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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0410
ALA 10.0401
ASP 20.0277
VAL 30.0227
VAL 40.0156
MET 50.0100
THR 60.0116
GLN 70.0188
THR 80.0185
PRO 90.0169
SER 100.0119
SER 100.0119
SER 110.0092
VAL 120.0153
VAL 120.0151
SER 130.0131
SER 130.0131
ALA 140.0092
ALA 150.0103
VAL 160.0097
GLY 170.0102
GLY 180.0071
THR 190.0071
VAL 200.0068
THR 210.0074
THR 210.0075
ILE 220.0051
ASN 230.0085
CYS 240.0114
CYS 240.0113
GLN 250.0113
GLN 250.0113
ALA 260.0041
SER 270.0183
GLN 280.0131
SER 290.0092
ILE 300.0081
SER 310.0127
SER 310.0126
ALA 320.0119
TYR 330.0084
LEU 340.0018
ALA 350.0057
TRP 360.0086
TYR 370.0093
GLN 380.0105
GLN 390.0108
LYS 400.0138
PRO 410.0122
GLY 420.0115
GLN 430.0133
PRO 440.0127
PRO 450.0097
LYS 460.0149
LEU 470.0118
LEU 480.0116
ILE 490.0149
ILE 490.0149
TYR 500.0108
ASP 510.0086
ALA 520.0094
SER 530.0134
ASP 540.0153
LEU 550.0131
ALA 560.0073
SER 570.0174
SER 570.0174
GLY 580.0088
VAL 590.0031
SER 600.0117
SER 610.0168
ARG 620.0129
PHE 630.0142
LYS 640.0144
GLY 650.0150
SER 660.0136
GLY 670.0125
SER 680.0059
GLY 690.0023
THR 700.0099
GLN 710.0126
PHE 720.0138
THR 730.0069
LEU 740.0066
THR 750.0051
ILE 760.0018
SER 770.0028
SER 770.0028
ASP 780.0037
LEU 790.0079
GLU 800.0081
CYS 810.0073
ALA 820.0130
ASP 830.0095
ALA 840.0112
ALA 850.0118
THR 860.0072
TYR 870.0051
TYR 880.0064
CYS 890.0049
CYS 890.0049
GLN 900.0047
THR 910.0073
TYR 920.0072
TYR 930.0094
ALA 940.0092
ILE 950.0089
ILE 960.0138
THR 970.0063
TYR 980.0108
GLY 990.0168
ALA 1000.0085
ALA 1010.0076
PHE 1020.0049
GLY 1030.0095
GLY 1040.0145
GLY 1050.0087
THR 1060.0062
GLU 1070.0077
GLU 1070.0076
VAL 1080.0107
VAL 1090.0136
VAL 1100.0061
LYS 1110.0069
ARG 1120.0248
THR 1130.0208
VAL 1140.0168
ALA 1150.0045
ALA 1160.0080
PRO 1170.0088
SER 1180.0066
SER 1180.0066
VAL 1190.0037
PHE 1200.0014
ILE 1210.0025
PHE 1220.0030
PRO 1230.0071
PRO 1240.0145
SER 1250.0122
ASP 1260.0154
GLU 1270.0105
GLN 1280.0061
LEU 1290.0168
LYS 1300.0291
SER 1310.0279
GLY 1320.0405
THR 1330.0191
ALA 1340.0187
SER 1350.0178
VAL 1360.0036
VAL 1370.0031
CYS 1380.0029
LEU 1390.0026
LEU 1400.0047
ASN 1410.0053
ASN 1420.0074
ASN 1420.0075
PHE 1430.0054
TYR 1440.0083
PRO 1450.0149
ARG 1460.0096
GLU 1470.0086
ALA 1480.0065
LYS 1490.0052
VAL 1500.0037
GLN 1510.0056
TRP 1520.0055
LYS 1530.0065
VAL 1540.0061
ASP 1550.0050
ASN 1560.0207
ALA 1570.0044
LEU 1580.0067
GLN 1590.0107
SER 1600.0094
GLY 1610.0121
ASN 1620.0085
SER 1630.0052
GLN 1640.0071
GLU 1650.0039
SER 1660.0066
SER 1660.0067
VAL 1670.0076
VAL 1670.0077
THR 1680.0071
GLU 1690.0086
GLU 1690.0087
GLN 1700.0062
ASP 1710.0075
SER 1720.0183
LYS 1730.0162
ASP 1740.0127
CYS 1750.0094
THR 1760.0079
TYR 1770.0075
SER 1780.0066
LEU 1790.0055
SER 1800.0042
SER 1810.0035
THR 1820.0034
LEU 1830.0030
THR 1840.0095
LEU 1850.0090
SER 1860.0125
LYS 1870.0246
ALA 1880.0183
ASP 1890.0049
TYR 1900.0033
GLU 1910.0029
LYS 1920.0070
HIS 1930.0113
LYS 1940.0120
LYS 1940.0120
VAL 1950.0114
TYR 1960.0057
ALA 1970.0052
CYS 1980.0053
CYS 1980.0053
GLU 1990.0054
VAL 2000.0035
THR 2010.0061
HIS 2020.0125
GLN 2030.0259
GLY 2040.0251
LEU 2050.0276
SER 2060.0237
SER 2070.0410
PRO 2080.0116
VAL 2090.0095
THR 2100.0113
LYS 2110.0076
SER 2120.0078
PHE 2130.0096
ASN 2140.0115
ARG 2150.0120
GLY 2160.0128
GLU 2170.0222
SER 20.0139
VAL 30.0131
GLU 40.0137
GLU 50.0118
SER 60.0131
GLY 70.0129
GLY 80.0062
ARG 90.0050
LEU 100.0040
VAL 110.0056
THR 120.0052
PRO 130.0042
GLY 140.0030
THR 150.0028
PRO 160.0045
LEU 170.0055
THR 180.0069
LEU 190.0079
THR 200.0141
CYS 210.0121
THR 220.0101
VAL 230.0111
SER 240.0135
GLY 250.0186
PHE 260.0044
SER 270.0077
LEU 280.0103
SER 290.0085
SER 290.0085
ASP 300.0079
TYR 310.0077
ALA 320.0040
MET 330.0041
SER 340.0042
TRP 350.0038
VAL 360.0039
ARG 370.0046
GLN 380.0147
ALA 390.0074
PRO 400.0161
GLY 410.0392
LYS 420.0224
GLY 430.0403
LEU 440.0108
GLU 450.0117
TRP 460.0098
ILE 470.0044
GLY 480.0042
ILE 490.0036
ILE 500.0053
TYR 510.0021
ALA 520.0024
SER 530.0059
GLY 540.0046
SER 550.0051
THR 560.0056
THR 560.0056
TYR 570.0076
TYR 580.0097
ALA 590.0100
SER 600.0107
TRP 610.0085
ALA 620.0079
LYS 630.0047
GLY 640.0122
ARG 650.0100
PHE 660.0076
THR 670.0074
ILE 680.0099
SER 690.0099
LYS 700.0110
THR 710.0266
SER 720.0342
THR 730.0176
THR 740.0088
VAL 750.0088
ASP 760.0101
LEU 770.0044
LYS 780.0038
ILE 790.0036
THR 800.0071
SER 810.0046
PRO 820.0054
THR 830.0068
THR 840.0059
GLU 850.0052
ASP 860.0024
THR 870.0009
ALA 880.0025
THR 890.0042
TYR 900.0047
PHE 910.0056
CYS 920.0078
CYS 920.0078
ALA 930.0057
ARG 940.0054
TYR 950.0051
TYR 960.0123
TYR 960.0122
ALA 970.0106
GLY 980.0059
SER 990.0053
ASP 1000.0059
ILE 1010.0044
ILE 1010.0044
TRP 1020.0040
GLY 1030.0043
PRO 1040.0092
GLY 1050.0064
THR 1060.0061
LEU 1070.0030
LEU 1070.0030
VAL 1080.0031
THR 1090.0022
VAL 1100.0041
SER 1110.0050
SER 1120.0066
ALA 1130.0047
SER 1140.0101
THR 1150.0071
LYS 1160.0076
GLY 1170.0053
PRO 1180.0041
SER 1190.0023
VAL 1200.0040
PHE 1210.0050
PRO 1220.0050
LEU 1230.0032
ALA 1240.0033
PRO 1250.0121
SER 1260.0119
GLY 1330.0107
THR 1340.0060
THR 1340.0059
ALA 1350.0034
ALA 1360.0037
LEU 1370.0043
GLY 1380.0053
CYS 1390.0067
CYS 1390.0067
LEU 1400.0053
VAL 1410.0033
LYS 1420.0061
ASP 1430.0068
TYR 1440.0062
PHE 1450.0037
PRO 1460.0039
GLU 1470.0035
GLU 1470.0035
PRO 1480.0039
VAL 1490.0054
THR 1500.0070
VAL 1510.0077
SER 1520.0071
TRP 1530.0063
ASN 1540.0069
SER 1550.0095
GLY 1560.0080
ALA 1570.0089
LEU 1580.0058
THR 1590.0070
SER 1600.0048
SER 1600.0049
GLY 1610.0044
VAL 1620.0071
HIS 1630.0055
THR 1640.0059
PHE 1650.0044
PRO 1660.0083
ALA 1670.0097
VAL 1680.0109
VAL 1680.0110
LEU 1690.0124
GLN 1700.0147
SER 1710.0157
SER 1720.0102
GLY 1730.0103
LEU 1740.0097
TYR 1750.0072
SER 1760.0068
SER 1760.0068
LEU 1770.0067
SER 1780.0054
SER 1780.0054
SER 1790.0061
VAL 1800.0065
VAL 1810.0034
THR 1820.0027
VAL 1830.0028
PRO 1840.0044
SER 1850.0053
SER 1850.0053
SER 1860.0107
SER 1870.0082
LEU 1880.0085
GLY 1890.0123
THR 1900.0063
GLN 1910.0045
GLN 1910.0045
THR 1920.0066
TYR 1930.0032
ILE 1940.0029
CYS 1950.0055
CYS 1950.0055
ASN 1960.0075
VAL 1970.0086
ASN 1980.0096
ASN 1980.0096
HIS 1990.0043
LYS 2000.0043
PRO 2010.0052
SER 2020.0105
ASN 2030.0198
THR 2040.0125
LYS 2050.0113
VAL 2060.0101
ASP 2070.0085
LYS 2080.0120
LYS 2090.0129
VAL 2100.0100
GLU 2110.0234
PRO 2120.0245
LYS 2130.0139
SER 2140.0243

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.