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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0475
ALA 10.0222
ASP 20.0140
VAL 30.0035
VAL 40.0039
MET 50.0054
THR 60.0066
GLN 70.0033
THR 80.0040
PRO 90.0051
SER 100.0112
SER 100.0113
SER 110.0090
VAL 120.0050
VAL 120.0051
SER 130.0068
SER 130.0068
ALA 140.0076
ALA 150.0082
VAL 160.0085
GLY 170.0096
GLY 180.0078
THR 190.0066
VAL 200.0055
THR 210.0036
THR 210.0036
ILE 220.0032
ASN 230.0037
CYS 240.0044
CYS 240.0045
GLN 250.0072
GLN 250.0072
ALA 260.0046
SER 270.0034
GLN 280.0076
SER 290.0097
ILE 300.0075
SER 310.0089
SER 310.0089
ALA 320.0095
TYR 330.0079
LEU 340.0032
ALA 350.0031
TRP 360.0032
TYR 370.0047
GLN 380.0057
GLN 390.0057
LYS 400.0088
PRO 410.0071
GLY 420.0095
GLN 430.0131
PRO 440.0101
PRO 450.0113
LYS 460.0064
LEU 470.0044
LEU 480.0048
ILE 490.0054
ILE 490.0054
TYR 500.0033
ASP 510.0020
ALA 520.0043
SER 530.0044
ASP 540.0058
LEU 550.0106
ALA 560.0061
SER 570.0147
SER 570.0147
GLY 580.0104
VAL 590.0134
SER 600.0255
SER 610.0159
ARG 620.0105
PHE 630.0086
LYS 640.0070
GLY 650.0053
SER 660.0019
GLY 670.0094
SER 680.0101
GLY 690.0104
THR 700.0077
GLN 710.0088
PHE 720.0086
THR 730.0019
LEU 740.0025
THR 750.0020
ILE 760.0022
SER 770.0022
SER 770.0022
ASP 780.0037
LEU 790.0075
GLU 800.0061
CYS 810.0044
ALA 820.0027
ASP 830.0022
ALA 840.0025
ALA 850.0055
THR 860.0050
TYR 870.0039
TYR 880.0027
CYS 890.0028
CYS 890.0028
GLN 900.0032
THR 910.0059
TYR 920.0045
TYR 930.0037
ALA 940.0057
ILE 950.0057
ILE 960.0068
THR 970.0048
TYR 980.0036
GLY 990.0085
ALA 1000.0069
ALA 1010.0064
PHE 1020.0056
GLY 1030.0049
GLY 1040.0053
GLY 1050.0056
THR 1060.0072
GLU 1070.0085
GLU 1070.0085
VAL 1080.0072
VAL 1090.0051
VAL 1100.0049
LYS 1110.0051
ARG 1120.0131
THR 1130.0154
VAL 1140.0089
ALA 1150.0071
ALA 1160.0081
PRO 1170.0088
SER 1180.0077
SER 1180.0077
VAL 1190.0078
PHE 1200.0091
ILE 1210.0087
PHE 1220.0064
PRO 1230.0062
PRO 1240.0071
SER 1250.0065
ASP 1260.0046
GLU 1270.0079
GLN 1280.0039
LEU 1290.0055
LYS 1300.0170
SER 1310.0246
GLY 1320.0258
THR 1330.0082
ALA 1340.0063
SER 1350.0063
VAL 1360.0053
VAL 1370.0050
CYS 1380.0051
LEU 1390.0030
LEU 1400.0024
ASN 1410.0034
ASN 1420.0048
ASN 1420.0048
PHE 1430.0045
TYR 1440.0056
PRO 1450.0068
ARG 1460.0078
GLU 1470.0084
ALA 1480.0105
LYS 1490.0103
VAL 1500.0052
GLN 1510.0051
TRP 1520.0020
LYS 1530.0045
VAL 1540.0024
ASP 1550.0060
ASN 1560.0152
ALA 1570.0117
LEU 1580.0102
GLN 1590.0087
SER 1600.0141
GLY 1610.0127
ASN 1620.0120
SER 1630.0120
GLN 1640.0101
GLU 1650.0086
SER 1660.0083
SER 1660.0083
VAL 1670.0061
VAL 1670.0061
THR 1680.0040
GLU 1690.0066
GLU 1690.0065
GLN 1700.0064
ASP 1710.0072
SER 1720.0110
LYS 1730.0132
ASP 1740.0097
CYS 1750.0096
THR 1760.0079
TYR 1770.0069
SER 1780.0024
LEU 1790.0038
SER 1800.0056
SER 1810.0042
THR 1820.0056
LEU 1830.0059
THR 1840.0072
LEU 1850.0051
SER 1860.0075
LYS 1870.0129
ALA 1880.0175
ASP 1890.0071
TYR 1900.0050
GLU 1910.0096
LYS 1920.0105
HIS 1930.0135
LYS 1940.0120
LYS 1940.0120
VAL 1950.0063
TYR 1960.0055
ALA 1970.0045
CYS 1980.0047
CYS 1980.0047
GLU 1990.0044
VAL 2000.0094
THR 2010.0143
HIS 2020.0147
GLN 2030.0111
GLY 2040.0086
LEU 2050.0224
SER 2060.0241
SER 2070.0214
PRO 2080.0149
VAL 2090.0077
THR 2100.0030
LYS 2110.0099
SER 2120.0098
PHE 2130.0095
ASN 2140.0108
ARG 2150.0115
GLY 2160.0150
GLU 2170.0346
SER 20.0140
VAL 30.0098
GLU 40.0081
GLU 50.0036
SER 60.0052
GLY 70.0066
GLY 80.0044
ARG 90.0051
LEU 100.0057
VAL 110.0062
THR 120.0097
PRO 130.0158
GLY 140.0151
THR 150.0126
PRO 160.0084
LEU 170.0025
THR 180.0028
LEU 190.0043
THR 200.0045
CYS 210.0015
THR 220.0041
VAL 230.0089
SER 240.0144
GLY 250.0193
PHE 260.0059
SER 270.0048
LEU 280.0064
SER 290.0097
SER 290.0097
ASP 300.0082
TYR 310.0070
ALA 320.0024
MET 330.0022
SER 340.0042
TRP 350.0058
VAL 360.0048
ARG 370.0029
GLN 380.0040
ALA 390.0175
PRO 400.0256
GLY 410.0353
LYS 420.0125
GLY 430.0151
LEU 440.0041
GLU 450.0051
TRP 460.0056
ILE 470.0058
GLY 480.0050
ILE 490.0048
ILE 500.0054
TYR 510.0068
ALA 520.0105
SER 530.0260
GLY 540.0195
SER 550.0141
THR 560.0068
THR 560.0068
TYR 570.0063
TYR 580.0066
ALA 590.0036
SER 600.0080
TRP 610.0085
ALA 620.0050
LYS 630.0090
GLY 640.0136
ARG 650.0067
PHE 660.0056
THR 670.0057
ILE 680.0052
SER 690.0053
LYS 700.0061
THR 710.0121
SER 720.0127
THR 730.0084
THR 740.0040
VAL 750.0043
ASP 760.0048
LEU 770.0031
LYS 780.0028
ILE 790.0036
THR 800.0077
SER 810.0083
PRO 820.0086
THR 830.0086
THR 840.0152
GLU 850.0129
ASP 860.0079
THR 870.0080
ALA 880.0083
THR 890.0030
TYR 900.0021
PHE 910.0040
CYS 920.0059
CYS 920.0058
ALA 930.0055
ARG 940.0040
TYR 950.0051
TYR 960.0089
TYR 960.0089
ALA 970.0061
GLY 980.0023
SER 990.0036
ASP 1000.0053
ILE 1010.0065
ILE 1010.0065
TRP 1020.0068
GLY 1030.0071
PRO 1040.0117
GLY 1050.0058
THR 1060.0050
LEU 1070.0051
LEU 1070.0051
VAL 1080.0045
THR 1090.0050
VAL 1100.0068
SER 1110.0082
SER 1120.0109
ALA 1130.0352
SER 1140.0326
THR 1150.0175
LYS 1160.0068
GLY 1170.0096
PRO 1180.0124
SER 1190.0056
VAL 1200.0031
PHE 1210.0054
PRO 1220.0063
LEU 1230.0037
ALA 1240.0046
PRO 1250.0103
SER 1260.0239
GLY 1330.0191
THR 1340.0080
THR 1340.0077
ALA 1350.0127
ALA 1360.0089
LEU 1370.0077
GLY 1380.0124
CYS 1390.0099
CYS 1390.0100
LEU 1400.0083
VAL 1410.0072
LYS 1420.0073
ASP 1430.0065
TYR 1440.0068
PHE 1450.0035
PRO 1460.0052
GLU 1470.0103
GLU 1470.0103
PRO 1480.0107
VAL 1490.0120
THR 1500.0154
VAL 1510.0055
SER 1520.0068
TRP 1530.0108
ASN 1540.0178
SER 1550.0229
GLY 1560.0241
ALA 1570.0460
LEU 1580.0190
THR 1590.0219
SER 1600.0153
SER 1600.0153
GLY 1610.0091
VAL 1620.0080
HIS 1630.0062
THR 1640.0082
PHE 1650.0083
PRO 1660.0035
ALA 1670.0050
VAL 1680.0039
VAL 1680.0040
LEU 1690.0047
GLN 1700.0058
SER 1710.0114
SER 1720.0106
GLY 1730.0095
LEU 1740.0048
TYR 1750.0037
SER 1760.0048
SER 1760.0048
LEU 1770.0064
SER 1780.0102
SER 1780.0102
SER 1790.0102
VAL 1800.0097
VAL 1810.0127
THR 1820.0102
VAL 1830.0084
PRO 1840.0066
SER 1850.0100
SER 1850.0101
SER 1860.0150
SER 1870.0053
LEU 1880.0096
GLY 1890.0171
THR 1900.0297
GLN 1910.0092
GLN 1910.0091
THR 1920.0374
TYR 1930.0136
ILE 1940.0147
CYS 1950.0162
CYS 1950.0160
ASN 1960.0123
VAL 1970.0087
ASN 1980.0134
ASN 1980.0133
HIS 1990.0128
LYS 2000.0125
PRO 2010.0141
SER 2020.0237
ASN 2030.0275
THR 2040.0165
LYS 2050.0158
VAL 2060.0092
ASP 2070.0166
LYS 2080.0170
LYS 2090.0222
VAL 2100.0126
GLU 2110.0336
PRO 2120.0351
LYS 2130.0344
SER 2140.0475

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.