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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1276
ILE 4790.0728
PHE 4800.0297
ILE 4810.0658
SER 4820.0347
ASP 4830.0048
ASP 4840.0324
LYS 4850.0420
ASP 4860.0399
SER 4870.0438
LEU 4880.0328
LYS 4890.0196
CYS 4900.0117
PRO 4910.0144
CYS 4920.0107
ASP 4930.0139
PRO 4940.0264
GLU 4950.0288
MET 4960.0214
VAL 4970.0517
SER 4980.0495
GLN 4990.0715
SER 5000.1276
THR 5010.0377
CYS 5020.0467
ARG 5030.0451
PHE 5040.0213
PHE 5050.0304
VAL 5060.0324
CYS 5070.0197
LYS 5080.0157
CYS 5090.0196
VAL 5100.0269
GLU 5110.0350
ARG 5120.0293
SER 20.0119
VAL 30.0114
LEU 40.0049
SER 50.0144
GLN 60.0101
SER 70.0114
PRO 80.0136
ALA 90.0129
ILE 100.0125
LEU 110.0072
SER 120.0065
ALA 130.0045
SER 140.0101
PRO 150.0147
GLY 160.0144
GLU 170.0048
LYS 180.0060
VAL 190.0104
THR 200.0090
MET 210.0064
THR 220.0029
CYS 230.0106
ARG 240.0182
ALA 250.0131
ARG 260.0140
SER 270.0212
SER 290.0138
VAL 300.0080
SER 310.0056
TYR 320.0061
MET 330.0042
HIS 340.0053
TRP 350.0036
TYR 360.0027
GLN 370.0028
GLN 380.0037
LYS 390.0100
SER 400.0142
GLY 410.0171
SER 420.0119
SER 430.0076
PRO 440.0039
LYS 450.0032
PRO 460.0020
TRP 470.0040
ILE 480.0060
HIS 490.0063
ALA 500.0097
THR 510.0090
SER 520.0131
ASN 530.0107
LEU 540.0053
ALA 550.0072
SER 560.0286
GLY 570.0306
VAL 580.0195
PRO 590.0148
ALA 600.0182
ARG 610.0156
PHE 620.0097
SER 630.0100
GLY 640.0126
SER 650.0092
GLY 660.0086
SER 670.0226
GLY 680.0251
THR 690.0239
SER 700.0225
TYR 710.0039
SER 720.0020
LEU 730.0039
THR 740.0113
ILE 750.0092
SER 760.0069
ARG 770.0106
VAL 780.0137
GLU 790.0204
ALA 800.0127
GLU 810.0135
ASP 820.0130
ALA 830.0103
ALA 840.0074
THR 850.0028
TYR 860.0041
TYR 870.0040
CYS 880.0051
GLN 890.0048
GLN 900.0056
TRP 910.0075
SER 920.0112
SER 930.0140
HIS 940.0185
PRO 950.0156
PRO 960.0112
THR 970.0102
PHE 980.0068
GLY 990.0095
SER 1000.0125
GLY 1010.0085
THR 1020.0077
LYS 1030.0053
LEU 1040.0040
GLU 1050.0047
ILE 1060.0039
LYS 1070.0126
ARG 1080.0149
ALA 1090.0180
ASP 1100.0015
ALA 1110.0048
ALA 1120.0090
PRO 1130.0070
THR 1140.0096
VAL 1150.0082
SER 1160.0093
ILE 1170.0090
PHE 1180.0082
PRO 1190.0060
PRO 1200.0052
SER 1210.0041
SER 1220.0086
GLU 1230.0072
GLN 1240.0060
LEU 1250.0063
THR 1260.0087
SER 1270.0119
GLY 1280.0039
GLY 1290.0050
ALA 1300.0044
SER 1310.0045
VAL 1320.0045
VAL 1330.0051
CYS 1340.0057
PHE 1350.0043
LEU 1360.0041
ASN 1370.0042
ASN 1380.0049
PHE 1390.0033
TYR 1400.0032
PRO 1410.0036
LYS 1420.0021
ASP 1430.0025
ILE 1440.0033
ASN 1450.0046
VAL 1460.0013
LYS 1470.0003
TRP 1480.0022
LYS 1490.0017
ILE 1500.0030
ASP 1510.0042
GLY 1520.0085
SER 1530.0029
GLU 1540.0077
ARG 1550.0062
GLN 1560.0026
ASN 1570.0113
GLY 1580.0121
VAL 1590.0146
LEU 1600.0195
ASN 1610.0130
SER 1620.0089
TRP 1630.0096
THR 1640.0072
ASP 1650.0074
GLN 1660.0041
ASP 1670.0145
SER 1680.0167
LYS 1690.0214
ASP 1700.0113
SER 1710.0051
THR 1720.0080
TYR 1730.0029
SER 1740.0022
MET 1750.0014
SER 1760.0045
SER 1770.0072
THR 1780.0100
LEU 1790.0090
THR 1800.0077
LEU 1810.0054
THR 1820.0134
LYS 1830.0065
ASP 1840.0099
GLU 1850.0068
TYR 1860.0050
GLU 1870.0015
ARG 1880.0016
HIS 1890.0050
ASN 1900.0086
SER 1910.0057
TYR 1920.0058
THR 1930.0054
CYS 1940.0055
GLU 1950.0028
ALA 1960.0050
THR 1970.0093
HIS 1980.0091
LYS 1990.0103
THR 2000.0185
SER 2010.0079
THR 2020.0187
SER 2030.0158
PRO 2040.0041
ILE 2050.0057
VAL 2060.0081
LYS 2070.0086
SER 2080.0088
PHE 2090.0062
ASN 2100.0074
ARG 2110.0099
ASN 2120.0177
GLU 2130.0128
CYS 2140.0101
GLU 10.0144
VAL 20.0191
GLN 30.0289
LEU 40.0102
VAL 50.0077
GLU 60.0036
SER 70.0069
GLY 80.0099
GLY 90.0092
GLY 100.0120
LEU 110.0128
VAL 120.0147
LYS 130.0135
PRO 140.0153
GLY 150.0137
GLY 160.0144
SER 170.0131
LEU 180.0135
LYS 190.0073
LEU 200.0049
SER 210.0037
CYS 220.0029
ALA 230.0047
ALA 240.0071
SER 250.0129
GLY 260.0188
PHE 270.0194
ILE 280.0199
PHE 290.0093
SER 300.0093
ASP 310.0069
TYR 320.0046
TYR 330.0089
MET 340.0050
TYR 350.0037
TRP 360.0023
VAL 370.0061
ARG 380.0072
GLN 390.0072
THR 400.0142
PRO 410.0152
GLU 420.0130
LYS 430.0095
ARG 440.0160
LEU 450.0113
GLU 460.0040
TRP 470.0061
VAL 480.0087
ALA 490.0105
THR 500.0083
ILE 510.0072
SER 520.0104
ASP 520.0144
GLY 530.0176
ASN 540.0122
SER 550.0133
TYR 560.0176
THR 570.0188
TYR 580.0148
TYR 590.0122
VAL 600.0107
ASP 610.0130
SER 620.0118
VAL 630.0043
LYS 640.0019
GLY 650.0058
ARG 660.0086
PHE 670.0045
THR 680.0056
ILE 690.0069
SER 700.0061
ARG 710.0035
ASP 720.0081
ASN 730.0018
ALA 740.0244
LYS 750.0285
ASN 760.0026
ASN 770.0016
LEU 780.0006
TYR 790.0029
LEU 800.0030
GLN 810.0042
MET 820.0065
SER 820.0078
SER 820.0062
LEU 820.0026
LYS 830.0017
SER 840.0043
GLU 850.0091
ASP 860.0066
THR 870.0030
ALA 880.0052
ILE 890.0046
TYR 900.0045
TYR 910.0025
CYS 920.0018
ALA 930.0018
ARG 940.0050
ASP 950.0051
GLY 960.0054
PRO 970.0297
THR 980.0384
ASP 990.0243
SER 1000.0036
SER 1000.0052
GLY 1000.0082
TYR 1000.0091
GLY 1000.0085
GLY 1000.0062
PHE 1000.0036
GLY 1010.0022
TYR 1020.0035
TRP 1030.0034
GLY 1040.0036
GLN 1050.0051
GLY 1060.0036
THR 1070.0034
LEU 1080.0037
VAL 1090.0100
THR 1100.0117
VAL 1110.0120
SER 1120.0198
GLU 1130.0188
ALA 1140.0141
LYS 1150.0122
THR 1160.0033
THR 1170.0058
PRO 1180.0021
PRO 1190.0021
SER 1200.0013
VAL 1210.0026
TYR 1220.0017
PRO 1230.0015
LEU 1240.0046
ALA 1250.0048
PRO 1260.0053
GLY 1270.0052
SER 1280.0067
ALA 1290.0154
ALA 1300.0076
GLN 1330.0062
THR 1340.0017
ASN 1350.0046
SER 1360.0022
MET 1370.0009
VAL 1380.0025
THR 1390.0051
LEU 1400.0029
GLY 1410.0019
CYS 1420.0012
LEU 1430.0014
VAL 1440.0021
LYS 1450.0037
GLY 1460.0050
TYR 1470.0047
PHE 1480.0024
PRO 1490.0024
GLU 1500.0030
PRO 1510.0041
VAL 1520.0035
THR 1530.0048
VAL 1540.0034
THR 1560.0028
TRP 1570.0025
ASN 1620.0041
SER 1630.0081
GLY 1640.0083
SER 1650.0015
LEU 1660.0020
SER 1670.0056
SER 1680.0052
GLY 1690.0038
VAL 1710.0083
HIS 1720.0067
THR 1730.0061
PHE 1740.0042
PRO 1750.0081
ALA 1760.0074
VAL 1770.0112
LEU 1780.0077
GLN 1790.0090
SER 1800.0214
ASP 1830.0288
LEU 1840.0184
TYR 1850.0061
THR 1860.0044
LEU 1870.0034
SER 1880.0036
SER 1890.0024
SER 1900.0029
VAL 1910.0042
THR 1920.0036
VAL 1930.0022
PRO 1940.0011
SER 1950.0013
SER 1960.0027
PRO 1980.0014
ARG 1990.0029
PRO 2000.0044
SER 2020.0020
GLU 2030.0017
THR 2040.0046
VAL 2050.0016
THR 2060.0011
CYS 2080.0014
ASN 2090.0007
VAL 2100.0014
ALA 2110.0039
HIS 2120.0030
PRO 2130.0045
ALA 2140.0052
SER 2150.0039
SER 2160.0040
THR 2170.0064
LYS 2180.0081
VAL 2190.0088
ASP 2200.0016
LYS 2210.0012
LYS 2220.0019
ILE 2230.0031
VAL 2260.0049
PRO 2270.0053
ARG 2280.0035
ASP 2320.0062
CYS 2330.0078

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.