086
THR 1330.0090
ALA 1340.0080
SER 1350.0069
VAL 1360.0025
VAL 1370.0046
CYS 1380.0070
LEU 1390.0079
LEU 1400.0060
ASN 1410.0052
ASN 1420.0050
ASN 1420.0050
PHE 1430.0058
TYR 1440.0074
PRO 1450.0077
ARG 1460.0084
GLU 1470.0067
ALA 1480.0094
LYS 1490.0170
VAL 1500.0120
GLN 1510.0057
TRP 1520.0070
LYS 1530.0089
VAL 1540.0128
ASP 1550.0166
ASN 1560.0155
ALA 1570.0122
LEU 1580.0055
GLN 1590.0047
SER 1600.0225
GLY 1610.0239
ASN 1620.0209
SER 1630.0089
GLN 1640.0069
GLU 1650.0114
SER 1660.0151
SER 1660.0151
VAL 1670.0120
VAL 1670.0120
THR 1680.0084
GLU 1690.0187
GLU 1690.0187
GLN 1700.0149
ASP 1710.0125
SER 1720.0196
LYS 1730.0138
ASP 1740.0053
CYS 1750.0077
THR 1760.0067
TYR 1770.0086
SER 1780.0055
LEU 1790.0087
SER 1800.0114
SER 1810.0076
THR 1820.0045
LEU 1830.0046
THR 1840.0121
LEU 1850.0100
SER 1860.0087
LYS 1870.0029
ALA 1880.0039
ASP 1890.0043
TYR 1900.0040
GLU 1910.0054
LYS 1920.0047
HIS 1930.0147
LYS 1940.0131
LYS 1940.0131
VAL 1950.0165
TYR 1960.0105
ALA 1970.0093
CYS 1980.0087
CYS 1980.0087
GLU 1990.0068
VAL 2000.0094
THR 2010.0159
HIS 2020.0044
GLN 2030.0035
GLY 2040.0071
LEU 2050.0196
SER 2060.0265
SER 2070.0210
PRO 2080.0189
VAL 2090.0121
THR 2100.0104
LYS 2110.0072
SER 2120.0083
PHE 2130.0103
ASN 2140.0103
ARG 2150.0095
GLY 2160.0042
GLU 2170.0318
SER 20.0085
VAL 30.0077
GLU 40.0107
GLU 50.0076
SER 60.0094
GLY 70.0169
GLY 80.0098
ARG 90.0102
LEU 100.0066
VAL 110.0031
THR 120.0082
PRO 130.0133
GLY 140.0140
THR 150.0124
PRO 160.0189
LEU 170.0145
THR 180.0152
LEU 190.0115
THR 200.0128
CYS 210.0073
THR 220.0054
VAL 230.0058
SER 240.0140
GLY 250.0218
PHE 260.0118
SER 270.0073
LEU 280.0036
SER 290.0102
SER 290.0102
ASP 300.0083
TYR 310.0075
ALA 320.0045
MET 330.0042
SER 340.0064
TRP 350.0097
VAL 360.0076
ARG 370.0045
GLN 380.0073
ALA 390.0276
PRO 400.0480
GLY 410.0630
LYS 420.0254
GLY 430.0318
LEU 440.0052
GLU 450.0047
TRP 460.0067
ILE 470.0085
GLY 480.0056
ILE 490.0054
ILE 500.0082
TYR 510.0117
ALA 520.0152
SER 530.0284
GLY 540.0170
SER 550.0118
THR 560.0049
THR 560.0049
TYR 570.0034
TYR 580.0065
ALA 590.0136
SER 600.0187
TRP 610.0162
ALA 620.0128
LYS 630.0209
GLY 640.0284
ARG 650.0107
PHE 660.0044
THR 670.0055
ILE 680.0067
SER 690.0077
LYS 700.0103
THR 710.0157
SER 720.0126
THR 730.0034
THR 740.0066
VAL 750.0088
ASP 760.0112
LEU 770.0075
LYS 780.0103
ILE 790.0072
THR 800.0098
SER 810.0084
PRO 820.0063
THR 830.0118
THR 840.0061
GLU 850.0173
ASP 860.0120
THR 870.0130
ALA 880.0106
THR 890.0028
TYR 900.0073
PHE 910.0126
CYS 920.0103
CYS 920.0102
ALA 930.0093
ARG 940.0072
TYR 950.0056
TYR 960.0074
TYR 960.0074
ALA 970.0073
GLY 980.0050
SER 990.0071
ASP 1000.0070
ILE 1010.0084
ILE 1010.0084
TRP 1020.0122
GLY 1030.0153
PRO 1040.0161
GLY 1050.0100
THR 1060.0051
LEU 1070.0024
LEU 1070.0024
VAL 1080.0042
THR 1090.0065
VAL 1100.0042
SER 1110.0118
SER 1120.0215
ALA 1130.0164
SER 1140.0119
THR 1150.0053
LYS 1160.0050
GLY 1170.0069
PRO 1180.0078
SER 1190.0087
VAL 1200.0063
PHE 1210.0051
PRO 1220.0034
LEU 1230.0044
ALA 1240.0053
PRO 1250.0073
SER 1260.0082
GLY 1330.0399
THR 1340.0208
THR 1340.0208
ALA 1350.0097
ALA 1360.0039
LEU 1370.0036
GLY 1380.0034
CYS 1390.0033
CYS 1390.0033
LEU 1400.0044
VAL 1410.0061
LYS 1420.0067
ASP 1430.0050
TYR 1440.0055
PHE 1450.0050
PRO 1460.0048
GLU 1470.0043
GLU 1470.0043
PRO 1480.0047
VAL 1490.0048
THR 1500.0065
VAL 1510.0026
SER 1520.0047
TRP 1530.0053
ASN 1540.0091
SER 1550.0128
GLY 1560.0124
ALA 1570.0155
LEU 1580.0087
THR 1590.0187
SER 1600.0153
SER 1600.0153
GLY 1610.0143
VAL 1620.0123
HIS 1630.0050
THR 1640.0030
PHE 1650.0066
PRO 1660.0114
ALA 1670.0118
VAL 1680.0160
VAL 1680.0160
LEU 1690.0120
GLN 1700.0042
SER 1710.0052
SER 1720.0094
GLY 1730.0103
LEU 1740.0053
TYR 1750.0073
SER 1760.0086
SER 1760.0086
LEU 1770.0101
SER 1780.0065
SER 1780.0065
SER 1790.0038
VAL 1800.0060
VAL 1810.0098
THR 1820.0082
VAL 1830.0080
PRO 1840.0203
SER 1850.0081
SER 1850.0081
SER 1860.0217
SER 1870.0143
LEU 1880.0098
GLY 1890.0129
THR 1900.0216
GLN 1910.0183
GLN 1910.0183
THR 1920.0181
TYR 1930.0076
ILE 1940.0072
CYS 1950.0073
CYS 1950.0073
ASN 1960.0037
VAL 1970.0043
ASN 1980.0045
ASN 1980.0046
HIS 1990.0048
LYS 2000.0045
PRO 2010.0029
SER 2020.0038
ASN 2030.0041
THR 2040.0046
LYS 2050.0019
VAL 2060.0041
ASP 2070.0057
LYS 2080.0099
LYS 2090.0105
VAL 2100.0073
GLU 2110.0098
PRO 2120.0097
LYS 2130.0067
SER 2140.0197

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.