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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0537
ALA 10.0127
ASP 20.0110
VAL 30.0054
VAL 40.0073
MET 50.0070
THR 60.0059
GLN 70.0085
THR 80.0077
PRO 90.0071
SER 100.0101
SER 100.0101
SER 110.0091
VAL 120.0071
VAL 120.0071
SER 130.0052
SER 130.0053
ALA 140.0080
ALA 150.0119
VAL 160.0107
GLY 170.0119
GLY 180.0088
THR 190.0055
VAL 200.0065
THR 210.0073
THR 210.0073
ILE 220.0066
ASN 230.0071
CYS 240.0077
CYS 240.0077
GLN 250.0064
GLN 250.0065
ALA 260.0029
SER 270.0041
GLN 280.0060
SER 290.0086
ILE 300.0072
SER 310.0100
SER 310.0100
ALA 320.0105
TYR 330.0081
LEU 340.0043
ALA 350.0036
TRP 360.0034
TYR 370.0069
GLN 380.0080
GLN 390.0074
LYS 400.0141
PRO 410.0109
GLY 420.0135
GLN 430.0216
PRO 440.0140
PRO 450.0154
LYS 460.0079
LEU 470.0062
LEU 480.0065
ILE 490.0067
ILE 490.0067
TYR 500.0047
ASP 510.0030
ALA 520.0068
SER 530.0058
ASP 540.0060
LEU 550.0116
ALA 560.0050
SER 570.0098
SER 570.0098
GLY 580.0113
VAL 590.0146
SER 600.0240
SER 610.0149
ARG 620.0125
PHE 630.0122
LYS 640.0093
GLY 650.0069
SER 660.0034
GLY 670.0122
SER 680.0115
GLY 690.0112
THR 700.0080
GLN 710.0102
PHE 720.0108
THR 730.0049
LEU 740.0051
THR 750.0046
ILE 760.0053
SER 770.0038
SER 770.0038
ASP 780.0042
LEU 790.0079
GLU 800.0072
CYS 810.0049
ALA 820.0056
ASP 830.0056
ALA 840.0065
ALA 850.0080
THR 860.0070
TYR 870.0066
TYR 880.0077
CYS 890.0079
CYS 890.0078
GLN 900.0084
THR 910.0084
TYR 920.0049
TYR 930.0040
ALA 940.0089
ILE 950.0060
ILE 960.0119
THR 970.0041
TYR 980.0047
GLY 990.0089
ALA 1000.0124
ALA 1010.0122
PHE 1020.0115
GLY 1030.0112
GLY 1040.0107
GLY 1050.0102
THR 1060.0076
GLU 1070.0082
GLU 1070.0082
VAL 1080.0078
VAL 1090.0038
VAL 1100.0051
LYS 1110.0058
ARG 1120.0223
THR 1130.0275
VAL 1140.0196
ALA 1150.0096
ALA 1160.0088
PRO 1170.0090
SER 1180.0020
SER 1180.0020
VAL 1190.0008
PHE 1200.0005
ILE 1210.0042
PHE 1220.0034
PRO 1230.0038
PRO 1240.0059
SER 1250.0043
ASP 1260.0055
GLU 1270.0058
GLN 1280.0053
LEU 1290.0053
LYS 1300.0046
SER 1310.0118
GLY 1320.0133
THR 1330.0063
ALA 1340.0052
SER 1350.0058
VAL 1360.0042
VAL 1370.0038
CYS 1380.0041
LEU 1390.0023
LEU 1400.0017
ASN 1410.0023
ASN 1420.0045
ASN 1420.0045
PHE 1430.0055
TYR 1440.0076
PRO 1450.0079
ARG 1460.0065
GLU 1470.0049
ALA 1480.0131
LYS 1490.0174
VAL 1500.0098
GLN 1510.0075
TRP 1520.0070
LYS 1530.0102
VAL 1540.0060
ASP 1550.0106
ASN 1560.0102
ALA 1570.0068
LEU 1580.0095
GLN 1590.0091
SER 1600.0082
GLY 1610.0099
ASN 1620.0053
SER 1630.0053
GLN 1640.0059
GLU 1650.0063
SER 1660.0052
SER 1660.0052
VAL 1670.0044
VAL 1670.0045
THR 1680.0049
GLU 1690.0082
GLU 1690.0082
GLN 1700.0072
ASP 1710.0056
SER 1720.0069
LYS 1730.0112
ASP 1740.0082
CYS 1750.0049
THR 1760.0047
TYR 1770.0056
SER 1780.0031
LEU 1790.0030
SER 1800.0041
SER 1810.0050
THR 1820.0045
LEU 1830.0044
THR 1840.0087
LEU 1850.0066
SER 1860.0071
LYS 1870.0051
ALA 1880.0106
ASP 1890.0057
TYR 1900.0046
GLU 1910.0068
LYS 1920.0084
HIS 1930.0101
LYS 1940.0080
LYS 1940.0081
VAL 1950.0072
TYR 1960.0061
ALA 1970.0056
CYS 1980.0056
CYS 1980.0056
GLU 1990.0039
VAL 2000.0059
THR 2010.0127
HIS 2020.0139
GLN 2030.0053
GLY 2040.0102
LEU 2050.0092
SER 2060.0178
SER 2070.0188
PRO 2080.0079
VAL 2090.0080
THR 2100.0079
LYS 2110.0046
SER 2120.0045
PHE 2130.0058
ASN 2140.0045
ARG 2150.0064
GLY 2160.0060
GLU 2170.0044
SER 20.0231
VAL 30.0142
GLU 40.0193
GLU 50.0152
SER 60.0239
GLY 70.0269
GLY 80.0146
ARG 90.0119
LEU 100.0093
VAL 110.0080
THR 120.0087
PRO 130.0069
GLY 140.0114
THR 150.0103
PRO 160.0080
LEU 170.0079
THR 180.0112
LEU 190.0120
THR 200.0198
CYS 210.0076
THR 220.0080
VAL 230.0124
SER 240.0230
GLY 250.0311
PHE 260.0119
SER 270.0059
LEU 280.0025
SER 290.0225
SER 290.0226
ASP 300.0179
TYR 310.0111
ALA 320.0034
MET 330.0050
SER 340.0106
TRP 350.0141
VAL 360.0133
ARG 370.0109
GLN 380.0082
ALA 390.0057
PRO 400.0150
GLY 410.0290
LYS 420.0149
GLY 430.0270
LEU 440.0116
GLU 450.0146
TRP 460.0137
ILE 470.0168
GLY 480.0136
ILE 490.0112
ILE 500.0085
TYR 510.0112
ALA 520.0186
SER 530.0348
GLY 540.0206
SER 550.0228
THR 560.0090
THR 560.0090
TYR 570.0085
TYR 580.0124
ALA 590.0212
SER 600.0430
TRP 610.0294
ALA 620.0042
LYS 630.0287
GLY 640.0415
ARG 650.0159
PHE 660.0165
THR 670.0171
ILE 680.0154
SER 690.0127
LYS 700.0123
THR 710.0438
SER 720.0537
THR 730.0347
THR 740.0095
VAL 750.0111
ASP 760.0120
LEU 770.0134
LYS 780.0114
ILE 790.0073
THR 800.0101
SER 810.0112
PRO 820.0111
THR 830.0086
THR 840.0089
GLU 850.0098
ASP 860.0038
THR 870.0060
ALA 880.0036
THR 890.0041
TYR 900.0034
PHE 910.0045
CYS 920.0059
CYS 920.0057
ALA 930.0045
ARG 940.0038
TYR 950.0031
TYR 960.0170
TYR 960.0168
ALA 970.0202
GLY 980.0106
SER 990.0090
ASP 1000.0138
ILE 1010.0102
ILE 1010.0102
TRP 1020.0073
GLY 1030.0064
PRO 1040.0191
GLY 1050.0132
THR 1060.0163
LEU 1070.0108
LEU 1070.0108
VAL 1080.0086
THR 1090.0085
VAL 1100.0066
SER 1110.0126
SER 1120.0252
ALA 1130.0176
SER 1140.0119
THR 1150.0040
LYS 1160.0053
GLY 1170.0048
PRO 1180.0047
SER 1190.0013
VAL 1200.0016
PHE 1210.0015
PRO 1220.0019
LEU 1230.0017
ALA 1240.0026
PRO 1250.0028
SER 1260.0059
GLY 1330.0060
THR 1340.0038
THR 1340.0037
ALA 1350.0033
ALA 1360.0035
LEU 1370.0035
GLY 1380.0051
CYS 1390.0048
CYS 1390.0048
LEU 1400.0043
VAL 1410.0037
LYS 1420.0022
ASP 1430.0024
TYR 1440.0037
PHE 1450.0021
PRO 1460.0032
GLU 1470.0047
GLU 1470.0046
PRO 1480.0040
VAL 1490.0037
THR 1500.0054
VAL 1510.0023
SER 1520.0022
TRP 1530.0043
ASN 1540.0091
SER 1550.0107
GLY 1560.0111
ALA 1570.0222
LEU 1580.0097
THR 1590.0092
SER 1600.0063
SER 1600.0063
GLY 1610.0059
VAL 1620.0060
HIS 1630.0055
THR 1640.0059
PHE 1650.0052
PRO 1660.0053
ALA 1670.0051
VAL 1680.0062
VAL 1680.0062
LEU 1690.0044
GLN 1700.0075
SER 1710.0167
SER 1720.0166
GLY 1730.0145
LEU 1740.0068
TYR 1750.0044
SER 1760.0047
SER 1760.0047
LEU 1770.0046
SER 1780.0059
SER 1780.0059
SER 1790.0059
VAL 1800.0058
VAL 1810.0051
THR 1820.0038
VAL 1830.0031
PRO 1840.0030
SER 1850.0059
SER 1850.0059
SER 1860.0088
SER 1870.0038
LEU 1880.0021
GLY 1890.0066
THR 1900.0162
GLN 1910.0030
GLN 1910.0032
THR 1920.0197
TYR 1930.0061
ILE 1940.0065
CYS 1950.0072
CYS 1950.0072
ASN 1960.0060
VAL 1970.0041
ASN 1980.0062
ASN 1980.0061
HIS 1990.0030
LYS 2000.0077
PRO 2010.0115
SER 2020.0163
ASN 2030.0172
THR 2040.0076
LYS 2050.0073
VAL 2060.0070
ASP 2070.0099
LYS 2080.0064
LYS 2090.0106
VAL 2100.0078
GLU 2110.0130
PRO 2120.0130
LYS 2130.0150
SER 2140.0198

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.