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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0464
ALA 10.0182
ASP 20.0096
VAL 30.0060
VAL 40.0037
MET 50.0036
THR 60.0044
GLN 70.0047
THR 80.0048
PRO 90.0045
SER 100.0121
SER 100.0122
SER 110.0091
VAL 120.0066
VAL 120.0066
SER 130.0044
SER 130.0045
ALA 140.0033
ALA 150.0042
VAL 160.0034
GLY 170.0062
GLY 180.0077
THR 190.0066
VAL 200.0068
THR 210.0073
THR 210.0074
ILE 220.0057
ASN 230.0046
CYS 240.0038
CYS 240.0038
GLN 250.0050
GLN 250.0050
ALA 260.0041
SER 270.0036
GLN 280.0102
SER 290.0086
ILE 300.0056
SER 310.0066
SER 310.0066
ALA 320.0065
TYR 330.0066
LEU 340.0024
ALA 350.0021
TRP 360.0028
TYR 370.0018
GLN 380.0024
GLN 390.0042
LYS 400.0045
PRO 410.0058
GLY 420.0077
GLN 430.0044
PRO 440.0047
PRO 450.0050
LYS 460.0033
LEU 470.0033
LEU 480.0038
ILE 490.0033
ILE 490.0033
TYR 500.0012
ASP 510.0034
ALA 520.0027
SER 530.0047
ASP 540.0033
LEU 550.0065
ALA 560.0055
SER 570.0081
SER 570.0081
GLY 580.0150
VAL 590.0109
SER 600.0156
SER 610.0095
ARG 620.0063
PHE 630.0023
LYS 640.0069
GLY 650.0064
SER 660.0078
GLY 670.0052
SER 680.0020
GLY 690.0023
THR 700.0035
GLN 710.0038
PHE 720.0038
THR 730.0075
LEU 740.0075
THR 750.0087
ILE 760.0051
SER 770.0053
SER 770.0053
ASP 780.0056
LEU 790.0042
GLU 800.0031
CYS 810.0038
ALA 820.0064
ASP 830.0040
ALA 840.0026
ALA 850.0044
THR 860.0043
TYR 870.0039
TYR 880.0026
CYS 890.0013
CYS 890.0014
GLN 900.0025
THR 910.0058
TYR 920.0058
TYR 930.0062
ALA 940.0095
ILE 950.0104
ILE 960.0166
THR 970.0149
TYR 980.0125
GLY 990.0079
ALA 1000.0047
ALA 1010.0052
PHE 1020.0045
GLY 1030.0037
GLY 1040.0074
GLY 1050.0064
THR 1060.0080
GLU 1070.0065
GLU 1070.0065
VAL 1080.0045
VAL 1090.0017
VAL 1100.0023
LYS 1110.0043
ARG 1120.0158
THR 1130.0158
VAL 1140.0096
ALA 1150.0065
ALA 1160.0045
PRO 1170.0063
SER 1180.0105
SER 1180.0105
VAL 1190.0108
PHE 1200.0109
ILE 1210.0110
PHE 1220.0078
PRO 1230.0081
PRO 1240.0050
SER 1250.0150
ASP 1260.0192
GLU 1270.0152
GLN 1280.0097
LEU 1290.0058
LYS 1300.0160
SER 1310.0250
GLY 1320.0334
THR 1330.0094
ALA 1340.0066
SER 1350.0067
VAL 1360.0047
VAL 1370.0051
CYS 1380.0059
LEU 1390.0068
LEU 1400.0061
ASN 1410.0062
ASN 1420.0067
ASN 1420.0066
PHE 1430.0074
TYR 1440.0075
PRO 1450.0100
ARG 1460.0106
GLU 1470.0108
ALA 1480.0074
LYS 1490.0081
VAL 1500.0083
GLN 1510.0151
TRP 1520.0076
LYS 1530.0057
VAL 1540.0103
ASP 1550.0132
ASN 1560.0156
ALA 1570.0377
LEU 1580.0417
GLN 1590.0376
SER 1600.0343
GLY 1610.0331
ASN 1620.0222
SER 1630.0218
GLN 1640.0160
GLU 1650.0138
SER 1660.0058
SER 1660.0056
VAL 1670.0044
VAL 1670.0044
THR 1680.0046
GLU 1690.0050
GLU 1690.0050
GLN 1700.0031
ASP 1710.0021
SER 1720.0097
LYS 1730.0119
ASP 1740.0079
CYS 1750.0043
THR 1760.0053
TYR 1770.0050
SER 1780.0061
LEU 1790.0071
SER 1800.0091
SER 1810.0086
THR 1820.0097
LEU 1830.0104
THR 1840.0107
LEU 1850.0100
SER 1860.0102
LYS 1870.0154
ALA 1880.0158
ASP 1890.0143
TYR 1900.0080
GLU 1910.0042
LYS 1920.0073
HIS 1930.0155
LYS 1940.0219
LYS 1940.0219
VAL 1950.0258
TYR 1960.0124
ALA 1970.0121
CYS 1980.0117
CYS 1980.0118
GLU 1990.0028
VAL 2000.0026
THR 2010.0057
HIS 2020.0036
GLN 2030.0121
GLY 2040.0146
LEU 2050.0310
SER 2060.0294
SER 2070.0409
PRO 2080.0097
VAL 2090.0112
THR 2100.0174
LYS 2110.0203
SER 2120.0192
PHE 2130.0164
ASN 2140.0238
ARG 2150.0325
GLY 2160.0396
GLU 2170.0464
SER 20.0174
VAL 30.0082
GLU 40.0061
GLU 50.0060
SER 60.0057
GLY 70.0040
GLY 80.0049
ARG 90.0032
LEU 100.0020
VAL 110.0060
THR 120.0037
PRO 130.0017
GLY 140.0046
THR 150.0056
PRO 160.0043
LEU 170.0037
THR 180.0028
LEU 190.0023
THR 200.0065
CYS 210.0070
THR 220.0105
VAL 230.0054
SER 240.0218
GLY 250.0351
PHE 260.0072
SER 270.0079
LEU 280.0062
SER 290.0116
SER 290.0117
ASP 300.0111
TYR 310.0067
ALA 320.0041
MET 330.0035
SER 340.0037
TRP 350.0009
VAL 360.0015
ARG 370.0017
GLN 380.0074
ALA 390.0036
PRO 400.0036
GLY 410.0087
LYS 420.0106
GLY 430.0219
LEU 440.0058
GLU 450.0053
TRP 460.0043
ILE 470.0022
GLY 480.0032
ILE 490.0042
ILE 500.0055
TYR 510.0038
ALA 520.0032
SER 530.0058
GLY 540.0063
SER 550.0033
THR 560.0051
THR 560.0051
TYR 570.0060
TYR 580.0082
ALA 590.0053
SER 600.0073
TRP 610.0051
ALA 620.0022
LYS 630.0059
GLY 640.0075
ARG 650.0025
PHE 660.0035
THR 670.0064
ILE 680.0046
SER 690.0053
LYS 700.0066
THR 710.0141
SER 720.0209
THR 730.0181
THR 740.0081
VAL 750.0048
ASP 760.0032
LEU 770.0025
LYS 780.0040
ILE 790.0018
THR 800.0014
SER 810.0020
PRO 820.0059
THR 830.0103
THR 840.0113
GLU 850.0081
ASP 860.0065
THR 870.0063
ALA 880.0039
THR 890.0012
TYR 900.0008
PHE 910.0010
CYS 920.0034
CYS 920.0033
ALA 930.0029
ARG 940.0024
TYR 950.0046
TYR 960.0045
TYR 960.0046
ALA 970.0032
GLY 980.0030
SER 990.0017
ASP 1000.0039
ILE 1010.0072
ILE 1010.0072
TRP 1020.0044
GLY 1030.0034
PRO 1040.0022
GLY 1050.0017
THR 1060.0020
LEU 1070.0038
LEU 1070.0039
VAL 1080.0050
THR 1090.0047
VAL 1100.0069
SER 1110.0078
SER 1120.0216
ALA 1130.0093
SER 1140.0214
THR 1150.0109
LYS 1160.0067
GLY 1170.0047
PRO 1180.0057
SER 1190.0051
VAL 1200.0040
PHE 1210.0044
PRO 1220.0028
LEU 1230.0021
ALA 1240.0035
PRO 1250.0078
SER 1260.0080
GLY 1330.0116
THR 1340.0087
THR 1340.0088
ALA 1350.0039
ALA 1360.0020
LEU 1370.0019
GLY 1380.0027
CYS 1390.0024
CYS 1390.0024
LEU 1400.0022
VAL 1410.0022
LYS 1420.0048
ASP 1430.0033
TYR 1440.0019
PHE 1450.0007
PRO 1460.0015
GLU 1470.0032
GLU 1470.0031
PRO 1480.0033
VAL 1490.0030
THR 1500.0031
VAL 1510.0046
SER 1520.0029
TRP 1530.0031
ASN 1540.0090
SER 1550.0092
GLY 1560.0049
ALA 1570.0099
LEU 1580.0073
THR 1590.0044
SER 1600.0077
SER 1600.0077
GLY 1610.0106
VAL 1620.0096
HIS 1630.0108
THR 1640.0110
PHE 1650.0091
PRO 1660.0107
ALA 1670.0116
VAL 1680.0115
VAL 1680.0115
LEU 1690.0110
GLN 1700.0079
SER 1710.0080
SER 1720.0093
GLY 1730.0087
LEU 1740.0055
TYR 1750.0059
SER 1760.0067
SER 1760.0067
LEU 1770.0084
SER 1780.0066
SER 1780.0066
SER 1790.0073
VAL 1800.0076
VAL 1810.0050
THR 1820.0043
VAL 1830.0042
PRO 1840.0050
SER 1850.0071
SER 1850.0070
SER 1860.0120
SER 1870.0036
LEU 1880.0041
GLY 1890.0030
THR 1900.0144
GLN 1910.0083
GLN 1910.0083
THR 1920.0141
TYR 1930.0061
ILE 1940.0052
CYS 1950.0055
CYS 1950.0055
ASN 1960.0053
VAL 1970.0024
ASN 1980.0038
ASN 1980.0038
HIS 1990.0030
LYS 2000.0061
PRO 2010.0069
SER 2020.0104
ASN 2030.0150
THR 2040.0044
LYS 2050.0067
VAL 2060.0078
ASP 2070.0141
LYS 2080.0073
LYS 2090.0064
VAL 2100.0032
GLU 2110.0137
PRO 2120.0172
LYS 2130.0102
SER 2140.0183

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.