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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0788
ILE 4790.0299
PHE 4800.0224
ILE 4810.0230
SER 4820.0069
ASP 4830.0071
ASP 4840.0074
LYS 4850.0121
ASP 4860.0088
SER 4870.0097
LEU 4880.0089
LYS 4890.0177
CYS 4900.0153
PRO 4910.0114
CYS 4920.0104
ASP 4930.0093
PRO 4940.0077
GLU 4950.0017
MET 4960.0067
VAL 4970.0262
SER 4980.0220
GLN 4990.0242
SER 5000.0560
THR 5010.0184
CYS 5020.0214
ARG 5030.0069
PHE 5040.0057
PHE 5050.0036
VAL 5060.0051
CYS 5070.0070
LYS 5080.0095
CYS 5090.0101
VAL 5100.0107
GLU 5110.0147
ARG 5120.0168
SER 20.0056
VAL 30.0082
LEU 40.0119
SER 50.0153
GLN 60.0132
SER 70.0124
PRO 80.0153
ALA 90.0113
ILE 100.0074
LEU 110.0122
SER 120.0092
ALA 130.0086
SER 140.0129
PRO 150.0097
GLY 160.0106
GLU 170.0132
LYS 180.0188
VAL 190.0232
THR 200.0089
MET 210.0081
THR 220.0078
CYS 230.0123
ARG 240.0185
ALA 250.0243
ARG 260.0156
SER 270.0162
SER 290.0158
VAL 300.0129
SER 310.0115
TYR 320.0035
MET 330.0014
HIS 340.0013
TRP 350.0033
TYR 360.0046
GLN 370.0064
GLN 380.0126
LYS 390.0148
SER 400.0193
GLY 410.0448
SER 420.0294
SER 430.0102
PRO 440.0098
LYS 450.0081
PRO 460.0099
TRP 470.0090
ILE 480.0069
HIS 490.0058
ALA 500.0064
THR 510.0061
SER 520.0099
ASN 530.0152
LEU 540.0157
ALA 550.0208
SER 560.0377
GLY 570.0332
VAL 580.0192
PRO 590.0149
ALA 600.0075
ARG 610.0046
PHE 620.0063
SER 630.0081
GLY 640.0126
SER 650.0098
GLY 660.0040
SER 670.0031
GLY 680.0077
THR 690.0142
SER 700.0097
TYR 710.0027
SER 720.0035
LEU 730.0057
THR 740.0188
ILE 750.0140
SER 760.0153
ARG 770.0157
VAL 780.0090
GLU 790.0078
ALA 800.0069
GLU 810.0088
ASP 820.0092
ALA 830.0040
ALA 840.0074
THR 850.0108
TYR 860.0059
TYR 870.0068
CYS 880.0071
GLN 890.0036
GLN 900.0042
TRP 910.0043
SER 920.0039
SER 930.0065
HIS 940.0084
PRO 950.0073
PRO 960.0050
THR 970.0076
PHE 980.0076
GLY 990.0082
SER 1000.0092
GLY 1010.0103
THR 1020.0088
LYS 1030.0060
LEU 1040.0017
GLU 1050.0020
ILE 1060.0042
LYS 1070.0074
ARG 1080.0066
ALA 1090.0064
ASP 1100.0042
ALA 1110.0046
ALA 1120.0079
PRO 1130.0045
THR 1140.0057
VAL 1150.0095
SER 1160.0070
ILE 1170.0041
PHE 1180.0078
PRO 1190.0128
PRO 1200.0135
SER 1210.0134
SER 1220.0083
GLU 1230.0068
GLN 1240.0116
LEU 1250.0054
THR 1260.0272
SER 1270.0417
GLY 1280.0129
GLY 1290.0138
ALA 1300.0150
SER 1310.0075
VAL 1320.0040
VAL 1330.0022
CYS 1340.0068
PHE 1350.0028
LEU 1360.0050
ASN 1370.0039
ASN 1380.0039
PHE 1390.0037
TYR 1400.0055
PRO 1410.0054
LYS 1420.0091
ASP 1430.0097
ILE 1440.0075
ASN 1450.0156
VAL 1460.0219
LYS 1470.0168
TRP 1480.0148
LYS 1490.0098
ILE 1500.0106
ASP 1510.0163
GLY 1520.0788
SER 1530.0229
GLU 1540.0508
ARG 1550.0413
GLN 1560.0105
ASN 1570.0215
GLY 1580.0268
VAL 1590.0308
LEU 1600.0369
ASN 1610.0223
SER 1620.0180
TRP 1630.0162
THR 1640.0160
ASP 1650.0129
GLN 1660.0060
ASP 1670.0041
SER 1680.0080
LYS 1690.0157
ASP 1700.0068
SER 1710.0026
THR 1720.0062
TYR 1730.0050
SER 1740.0044
MET 1750.0054
SER 1760.0073
SER 1770.0134
THR 1780.0121
LEU 1790.0147
THR 1800.0144
LEU 1810.0136
THR 1820.0219
LYS 1830.0191
ASP 1840.0140
GLU 1850.0104
TYR 1860.0044
GLU 1870.0152
ARG 1880.0258
HIS 1890.0211
ASN 1900.0138
SER 1910.0157
TYR 1920.0157
THR 1930.0194
CYS 1940.0187
GLU 1950.0112
ALA 1960.0135
THR 1970.0181
HIS 1980.0137
LYS 1990.0127
THR 2000.0126
SER 2010.0267
THR 2020.0224
SER 2030.0588
PRO 2040.0315
ILE 2050.0104
VAL 2060.0117
LYS 2070.0120
SER 2080.0145
PHE 2090.0021
ASN 2100.0114
ARG 2110.0153
ASN 2120.0211
GLU 2130.0169
CYS 2140.0226
GLU 10.0163
VAL 20.0119
GLN 30.0062
LEU 40.0094
VAL 50.0115
GLU 60.0113
SER 70.0098
GLY 80.0077
GLY 90.0067
GLY 100.0157
LEU 110.0159
VAL 120.0207
LYS 130.0164
PRO 140.0140
GLY 150.0185
GLY 160.0168
SER 170.0132
LEU 180.0120
LYS 190.0035
LEU 200.0046
SER 210.0075
CYS 220.0119
ALA 230.0102
ALA 240.0094
SER 250.0073
GLY 260.0062
PHE 270.0054
ILE 280.0044
PHE 290.0006
SER 300.0043
ASP 310.0097
TYR 320.0060
TYR 330.0053
MET 340.0054
TYR 350.0038
TRP 360.0041
VAL 370.0042
ARG 380.0044
GLN 390.0044
THR 400.0052
PRO 410.0097
GLU 420.0080
LYS 430.0047
ARG 440.0030
LEU 450.0064
GLU 460.0066
TRP 470.0055
VAL 480.0066
ALA 490.0061
THR 500.0065
ILE 510.0117
SER 520.0155
ASP 520.0161
GLY 530.0249
ASN 540.0326
SER 550.0306
TYR 560.0243
THR 570.0184
TYR 580.0053
TYR 590.0087
VAL 600.0177
ASP 610.0330
SER 620.0391
VAL 630.0267
LYS 640.0155
GLY 650.0128
ARG 660.0162
PHE 670.0120
THR 680.0085
ILE 690.0105
SER 700.0160
ARG 710.0077
ASP 720.0018
ASN 730.0227
ALA 740.0415
LYS 750.0365
ASN 760.0079
ASN 770.0080
LEU 780.0106
TYR 790.0087
LEU 800.0060
GLN 810.0026
MET 820.0117
SER 820.0148
SER 820.0113
LEU 820.0079
LYS 830.0085
SER 840.0163
GLU 850.0153
ASP 860.0060
THR 870.0117
ALA 880.0037
ILE 890.0020
TYR 900.0024
TYR 910.0054
CYS 920.0064
ALA 930.0048
ARG 940.0077
ASP 950.0069
GLY 960.0082
PRO 970.0177
THR 980.0280
ASP 990.0280
SER 1000.0020
SER 1000.0022
GLY 1000.0023
TYR 1000.0032
GLY 1000.0045
GLY 1000.0043
PHE 1000.0051
GLY 1010.0044
TYR 1020.0058
TRP 1030.0048
GLY 1040.0087
GLN 1050.0118
GLY 1060.0094
THR 1070.0029
LEU 1080.0053
VAL 1090.0134
THR 1100.0184
VAL 1110.0212
SER 1120.0137
GLU 1130.0128
ALA 1140.0118
LYS 1150.0292
THR 1160.0197
THR 1170.0084
PRO 1180.0080
PRO 1190.0085
SER 1200.0089
VAL 1210.0168
TYR 1220.0145
PRO 1230.0112
LEU 1240.0160
ALA 1250.0161
PRO 1260.0158
GLY 1270.0192
SER 1280.0268
ALA 1290.0513
ALA 1300.0260
GLN 1330.0140
THR 1340.0236
ASN 1350.0066
SER 1360.0314
MET 1370.0211
VAL 1380.0072
THR 1390.0065
LEU 1400.0077
GLY 1410.0084
CYS 1420.0085
LEU 1430.0082
VAL 1440.0082
LYS 1450.0022
GLY 1460.0011
TYR 1470.0036
PHE 1480.0078
PRO 1490.0060
GLU 1500.0034
PRO 1510.0137
VAL 1520.0088
THR 1530.0094
VAL 1540.0083
THR 1560.0084
TRP 1570.0085
ASN 1620.0076
SER 1630.0078
GLY 1640.0089
SER 1650.0118
LEU 1660.0108
SER 1670.0052
SER 1680.0290
GLY 1690.0122
VAL 1710.0116
HIS 1720.0102
THR 1730.0127
PHE 1740.0138
PRO 1750.0181
ALA 1760.0162
VAL 1770.0250
LEU 1780.0307
GLN 1790.0409
SER 1800.0572
ASP 1830.0234
LEU 1840.0190
TYR 1850.0145
THR 1860.0103
LEU 1870.0088
SER 1880.0064
SER 1890.0100
SER 1900.0095
VAL 1910.0087
THR 1920.0056
VAL 1930.0023
PRO 1940.0023
SER 1950.0158
SER 1960.0189
PRO 1980.0051
ARG 1990.0073
PRO 2000.0109
SER 2020.0088
GLU 2030.0041
THR 2040.0095
VAL 2050.0085
THR 2060.0048
CYS 2080.0017
ASN 2090.0028
VAL 2100.0078
ALA 2110.0085
HIS 2120.0103
PRO 2130.0169
ALA 2140.0231
SER 2150.0252
SER 2160.0228
THR 2170.0271
LYS 2180.0244
VAL 2190.0320
ASP 2200.0180
LYS 2210.0097
LYS 2220.0062
ILE 2230.0037
VAL 2260.0121
PRO 2270.0139
ARG 2280.0105
ASP 2320.0306
CYS 2330.0280

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.