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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0799
ALA 10.0250
ASP 20.0143
VAL 30.0076
VAL 40.0118
MET 50.0069
THR 60.0059
GLN 70.0066
THR 80.0082
PRO 90.0098
SER 100.0207
SER 100.0207
SER 110.0136
VAL 120.0091
VAL 120.0089
SER 130.0095
SER 130.0094
ALA 140.0101
ALA 150.0108
VAL 160.0118
GLY 170.0189
GLY 180.0156
THR 190.0114
VAL 200.0102
THR 210.0124
THR 210.0123
ILE 220.0070
ASN 230.0056
CYS 240.0045
CYS 240.0047
GLN 250.0032
GLN 250.0033
ALA 260.0050
SER 270.0090
GLN 280.0082
SER 290.0078
ILE 300.0097
SER 310.0124
SER 310.0123
ALA 320.0071
TYR 330.0139
LEU 340.0059
ALA 350.0083
TRP 360.0098
TYR 370.0009
GLN 380.0023
GLN 390.0041
LYS 400.0068
PRO 410.0070
GLY 420.0078
GLN 430.0078
PRO 440.0062
PRO 450.0050
LYS 460.0065
LEU 470.0053
LEU 480.0033
ILE 490.0123
ILE 490.0123
TYR 500.0109
ASP 510.0093
ALA 520.0110
SER 530.0146
ASP 540.0179
LEU 550.0133
ALA 560.0112
SER 570.0085
SER 570.0085
GLY 580.0254
VAL 590.0140
SER 600.0225
SER 610.0159
ARG 620.0111
PHE 630.0069
LYS 640.0158
GLY 650.0163
SER 660.0167
GLY 670.0151
SER 680.0075
GLY 690.0116
THR 700.0047
GLN 710.0064
PHE 720.0090
THR 730.0132
LEU 740.0135
THR 750.0139
ILE 760.0100
SER 770.0106
SER 770.0106
ASP 780.0130
LEU 790.0130
GLU 800.0135
CYS 810.0137
ALA 820.0099
ASP 830.0103
ALA 840.0085
ALA 850.0070
THR 860.0072
TYR 870.0055
TYR 880.0041
CYS 890.0039
CYS 890.0039
GLN 900.0029
THR 910.0114
TYR 920.0132
TYR 930.0121
ALA 940.0158
ILE 950.0085
ILE 960.0078
THR 970.0110
TYR 980.0067
GLY 990.0087
ALA 1000.0072
ALA 1010.0068
PHE 1020.0048
GLY 1030.0037
GLY 1040.0079
GLY 1050.0090
THR 1060.0104
GLU 1070.0104
GLU 1070.0104
VAL 1080.0069
VAL 1090.0060
VAL 1100.0041
LYS 1110.0049
ARG 1120.0163
THR 1130.0235
VAL 1140.0201
ALA 1150.0125
ALA 1160.0113
PRO 1170.0119
SER 1180.0078
SER 1180.0078
VAL 1190.0079
PHE 1200.0073
ILE 1210.0044
PHE 1220.0013
PRO 1230.0031
PRO 1240.0094
SER 1250.0123
ASP 1260.0108
GLU 1270.0098
GLN 1280.0089
LEU 1290.0090
LYS 1300.0059
SER 1310.0204
GLY 1320.0269
THR 1330.0116
ALA 1340.0078
SER 1350.0037
VAL 1360.0011
VAL 1370.0021
CYS 1380.0043
LEU 1390.0050
LEU 1400.0056
ASN 1410.0062
ASN 1420.0063
ASN 1420.0063
PHE 1430.0061
TYR 1440.0067
PRO 1450.0085
ARG 1460.0058
GLU 1470.0025
ALA 1480.0148
LYS 1490.0205
VAL 1500.0111
GLN 1510.0053
TRP 1520.0057
LYS 1530.0065
VAL 1540.0048
ASP 1550.0066
ASN 1560.0103
ALA 1570.0101
LEU 1580.0106
GLN 1590.0112
SER 1600.0111
GLY 1610.0149
ASN 1620.0115
SER 1630.0057
GLN 1640.0048
GLU 1650.0057
SER 1660.0040
SER 1660.0040
VAL 1670.0050
VAL 1670.0050
THR 1680.0067
GLU 1690.0036
GLU 1690.0037
GLN 1700.0053
ASP 1710.0071
SER 1720.0093
LYS 1730.0163
ASP 1740.0067
CYS 1750.0047
THR 1760.0039
TYR 1770.0043
SER 1780.0059
LEU 1790.0043
SER 1800.0039
SER 1810.0030
THR 1820.0021
LEU 1830.0033
THR 1840.0014
LEU 1850.0038
SER 1860.0069
LYS 1870.0117
ALA 1880.0130
ASP 1890.0107
TYR 1900.0079
GLU 1910.0101
LYS 1920.0129
HIS 1930.0097
LYS 1940.0137
LYS 1940.0138
VAL 1950.0156
TYR 1960.0024
ALA 1970.0039
CYS 1980.0051
CYS 1980.0051
GLU 1990.0097
VAL 2000.0087
THR 2010.0148
HIS 2020.0125
GLN 2030.0035
GLY 2040.0154
LEU 2050.0108
SER 2060.0280
SER 2070.0254
PRO 2080.0103
VAL 2090.0107
THR 2100.0149
LYS 2110.0067
SER 2120.0050
PHE 2130.0062
ASN 2140.0149
ARG 2150.0078
GLY 2160.0224
GLU 2170.0799
SER 20.0077
VAL 30.0076
GLU 40.0093
GLU 50.0053
SER 60.0049
GLY 70.0072
GLY 80.0102
ARG 90.0091
LEU 100.0078
VAL 110.0050
THR 120.0078
PRO 130.0118
GLY 140.0153
THR 150.0128
PRO 160.0182
LEU 170.0079
THR 180.0073
LEU 190.0070
THR 200.0034
CYS 210.0047
THR 220.0058
VAL 230.0059
SER 240.0070
GLY 250.0075
PHE 260.0035
SER 270.0038
LEU 280.0059
SER 290.0075
SER 290.0075
ASP 300.0019
TYR 310.0046
ALA 320.0026
MET 330.0038
SER 340.0043
TRP 350.0017
VAL 360.0018
ARG 370.0030
GLN 380.0056
ALA 390.0142
PRO 400.0224
GLY 410.0347
LYS 420.0138
GLY 430.0165
LEU 440.0024
GLU 450.0037
TRP 460.0044
ILE 470.0079
GLY 480.0059
ILE 490.0045
ILE 500.0034
TYR 510.0021
ALA 520.0026
SER 530.0092
GLY 540.0027
SER 550.0087
THR 560.0067
THR 560.0067
TYR 570.0083
TYR 580.0131
ALA 590.0213
SER 600.0217
TRP 610.0178
ALA 620.0124
LYS 630.0236
GLY 640.0436
ARG 650.0208
PHE 660.0131
THR 670.0147
ILE 680.0057
SER 690.0029
LYS 700.0024
THR 710.0201
SER 720.0254
THR 730.0161
THR 740.0042
VAL 750.0046
ASP 760.0041
LEU 770.0099
LYS 780.0092
ILE 790.0082
THR 800.0149
SER 810.0126
PRO 820.0096
THR 830.0108
THR 840.0090
GLU 850.0091
ASP 860.0036
THR 870.0038
ALA 880.0028
THR 890.0022
TYR 900.0022
PHE 910.0033
CYS 920.0051
CYS 920.0051
ALA 930.0044
ARG 940.0040
TYR 950.0056
TYR 960.0076
TYR 960.0077
ALA 970.0125
GLY 980.0077
SER 990.0048
ASP 1000.0039
ILE 1010.0052
ILE 1010.0052
TRP 1020.0058
GLY 1030.0074
PRO 1040.0093
GLY 1050.0056
THR 1060.0042
LEU 1070.0053
LEU 1070.0052
VAL 1080.0041
THR 1090.0045
VAL 1100.0041
SER 1110.0051
SER 1120.0087
ALA 1130.0139
SER 1140.0141
THR 1150.0125
LYS 1160.0124
GLY 1170.0074
PRO 1180.0050
SER 1190.0065
VAL 1200.0047
PHE 1210.0053
PRO 1220.0065
LEU 1230.0046
ALA 1240.0059
PRO 1250.0082
SER 1260.0093
GLY 1330.0128
THR 1340.0101
THR 1340.0100
ALA 1350.0061
ALA 1360.0040
LEU 1370.0045
GLY 1380.0045
CYS 1390.0024
CYS 1390.0024
LEU 1400.0056
VAL 1410.0061
LYS 1420.0086
ASP 1430.0053
TYR 1440.0036
PHE 1450.0075
PRO 1460.0085
GLU 1470.0072
GLU 1470.0071
PRO 1480.0047
VAL 1490.0042
THR 1500.0049
VAL 1510.0046
SER 1520.0058
TRP 1530.0070
ASN 1540.0070
SER 1550.0083
GLY 1560.0154
ALA 1570.0220
LEU 1580.0071
THR 1590.0156
SER 1600.0165
SER 1600.0165
GLY 1610.0113
VAL 1620.0090
HIS 1630.0074
THR 1640.0080
PHE 1650.0071
PRO 1660.0053
ALA 1670.0075
VAL 1680.0113
VAL 1680.0113
LEU 1690.0110
GLN 1700.0096
SER 1710.0158
SER 1720.0110
GLY 1730.0153
LEU 1740.0081
TYR 1750.0020
SER 1760.0064
SER 1760.0064
LEU 1770.0091
SER 1780.0061
SER 1780.0061
SER 1790.0052
VAL 1800.0041
VAL 1810.0049
THR 1820.0040
VAL 1830.0033
PRO 1840.0013
SER 1850.0097
SER 1850.0098
SER 1860.0150
SER 1870.0052
LEU 1880.0039
GLY 1890.0091
THR 1900.0178
GLN 1910.0052
GLN 1910.0051
THR 1920.0192
TYR 1930.0086
ILE 1940.0100
CYS 1950.0099
CYS 1950.0098
ASN 1960.0105
VAL 1970.0060
ASN 1980.0046
ASN 1980.0046
HIS 1990.0066
LYS 2000.0093
PRO 2010.0051
SER 2020.0053
ASN 2030.0120
THR 2040.0019
LYS 2050.0094
VAL 2060.0118
ASP 2070.0163
LYS 2080.0109
LYS 2090.0127
VAL 2100.0081
GLU 2110.0132
PRO 2120.0147
LYS 2130.0164
SER 2140.0356

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.