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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0572
ILE 4790.0223
PHE 4800.0131
ILE 4810.0106
SER 4820.0056
ASP 4830.0162
ASP 4840.0221
LYS 4850.0148
ASP 4860.0198
SER 4870.0230
LEU 4880.0127
LYS 4890.0118
CYS 4900.0104
PRO 4910.0058
CYS 4920.0069
ASP 4930.0083
PRO 4940.0092
GLU 4950.0088
MET 4960.0076
VAL 4970.0113
SER 4980.0074
GLN 4990.0012
SER 5000.0159
THR 5010.0150
CYS 5020.0141
ARG 5030.0145
PHE 5040.0123
PHE 5050.0084
VAL 5060.0054
CYS 5070.0064
LYS 5080.0051
CYS 5090.0084
VAL 5100.0110
GLU 5110.0081
ARG 5120.0103
SER 20.0054
VAL 30.0044
LEU 40.0048
SER 50.0046
GLN 60.0059
SER 70.0112
PRO 80.0189
ALA 90.0180
ILE 100.0225
LEU 110.0290
SER 120.0269
ALA 130.0253
SER 140.0206
PRO 150.0173
GLY 160.0162
GLU 170.0212
LYS 180.0218
VAL 190.0193
THR 200.0172
MET 210.0136
THR 220.0116
CYS 230.0090
ARG 240.0081
ALA 250.0046
ARG 260.0033
SER 270.0010
SER 290.0040
VAL 300.0052
SER 310.0080
TYR 320.0094
MET 330.0082
HIS 340.0080
TRP 350.0063
TYR 360.0041
GLN 370.0048
GLN 380.0099
LYS 390.0229
SER 400.0318
GLY 410.0458
SER 420.0292
SER 430.0172
PRO 440.0071
LYS 450.0034
PRO 460.0048
TRP 470.0093
ILE 480.0091
HIS 490.0090
ALA 500.0109
THR 510.0103
SER 520.0139
ASN 530.0131
LEU 540.0142
ALA 550.0134
SER 560.0248
GLY 570.0272
VAL 580.0219
PRO 590.0144
ALA 600.0153
ARG 610.0145
PHE 620.0126
SER 630.0112
GLY 640.0098
SER 650.0113
GLY 660.0090
SER 670.0087
GLY 680.0078
THR 690.0099
SER 700.0108
TYR 710.0070
SER 720.0080
LEU 730.0088
THR 740.0121
ILE 750.0145
SER 760.0172
ARG 770.0107
VAL 780.0095
GLU 790.0120
ALA 800.0216
GLU 810.0261
ASP 820.0271
ALA 830.0242
ALA 840.0173
THR 850.0122
TYR 860.0070
TYR 870.0067
CYS 880.0072
GLN 890.0059
GLN 900.0064
TRP 910.0071
SER 920.0094
SER 930.0082
HIS 940.0068
PRO 950.0082
PRO 960.0057
THR 970.0026
PHE 980.0065
GLY 990.0086
SER 1000.0091
GLY 1010.0059
THR 1020.0046
LYS 1030.0083
LEU 1040.0186
GLU 1050.0147
ILE 1060.0140
LYS 1070.0230
ARG 1080.0207
ALA 1090.0266
ASP 1100.0043
ALA 1110.0108
ALA 1120.0148
PRO 1130.0039
THR 1140.0038
VAL 1150.0038
SER 1160.0068
ILE 1170.0076
PHE 1180.0082
PRO 1190.0173
PRO 1200.0186
SER 1210.0178
SER 1220.0204
GLU 1230.0139
GLN 1240.0131
LEU 1250.0161
THR 1260.0144
SER 1270.0058
GLY 1280.0033
GLY 1290.0114
ALA 1300.0143
SER 1310.0100
VAL 1320.0079
VAL 1330.0065
CYS 1340.0049
PHE 1350.0033
LEU 1360.0027
ASN 1370.0079
ASN 1380.0093
PHE 1390.0106
TYR 1400.0079
PRO 1410.0089
LYS 1420.0137
ASP 1430.0215
ILE 1440.0075
ASN 1450.0083
VAL 1460.0093
LYS 1470.0113
TRP 1480.0127
LYS 1490.0097
ILE 1500.0085
ASP 1510.0069
GLY 1520.0179
SER 1530.0103
GLU 1540.0221
ARG 1550.0203
GLN 1560.0173
ASN 1570.0202
GLY 1580.0112
VAL 1590.0165
LEU 1600.0237
ASN 1610.0208
SER 1620.0171
TRP 1630.0122
THR 1640.0127
ASP 1650.0142
GLN 1660.0101
ASP 1670.0144
SER 1680.0423
LYS 1690.0572
ASP 1700.0237
SER 1710.0125
THR 1720.0210
TYR 1730.0121
SER 1740.0075
MET 1750.0079
SER 1760.0118
SER 1770.0122
THR 1780.0128
LEU 1790.0109
THR 1800.0103
LEU 1810.0125
THR 1820.0242
LYS 1830.0071
ASP 1840.0182
GLU 1850.0084
TYR 1860.0116
GLU 1870.0139
ARG 1880.0032
HIS 1890.0058
ASN 1900.0117
SER 1910.0068
TYR 1920.0094
THR 1930.0115
CYS 1940.0091
GLU 1950.0081
ALA 1960.0077
THR 1970.0123
HIS 1980.0176
LYS 1990.0379
THR 2000.0334
SER 2010.0183
THR 2020.0157
SER 2030.0261
PRO 2040.0101
ILE 2050.0132
VAL 2060.0139
LYS 2070.0139
SER 2080.0141
PHE 2090.0131
ASN 2100.0132
ARG 2110.0181
ASN 2120.0283
GLU 2130.0276
CYS 2140.0354
GLU 10.0325
VAL 20.0329
GLN 30.0450
LEU 40.0203
VAL 50.0226
GLU 60.0142
SER 70.0225
GLY 80.0248
GLY 90.0162
GLY 100.0073
LEU 110.0077
VAL 120.0077
LYS 130.0099
PRO 140.0072
GLY 150.0095
GLY 160.0140
SER 170.0158
LEU 180.0172
LYS 190.0181
LEU 200.0141
SER 210.0128
CYS 220.0090
ALA 230.0164
ALA 240.0209
SER 250.0335
GLY 260.0294
PHE 270.0299
ILE 280.0295
PHE 290.0239
SER 300.0202
ASP 310.0236
TYR 320.0145
TYR 330.0098
MET 340.0051
TYR 350.0058
TRP 360.0052
VAL 370.0093
ARG 380.0102
GLN 390.0107
THR 400.0168
PRO 410.0258
GLU 420.0286
LYS 430.0207
ARG 440.0145
LEU 450.0093
GLU 460.0081
TRP 470.0067
VAL 480.0094
ALA 490.0072
THR 500.0096
ILE 510.0133
SER 520.0144
ASP 520.0227
GLY 530.0262
ASN 540.0302
SER 550.0267
TYR 560.0214
THR 570.0168
TYR 580.0096
TYR 590.0100
VAL 600.0122
ASP 610.0159
SER 620.0192
VAL 630.0161
LYS 640.0096
GLY 650.0091
ARG 660.0122
PHE 670.0042
THR 680.0039
ILE 690.0042
SER 700.0122
ARG 710.0078
ASP 720.0095
ASN 730.0289
ALA 740.0537
LYS 750.0388
ASN 760.0064
ASN 770.0074
LEU 780.0078
TYR 790.0053
LEU 800.0049
GLN 810.0093
MET 820.0089
SER 820.0085
SER 820.0081
LEU 820.0075
LYS 830.0089
SER 840.0095
GLU 850.0072
ASP 860.0037
THR 870.0119
ALA 880.0094
ILE 890.0080
TYR 900.0082
TYR 910.0094
CYS 920.0077
ALA 930.0079
ARG 940.0054
ASP 950.0077
GLY 960.0105
PRO 970.0394
THR 980.0523
ASP 990.0531
SER 1000.0095
SER 1000.0078
GLY 1000.0072
TYR 1000.0046
GLY 1000.0031
GLY 1000.0033
PHE 1000.0070
GLY 1010.0094
TYR 1020.0133
TRP 1030.0078
GLY 1040.0082
GLN 1050.0124
GLY 1060.0142
THR 1070.0100
LEU 1080.0064
VAL 1090.0041
THR 1100.0056
VAL 1110.0067
SER 1120.0112
GLU 1130.0103
ALA 1140.0132
LYS 1150.0162
THR 1160.0059
THR 1170.0072
PRO 1180.0116
PRO 1190.0087
SER 1200.0077
VAL 1210.0022
TYR 1220.0047
PRO 1230.0029
LEU 1240.0034
ALA 1250.0068
PRO 1260.0113
GLY 1270.0204
SER 1280.0077
ALA 1290.0097
ALA 1300.0197
GLN 1330.0094
THR 1340.0131
ASN 1350.0045
SER 1360.0131
MET 1370.0085
VAL 1380.0055
THR 1390.0053
LEU 1400.0054
GLY 1410.0060
CYS 1420.0050
LEU 1430.0043
VAL 1440.0051
LYS 1450.0056
GLY 1460.0072
TYR 1470.0068
PHE 1480.0054
PRO 1490.0055
GLU 1500.0065
PRO 1510.0092
VAL 1520.0087
THR 1530.0112
VAL 1540.0097
THR 1560.0093
TRP 1570.0099
ASN 1620.0083
SER 1630.0043
GLY 1640.0135
SER 1650.0298
LEU 1660.0128
SER 1670.0197
SER 1680.0108
GLY 1690.0143
VAL 1710.0157
HIS 1720.0093
THR 1730.0115
PHE 1740.0148
PRO 1750.0205
ALA 1760.0186
VAL 1770.0140
LEU 1780.0063
GLN 1790.0234
SER 1800.0109
ASP 1830.0086
LEU 1840.0080
TYR 1850.0082
THR 1860.0136
LEU 1870.0131
SER 1880.0124
SER 1890.0096
SER 1900.0096
VAL 1910.0111
THR 1920.0085
VAL 1930.0051
PRO 1940.0031
SER 1950.0070
SER 1960.0055
PRO 1980.0046
ARG 1990.0034
PRO 2000.0032
SER 2020.0099
GLU 2030.0045
THR 2040.0090
VAL 2050.0114
THR 2060.0126
CYS 2080.0121
ASN 2090.0060
VAL 2100.0085
ALA 2110.0175
HIS 2120.0143
PRO 2130.0132
ALA 2140.0102
SER 2150.0147
SER 2160.0186
THR 2170.0176
LYS 2180.0181
VAL 2190.0057
ASP 2200.0068
LYS 2210.0060
LYS 2220.0092
ILE 2230.0054
VAL 2260.0090
PRO 2270.0137
ARG 2280.0179
ASP 2320.0197
CYS 2330.0086

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.