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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0307
ALA 10.0132
ASP 20.0127
VAL 30.0129
VAL 40.0135
MET 50.0121
THR 60.0119
GLN 70.0107
THR 80.0093
PRO 90.0089
SER 100.0113
SER 100.0113
SER 110.0103
VAL 120.0082
VAL 120.0082
SER 130.0088
SER 130.0089
ALA 140.0082
ALA 150.0092
VAL 160.0091
GLY 170.0074
GLY 180.0062
THR 190.0040
VAL 200.0045
THR 210.0042
THR 210.0042
ILE 220.0062
ASN 230.0075
CYS 240.0097
CYS 240.0097
GLN 250.0113
GLN 250.0112
ALA 260.0123
SER 270.0138
GLN 280.0137
SER 290.0130
ILE 300.0123
SER 310.0118
SER 310.0118
ALA 320.0106
TYR 330.0109
LEU 340.0101
ALA 350.0094
TRP 360.0085
TYR 370.0079
GLN 380.0075
GLN 390.0089
LYS 400.0076
PRO 410.0094
GLY 420.0101
GLN 430.0101
PRO 440.0108
PRO 450.0095
LYS 460.0092
LEU 470.0088
LEU 480.0072
ILE 490.0074
ILE 490.0074
TYR 500.0087
ASP 510.0093
ALA 520.0086
SER 530.0071
ASP 540.0071
LEU 550.0062
ALA 560.0075
SER 570.0069
SER 570.0069
GLY 580.0055
VAL 590.0049
SER 600.0022
SER 610.0013
ARG 620.0013
PHE 630.0026
LYS 640.0034
GLY 650.0058
SER 660.0067
GLY 670.0087
SER 680.0103
GLY 690.0119
THR 700.0119
GLN 710.0102
PHE 720.0088
THR 730.0064
LEU 740.0054
THR 750.0031
ILE 760.0031
SER 770.0030
SER 770.0029
ASP 780.0051
LEU 790.0064
GLU 800.0079
CYS 810.0096
ALA 820.0080
ASP 830.0069
ALA 840.0087
ALA 850.0086
THR 860.0092
TYR 870.0080
TYR 880.0095
CYS 890.0096
CYS 890.0096
GLN 900.0105
THR 910.0114
TYR 920.0117
TYR 930.0122
ALA 940.0120
ILE 950.0119
ILE 960.0119
THR 970.0131
TYR 980.0128
GLY 990.0123
ALA 1000.0114
ALA 1010.0111
PHE 1020.0104
GLY 1030.0115
GLY 1040.0119
GLY 1050.0104
THR 1060.0096
GLU 1070.0100
GLU 1070.0100
VAL 1080.0084
VAL 1090.0105
VAL 1100.0102
LYS 1110.0113
ARG 1120.0126
THR 1130.0122
VAL 1140.0114
ALA 1150.0097
ALA 1160.0075
PRO 1170.0058
SER 1180.0031
SER 1180.0031
VAL 1190.0027
PHE 1200.0045
ILE 1210.0074
PHE 1220.0094
PRO 1230.0127
PRO 1240.0139
SER 1250.0134
ASP 1260.0159
GLU 1270.0158
GLN 1280.0169
LEU 1290.0194
LYS 1300.0228
SER 1310.0241
GLY 1320.0257
THR 1330.0215
ALA 1340.0176
SER 1350.0144
VAL 1360.0134
VAL 1370.0105
CYS 1380.0077
LEU 1390.0064
LEU 1400.0057
ASN 1410.0059
ASN 1420.0081
ASN 1420.0081
PHE 1430.0087
TYR 1440.0106
PRO 1450.0120
ARG 1460.0118
GLU 1470.0110
ALA 1480.0094
LYS 1490.0081
VAL 1500.0078
GLN 1510.0097
TRP 1520.0124
LYS 1530.0147
VAL 1540.0194
ASP 1550.0218
ASN 1560.0187
ALA 1570.0200
LEU 1580.0176
GLN 1590.0191
SER 1600.0194
GLY 1610.0218
ASN 1620.0204
SER 1630.0146
GLN 1640.0147
GLU 1650.0130
SER 1660.0114
SER 1660.0115
VAL 1670.0106
VAL 1670.0105
THR 1680.0112
GLU 1690.0118
GLU 1690.0118
GLN 1700.0119
ASP 1710.0117
SER 1720.0112
LYS 1730.0116
ASP 1740.0110
CYS 1750.0119
THR 1760.0108
TYR 1770.0104
SER 1780.0085
LEU 1790.0087
SER 1800.0090
SER 1810.0110
THR 1820.0131
LEU 1830.0152
THR 1840.0192
LEU 1850.0224
SER 1860.0264
LYS 1870.0260
ALA 1880.0307
ASP 1890.0291
TYR 1900.0250
GLU 1910.0278
LYS 1920.0305
HIS 1930.0268
LYS 1940.0245
LYS 1940.0245
VAL 1950.0201
TYR 1960.0157
ALA 1970.0117
CYS 1980.0082
CYS 1980.0083
GLU 1990.0053
VAL 2000.0038
THR 2010.0048
HIS 2020.0076
GLN 2030.0099
GLY 2040.0092
LEU 2050.0071
SER 2060.0087
SER 2070.0055
PRO 2080.0023
VAL 2090.0030
THR 2100.0057
LYS 2110.0074
SER 2120.0112
PHE 2130.0143
ASN 2140.0201
ARG 2150.0220
GLY 2160.0240
GLU 2170.0232
SER 20.0174
VAL 30.0159
GLU 40.0156
GLU 50.0128
SER 60.0122
GLY 70.0100
GLY 80.0067
ARG 90.0067
LEU 100.0067
VAL 110.0079
THR 120.0080
PRO 130.0080
GLY 140.0074
THR 150.0079
PRO 160.0080
LEU 170.0077
THR 180.0085
LEU 190.0093
THR 200.0123
CYS 210.0136
THR 220.0161
VAL 230.0173
SER 240.0193
GLY 250.0202
PHE 260.0187
SER 270.0185
LEU 280.0169
SER 290.0182
SER 290.0182
ASP 300.0174
TYR 310.0155
ALA 320.0134
MET 330.0129
SER 340.0114
TRP 350.0098
VAL 360.0093
ARG 370.0092
GLN 380.0079
ALA 390.0077
PRO 400.0098
GLY 410.0098
LYS 420.0088
GLY 430.0090
LEU 440.0094
GLU 450.0092
TRP 460.0099
ILE 470.0089
GLY 480.0096
ILE 490.0108
ILE 500.0124
TYR 510.0134
ALA 520.0151
SER 530.0158
GLY 540.0144
SER 550.0129
THR 560.0112
THR 560.0112
TYR 570.0102
TYR 580.0093
ALA 590.0087
SER 600.0084
TRP 610.0083
ALA 620.0081
LYS 630.0077
GLY 640.0074
ARG 650.0073
PHE 660.0080
THR 670.0088
ILE 680.0107
SER 690.0123
LYS 700.0142
THR 710.0165
SER 720.0184
THR 730.0182
THR 740.0157
VAL 750.0135
ASP 760.0119
LEU 770.0096
LYS 780.0086
ILE 790.0075
THR 800.0073
SER 810.0070
PRO 820.0075
THR 830.0073
THR 840.0080
GLU 850.0078
ASP 860.0074
THR 870.0079
ALA 880.0083
THR 890.0093
TYR 900.0086
PHE 910.0095
CYS 920.0120
CYS 920.0120
ALA 930.0122
ARG 940.0130
TYR 950.0128
TYR 960.0126
TYR 960.0126
ALA 970.0112
GLY 980.0109
SER 990.0117
ASP 1000.0122
ILE 1010.0137
ILE 1010.0137
TRP 1020.0132
GLY 1030.0139
PRO 1040.0142
GLY 1050.0109
THR 1060.0097
LEU 1070.0067
LEU 1070.0067
VAL 1080.0070
THR 1090.0066
VAL 1100.0073
SER 1110.0070
SER 1120.0073
ALA 1130.0049
SER 1140.0029
THR 1150.0015
LYS 1160.0058
GLY 1170.0084
PRO 1180.0113
SER 1190.0148
VAL 1200.0140
PHE 1210.0132
PRO 1220.0122
LEU 1230.0105
ALA 1240.0097
PRO 1250.0086
SER 1260.0084
GLY 1330.0040
THR 1340.0031
THR 1340.0030
ALA 1350.0049
ALA 1360.0060
LEU 1370.0086
GLY 1380.0105
CYS 1390.0124
CYS 1390.0124
LEU 1400.0125
VAL 1410.0132
LYS 1420.0118
ASP 1430.0111
TYR 1440.0106
PHE 1450.0029
PRO 1460.0029
GLU 1470.0045
GLU 1470.0045
PRO 1480.0080
VAL 1490.0103
THR 1500.0133
VAL 1510.0143
SER 1520.0145
TRP 1530.0139
ASN 1540.0150
SER 1550.0170
GLY 1560.0158
ALA 1570.0142
LEU 1580.0121
THR 1590.0121
SER 1600.0094
SER 1600.0094
GLY 1610.0079
VAL 1620.0099
HIS 1630.0092
THR 1640.0113
PHE 1650.0116
PRO 1660.0116
ALA 1670.0124
VAL 1680.0127
VAL 1680.0128
LEU 1690.0113
GLN 1700.0116
SER 1710.0111
SER 1720.0096
GLY 1730.0080
LEU 1740.0084
TYR 1750.0095
SER 1760.0112
SER 1760.0112
LEU 1770.0127
SER 1780.0120
SER 1780.0121
SER 1790.0114
VAL 1800.0094
VAL 1810.0084
THR 1820.0059
VAL 1830.0058
PRO 1840.0044
SER 1850.0058
SER 1850.0058
SER 1860.0067
SER 1870.0077
LEU 1880.0096
GLY 1890.0116
THR 1900.0116
GLN 1910.0116
GLN 1910.0115
THR 1920.0135
TYR 1930.0125
ILE 1940.0143
CYS 1950.0144
CYS 1950.0144
ASN 1960.0158
VAL 1970.0145
ASN 1980.0143
ASN 1980.0143
HIS 1990.0108
LYS 2000.0106
PRO 2010.0072
SER 2020.0086
ASN 2030.0115
THR 2040.0127
LYS 2050.0159
VAL 2060.0158
ASP 2070.0166
LYS 2080.0151
LYS 2090.0144
VAL 2100.0129
GLU 2110.0118
PRO 2120.0112
LYS 2130.0137
SER 2140.0213

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.