CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  9I43 Structure of anti-EV71 human monoclonal antibody 16-2-9D Fab  ***

Normal Mode Analysis for ID 2608161430261740727

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7138
mode 8 1.42 0.6659
mode 9 2.29 0.6924
mode 10 2.46 0.7531
mode 11 2.60 0.6321
mode 12 3.18 0.6011
mode 13 3.27 0.6403
mode 14 3.53 0.4254
mode 15 3.79 0.5561
mode 16 4.35 0.4134
mode 17 4.48 0.2772
mode 18 4.62 0.3199
mode 19 4.81 0.4770
mode 20 5.02 0.1463
mode 21 5.22 0.5013
mode 22 5.32 0.1103
mode 23 5.52 0.5883
mode 24 5.69 0.2767
mode 25 5.84 0.4676
mode 26 6.01 0.5033
mode 27 6.15 0.1654
mode 28 6.21 0.4126
mode 29 6.24 0.5143
mode 30 6.42 0.1357
mode 31 6.59 0.2935
mode 32 6.69 0.5423
mode 33 6.78 0.2426
mode 34 6.92 0.3983
mode 35 6.98 0.3148
mode 36 7.21 0.3639
mode 37 7.30 0.4211
mode 38 7.40 0.5381
mode 39 7.47 0.3789
mode 40 7.53 0.1952
mode 41 7.68 0.2737
mode 42 7.75 0.4634
mode 43 7.88 0.2367
mode 44 7.91 0.3578
mode 45 7.99 0.3679
mode 46 8.12 0.2279
mode 47 8.20 0.5006
mode 48 8.24 0.0800
mode 49 8.31 0.1997
mode 50 8.48 0.2049
mode 51 8.54 0.2905
mode 52 8.70 0.2402
mode 53 8.75 0.4335
mode 54 8.79 0.2608
mode 55 8.84 0.2493
mode 56 8.90 0.2202
mode 57 8.99 0.2945
mode 58 9.12 0.5215
mode 59 9.21 0.3730
mode 60 9.28 0.4651
mode 61 9.40 0.3089
mode 62 9.41 0.3810
mode 63 9.55 0.5276
mode 64 9.63 0.4759
mode 65 9.72 0.4329
mode 66 9.79 0.4185
mode 67 9.92 0.2655
mode 68 10.00 0.3904
mode 69 10.06 0.3325
mode 70 10.13 0.3542
mode 71 10.17 0.1184
mode 72 10.25 0.3473
mode 73 10.31 0.3292
mode 74 10.35 0.4316
mode 75 10.41 0.4202
mode 76 10.47 0.5268
mode 77 10.63 0.2975
mode 78 10.66 0.4481
mode 79 10.74 0.4249
mode 80 10.81 0.4577
mode 81 10.84 0.4249
mode 82 10.90 0.3200
mode 83 10.95 0.4511
mode 84 11.02 0.3619
mode 85 11.05 0.4545
mode 86 11.11 0.3096
mode 87 11.20 0.4334
mode 88 11.21 0.3403
mode 89 11.28 0.4681
mode 90 11.40 0.4103
mode 91 11.44 0.4459
mode 92 11.47 0.3759
mode 93 11.52 0.4159
mode 94 11.63 0.1198
mode 95 11.64 0.3917
mode 96 11.72 0.4592
mode 97 11.77 0.3990
mode 98 11.82 0.4526
mode 99 11.86 0.3813
mode 100 11.90 0.5425
mode 101 11.95 0.4188
mode 102 12.02 0.4491
mode 103 12.05 0.1695
mode 104 12.10 0.3228
mode 105 12.11 0.3172
mode 106 12.19 0.4175

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.