CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0436
ALA 10.0436
ASP 20.0288
VAL 30.0106
VAL 40.0053
MET 50.0058
THR 60.0088
GLN 70.0044
THR 80.0065
PRO 90.0092
SER 100.0135
SER 100.0136
SER 110.0073
VAL 120.0020
VAL 120.0018
SER 130.0082
SER 130.0082
ALA 140.0106
ALA 150.0131
VAL 160.0112
GLY 170.0109
GLY 180.0116
THR 190.0051
VAL 200.0035
THR 210.0038
THR 210.0038
ILE 220.0025
ASN 230.0023
CYS 240.0047
CYS 240.0048
GLN 250.0135
GLN 250.0133
ALA 260.0088
SER 270.0114
GLN 280.0121
SER 290.0082
ILE 300.0043
SER 310.0044
SER 310.0044
ALA 320.0042
TYR 330.0033
LEU 340.0022
ALA 350.0026
TRP 360.0029
TYR 370.0043
GLN 380.0064
GLN 390.0064
LYS 400.0108
PRO 410.0103
GLY 420.0103
GLN 430.0175
PRO 440.0111
PRO 450.0038
LYS 460.0064
LEU 470.0050
LEU 480.0076
ILE 490.0069
ILE 490.0069
TYR 500.0058
ASP 510.0049
ALA 520.0051
SER 530.0052
ASP 540.0053
LEU 550.0167
ALA 560.0127
SER 570.0176
SER 570.0176
GLY 580.0209
VAL 590.0178
SER 600.0283
SER 610.0176
ARG 620.0129
PHE 630.0067
LYS 640.0046
GLY 650.0055
SER 660.0091
GLY 670.0120
SER 680.0075
GLY 690.0056
THR 700.0109
GLN 710.0126
PHE 720.0103
THR 730.0058
LEU 740.0042
THR 750.0028
ILE 760.0016
SER 770.0039
SER 770.0039
ASP 780.0050
LEU 790.0042
GLU 800.0046
CYS 810.0056
ALA 820.0055
ASP 830.0045
ALA 840.0041
ALA 850.0031
THR 860.0020
TYR 870.0030
TYR 880.0051
CYS 890.0040
CYS 890.0040
GLN 900.0039
THR 910.0033
TYR 920.0020
TYR 930.0027
ALA 940.0117
ILE 950.0108
ILE 960.0229
THR 970.0202
TYR 980.0123
GLY 990.0182
ALA 1000.0091
ALA 1010.0089
PHE 1020.0087
GLY 1030.0048
GLY 1040.0066
GLY 1050.0074
THR 1060.0058
GLU 1070.0050
GLU 1070.0050
VAL 1080.0025
VAL 1090.0065
VAL 1100.0074
LYS 1110.0113
ARG 1120.0166
THR 1130.0165
VAL 1140.0150
ALA 1150.0110
ALA 1160.0075
PRO 1170.0037
SER 1180.0023
SER 1180.0023
VAL 1190.0041
PHE 1200.0076
ILE 1210.0049
PHE 1220.0024
PRO 1230.0017
PRO 1240.0036
SER 1250.0083
ASP 1260.0100
GLU 1270.0087
GLN 1280.0044
LEU 1290.0025
LYS 1300.0067
SER 1310.0076
GLY 1320.0076
THR 1330.0040
ALA 1340.0033
SER 1350.0026
VAL 1360.0029
VAL 1370.0037
CYS 1380.0045
LEU 1390.0049
LEU 1400.0032
ASN 1410.0031
ASN 1420.0049
ASN 1420.0050
PHE 1430.0063
TYR 1440.0093
PRO 1450.0115
ARG 1460.0089
GLU 1470.0046
ALA 1480.0042
LYS 1490.0085
VAL 1500.0044
GLN 1510.0021
TRP 1520.0024
LYS 1530.0034
VAL 1540.0010
ASP 1550.0045
ASN 1560.0080
ALA 1570.0030
LEU 1580.0042
GLN 1590.0052
SER 1600.0093
GLY 1610.0085
ASN 1620.0071
SER 1630.0077
GLN 1640.0073
GLU 1650.0060
SER 1660.0031
SER 1660.0031
VAL 1670.0027
VAL 1670.0027
THR 1680.0030
GLU 1690.0046
GLU 1690.0047
GLN 1700.0043
ASP 1710.0036
SER 1720.0124
LYS 1730.0105
ASP 1740.0043
CYS 1750.0071
THR 1760.0063
TYR 1770.0061
SER 1780.0037
LEU 1790.0041
SER 1800.0054
SER 1810.0055
THR 1820.0046
LEU 1830.0041
THR 1840.0037
LEU 1850.0031
SER 1860.0059
LYS 1870.0076
ALA 1880.0063
ASP 1890.0077
TYR 1900.0059
GLU 1910.0045
LYS 1920.0092
HIS 1930.0012
LYS 1940.0039
LYS 1940.0039
VAL 1950.0069
TYR 1960.0034
ALA 1970.0035
CYS 1980.0034
CYS 1980.0034
GLU 1990.0059
VAL 2000.0066
THR 2010.0083
HIS 2020.0072
GLN 2030.0092
GLY 2040.0112
LEU 2050.0062
SER 2060.0157
SER 2070.0180
PRO 2080.0104
VAL 2090.0097
THR 2100.0107
LYS 2110.0069
SER 2120.0055
PHE 2130.0058
ASN 2140.0057
ARG 2150.0039
GLY 2160.0056
GLU 2170.0218
SER 20.0194
VAL 30.0223
GLU 40.0280
GLU 50.0234
SER 60.0222
GLY 70.0180
GLY 80.0145
ARG 90.0079
LEU 100.0071
VAL 110.0102
THR 120.0052
PRO 130.0107
GLY 140.0215
THR 150.0215
PRO 160.0223
LEU 170.0152
THR 180.0096
LEU 190.0080
THR 200.0144
CYS 210.0149
THR 220.0137
VAL 230.0120
SER 240.0195
GLY 250.0257
PHE 260.0113
SER 270.0062
LEU 280.0104
SER 290.0104
SER 290.0105
ASP 300.0114
TYR 310.0095
ALA 320.0063
MET 330.0059
SER 340.0080
TRP 350.0112
VAL 360.0093
ARG 370.0092
GLN 380.0126
ALA 390.0231
PRO 400.0291
GLY 410.0423
LYS 420.0187
GLY 430.0103
LEU 440.0111
GLU 450.0131
TRP 460.0128
ILE 470.0121
GLY 480.0119
ILE 490.0154
ILE 500.0140
TYR 510.0110
ALA 520.0088
SER 530.0217
GLY 540.0204
SER 550.0195
THR 560.0222
THR 560.0222
TYR 570.0194
TYR 580.0185
ALA 590.0147
SER 600.0263
TRP 610.0251
ALA 620.0131
LYS 630.0201
GLY 640.0167
ARG 650.0088
PHE 660.0104
THR 670.0155
ILE 680.0128
SER 690.0111
LYS 700.0099
THR 710.0278
SER 720.0330
THR 730.0186
THR 740.0041
VAL 750.0045
ASP 760.0049
LEU 770.0068
LYS 780.0066
ILE 790.0082
THR 800.0086
SER 810.0131
PRO 820.0144
THR 830.0136
THR 840.0086
GLU 850.0081
ASP 860.0090
THR 870.0093
ALA 880.0089
THR 890.0031
TYR 900.0065
PHE 910.0105
CYS 920.0169
CYS 920.0170
ALA 930.0127
ARG 940.0113
TYR 950.0108
TYR 960.0143
TYR 960.0145
ALA 970.0141
GLY 980.0053
SER 990.0062
ASP 1000.0070
ILE 1010.0130
ILE 1010.0129
TRP 1020.0157
GLY 1030.0229
PRO 1040.0239
GLY 1050.0176
THR 1060.0169
LEU 1070.0120
LEU 1070.0120
VAL 1080.0084
THR 1090.0063
VAL 1100.0086
SER 1110.0131
SER 1120.0285
ALA 1130.0209
SER 1140.0294
THR 1150.0175
LYS 1160.0159
GLY 1170.0116
PRO 1180.0131
SER 1190.0008
VAL 1200.0007
PHE 1210.0008
PRO 1220.0042
LEU 1230.0020
ALA 1240.0030
PRO 1250.0017
SER 1260.0067
GLY 1330.0254
THR 1340.0150
THR 1340.0148
ALA 1350.0192
ALA 1360.0073
LEU 1370.0067
GLY 1380.0089
CYS 1390.0028
CYS 1390.0029
LEU 1400.0026
VAL 1410.0024
LYS 1420.0085
ASP 1430.0079
TYR 1440.0091
PHE 1450.0097
PRO 1460.0076
GLU 1470.0043
GLU 1470.0043
PRO 1480.0071
VAL 1490.0051
THR 1500.0071
VAL 1510.0039
SER 1520.0050
TRP 1530.0055
ASN 1540.0095
SER 1550.0193
GLY 1560.0175
ALA 1570.0196
LEU 1580.0125
THR 1590.0124
SER 1600.0090
SER 1600.0090
GLY 1610.0054
VAL 1620.0084
HIS 1630.0060
THR 1640.0060
PHE 1650.0044
PRO 1660.0043
ALA 1670.0034
VAL 1680.0049
VAL 1680.0048
LEU 1690.0105
GLN 1700.0113
SER 1710.0180
SER 1720.0060
GLY 1730.0105
LEU 1740.0098
TYR 1750.0036
SER 1760.0042
SER 1760.0043
LEU 1770.0038
SER 1780.0051
SER 1780.0051
SER 1790.0059
VAL 1800.0066
VAL 1810.0107
THR 1820.0090
VAL 1830.0077
PRO 1840.0100
SER 1850.0108
SER 1850.0108
SER 1860.0071
SER 1870.0036
LEU 1880.0068
GLY 1890.0145
THR 1900.0112
GLN 1910.0100
GLN 1910.0100
THR 1920.0158
TYR 1930.0063
ILE 1940.0050
CYS 1950.0053
CYS 1950.0052
ASN 1960.0053
VAL 1970.0056
ASN 1980.0076
ASN 1980.0076
HIS 1990.0046
LYS 2000.0044
PRO 2010.0071
SER 2020.0094
ASN 2030.0153
THR 2040.0127
LYS 2050.0126
VAL 2060.0078
ASP 2070.0080
LYS 2080.0104
LYS 2090.0125
VAL 2100.0088
GLU 2110.0217
PRO 2120.0214
LYS 2130.0211
SER 2140.0362

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.