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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0702
ILE 4790.0409
PHE 4800.0155
ILE 4810.0264
SER 4820.0100
ASP 4830.0110
ASP 4840.0116
LYS 4850.0112
ASP 4860.0115
SER 4870.0120
LEU 4880.0071
LYS 4890.0062
CYS 4900.0054
PRO 4910.0051
CYS 4920.0055
ASP 4930.0060
PRO 4940.0077
GLU 4950.0043
MET 4960.0055
VAL 4970.0172
SER 4980.0168
GLN 4990.0197
SER 5000.0475
THR 5010.0073
CYS 5020.0190
ARG 5030.0167
PHE 5040.0109
PHE 5050.0090
VAL 5060.0107
CYS 5070.0073
LYS 5080.0058
CYS 5090.0112
VAL 5100.0197
GLU 5110.0207
ARG 5120.0285
SER 20.0060
VAL 30.0163
LEU 40.0203
SER 50.0293
GLN 60.0230
SER 70.0224
PRO 80.0307
ALA 90.0223
ILE 100.0180
LEU 110.0216
SER 120.0224
ALA 130.0230
SER 140.0218
PRO 150.0130
GLY 160.0178
GLU 170.0185
LYS 180.0180
VAL 190.0229
THR 200.0135
MET 210.0091
THR 220.0124
CYS 230.0150
ARG 240.0170
ALA 250.0202
ARG 260.0228
SER 270.0391
SER 290.0144
VAL 300.0073
SER 310.0023
TYR 320.0009
MET 330.0029
HIS 340.0046
TRP 350.0050
TYR 360.0060
GLN 370.0082
GLN 380.0102
LYS 390.0110
SER 400.0106
GLY 410.0202
SER 420.0109
SER 430.0035
PRO 440.0074
LYS 450.0116
PRO 460.0103
TRP 470.0162
ILE 480.0117
HIS 490.0080
ALA 500.0059
THR 510.0081
SER 520.0124
ASN 530.0134
LEU 540.0166
ALA 550.0190
SER 560.0350
GLY 570.0308
VAL 580.0269
PRO 590.0136
ALA 600.0184
ARG 610.0145
PHE 620.0170
SER 630.0164
GLY 640.0183
SER 650.0153
GLY 660.0177
SER 670.0174
GLY 680.0157
THR 690.0150
SER 700.0155
TYR 710.0122
SER 720.0111
LEU 730.0105
THR 740.0198
ILE 750.0146
SER 760.0110
ARG 770.0150
VAL 780.0065
GLU 790.0178
ALA 800.0178
GLU 810.0165
ASP 820.0154
ALA 830.0105
ALA 840.0096
THR 850.0077
TYR 860.0037
TYR 870.0062
CYS 880.0091
GLN 890.0085
GLN 900.0072
TRP 910.0065
SER 920.0138
SER 930.0144
HIS 940.0090
PRO 950.0090
PRO 960.0091
THR 970.0130
PHE 980.0150
GLY 990.0150
SER 1000.0157
GLY 1010.0156
THR 1020.0119
LYS 1030.0050
LEU 1040.0058
GLU 1050.0077
ILE 1060.0078
LYS 1070.0168
ARG 1080.0227
ALA 1090.0328
ASP 1100.0106
ALA 1110.0118
ALA 1120.0183
PRO 1130.0168
THR 1140.0260
VAL 1150.0258
SER 1160.0191
ILE 1170.0167
PHE 1180.0120
PRO 1190.0102
PRO 1200.0117
SER 1210.0113
SER 1220.0128
GLU 1230.0142
GLN 1240.0147
LEU 1250.0132
THR 1260.0193
SER 1270.0280
GLY 1280.0174
GLY 1290.0173
ALA 1300.0114
SER 1310.0074
VAL 1320.0043
VAL 1330.0044
CYS 1340.0141
PHE 1350.0120
LEU 1360.0123
ASN 1370.0093
ASN 1380.0104
PHE 1390.0068
TYR 1400.0031
PRO 1410.0032
LYS 1420.0072
ASP 1430.0116
ILE 1440.0104
ASN 1450.0088
VAL 1460.0025
LYS 1470.0030
TRP 1480.0058
LYS 1490.0193
ILE 1500.0219
ASP 1510.0189
GLY 1520.0421
SER 1530.0105
GLU 1540.0416
ARG 1550.0156
GLN 1560.0021
ASN 1570.0182
GLY 1580.0102
VAL 1590.0132
LEU 1600.0154
ASN 1610.0262
SER 1620.0227
TRP 1630.0215
THR 1640.0158
ASP 1650.0188
GLN 1660.0158
ASP 1670.0287
SER 1680.0333
LYS 1690.0547
ASP 1700.0261
SER 1710.0195
THR 1720.0173
TYR 1730.0056
SER 1740.0034
MET 1750.0106
SER 1760.0143
SER 1770.0135
THR 1780.0110
LEU 1790.0141
THR 1800.0141
LEU 1810.0146
THR 1820.0426
LYS 1830.0242
ASP 1840.0337
GLU 1850.0142
TYR 1860.0088
GLU 1870.0094
ARG 1880.0129
HIS 1890.0150
ASN 1900.0156
SER 1910.0165
TYR 1920.0172
THR 1930.0203
CYS 1940.0201
GLU 1950.0149
ALA 1960.0147
THR 1970.0177
HIS 1980.0184
LYS 1990.0225
THR 2000.0342
SER 2010.0109
THR 2020.0359
SER 2030.0228
PRO 2040.0190
ILE 2050.0202
VAL 2060.0273
LYS 2070.0242
SER 2080.0231
PHE 2090.0038
ASN 2100.0067
ARG 2110.0134
ASN 2120.0405
GLU 2130.0340
CYS 2140.0318
GLU 10.0090
VAL 20.0117
GLN 30.0147
LEU 40.0090
VAL 50.0084
GLU 60.0069
SER 70.0080
GLY 80.0100
GLY 90.0121
GLY 100.0093
LEU 110.0052
VAL 120.0069
LYS 130.0069
PRO 140.0079
GLY 150.0110
GLY 160.0081
SER 170.0106
LEU 180.0156
LYS 190.0067
LEU 200.0064
SER 210.0054
CYS 220.0078
ALA 230.0066
ALA 240.0063
SER 250.0072
GLY 260.0087
PHE 270.0090
ILE 280.0064
PHE 290.0071
SER 300.0076
ASP 310.0018
TYR 320.0031
TYR 330.0039
MET 340.0021
TYR 350.0020
TRP 360.0022
VAL 370.0067
ARG 380.0066
GLN 390.0061
THR 400.0132
PRO 410.0133
GLU 420.0128
LYS 430.0107
ARG 440.0111
LEU 450.0111
GLU 460.0095
TRP 470.0085
VAL 480.0082
ALA 490.0073
THR 500.0048
ILE 510.0035
SER 520.0049
ASP 520.0080
GLY 530.0148
ASN 540.0164
SER 550.0092
TYR 560.0108
THR 570.0093
TYR 580.0064
TYR 590.0078
VAL 600.0084
ASP 610.0123
SER 620.0100
VAL 630.0068
LYS 640.0085
GLY 650.0100
ARG 660.0070
PHE 670.0022
THR 680.0037
ILE 690.0057
SER 700.0134
ARG 710.0096
ASP 720.0090
ASN 730.0154
ALA 740.0207
LYS 750.0113
ASN 760.0036
ASN 770.0047
LEU 780.0069
TYR 790.0068
LEU 800.0061
GLN 810.0038
MET 820.0108
SER 820.0085
SER 820.0066
LEU 820.0066
LYS 830.0065
SER 840.0064
GLU 850.0125
ASP 860.0109
THR 870.0093
ALA 880.0068
ILE 890.0063
TYR 900.0062
TYR 910.0037
CYS 920.0044
ALA 930.0037
ARG 940.0027
ASP 950.0033
GLY 960.0017
PRO 970.0114
THR 980.0236
ASP 990.0231
SER 1000.0025
SER 1000.0027
GLY 1000.0042
TYR 1000.0046
GLY 1000.0052
GLY 1000.0039
PHE 1000.0040
GLY 1010.0028
TYR 1020.0040
TRP 1030.0044
GLY 1040.0032
GLN 1050.0026
GLY 1060.0059
THR 1070.0065
LEU 1080.0078
VAL 1090.0102
THR 1100.0066
VAL 1110.0039
SER 1120.0087
GLU 1130.0136
ALA 1140.0163
LYS 1150.0196
THR 1160.0125
THR 1170.0109
PRO 1180.0055
PRO 1190.0067
SER 1200.0070
VAL 1210.0026
TYR 1220.0025
PRO 1230.0034
LEU 1240.0083
ALA 1250.0116
PRO 1260.0133
GLY 1270.0177
SER 1280.0335
ALA 1290.0702
ALA 1300.0175
GLN 1330.0229
THR 1340.0083
ASN 1350.0130
SER 1360.0137
MET 1370.0062
VAL 1380.0089
THR 1390.0100
LEU 1400.0065
GLY 1410.0064
CYS 1420.0052
LEU 1430.0042
VAL 1440.0026
LYS 1450.0046
GLY 1460.0041
TYR 1470.0050
PHE 1480.0068
PRO 1490.0073
GLU 1500.0076
PRO 1510.0069
VAL 1520.0071
THR 1530.0126
VAL 1540.0077
THR 1560.0044
TRP 1570.0052
ASN 1620.0092
SER 1630.0179
GLY 1640.0192
SER 1650.0074
LEU 1660.0065
SER 1670.0099
SER 1680.0108
GLY 1690.0136
VAL 1710.0095
HIS 1720.0076
THR 1730.0116
PHE 1740.0135
PRO 1750.0199
ALA 1760.0211
VAL 1770.0201
LEU 1780.0114
GLN 1790.0209
SER 1800.0126
ASP 1830.0137
LEU 1840.0085
TYR 1850.0089
THR 1860.0110
LEU 1870.0096
SER 1880.0088
SER 1890.0051
SER 1900.0051
VAL 1910.0082
THR 1920.0124
VAL 1930.0093
PRO 1940.0064
SER 1950.0086
SER 1960.0099
PRO 1980.0098
ARG 1990.0097
PRO 2000.0114
SER 2020.0065
GLU 2030.0127
THR 2040.0167
VAL 2050.0091
THR 2060.0072
CYS 2080.0087
ASN 2090.0088
VAL 2100.0090
ALA 2110.0153
HIS 2120.0083
PRO 2130.0160
ALA 2140.0124
SER 2150.0123
SER 2160.0191
THR 2170.0148
LYS 2180.0207
VAL 2190.0272
ASP 2200.0095
LYS 2210.0099
LYS 2220.0087
ILE 2230.0065
VAL 2260.0169
PRO 2270.0191
ARG 2280.0182
ASP 2320.0235
CYS 2330.0218

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.