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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0674
ILE 4790.0094
PHE 4800.0097
ILE 4810.0072
SER 4820.0044
ASP 4830.0082
ASP 4840.0134
LYS 4850.0086
ASP 4860.0123
SER 4870.0154
LEU 4880.0085
LYS 4890.0088
CYS 4900.0066
PRO 4910.0024
CYS 4920.0018
ASP 4930.0020
PRO 4940.0048
GLU 4950.0046
MET 4960.0038
VAL 4970.0090
SER 4980.0082
GLN 4990.0121
SER 5000.0185
THR 5010.0132
CYS 5020.0113
ARG 5030.0048
PHE 5040.0037
PHE 5050.0040
VAL 5060.0044
CYS 5070.0046
LYS 5080.0054
CYS 5090.0042
VAL 5100.0025
GLU 5110.0017
ARG 5120.0139
SER 20.0052
VAL 30.0063
LEU 40.0087
SER 50.0094
GLN 60.0026
SER 70.0084
PRO 80.0343
ALA 90.0407
ILE 100.0412
LEU 110.0073
SER 120.0028
ALA 130.0144
SER 140.0200
PRO 150.0109
GLY 160.0144
GLU 170.0246
LYS 180.0201
VAL 190.0239
THR 200.0076
MET 210.0047
THR 220.0054
CYS 230.0086
ARG 240.0140
ALA 250.0196
ARG 260.0160
SER 270.0189
SER 290.0129
VAL 300.0133
SER 310.0150
TYR 320.0055
MET 330.0036
HIS 340.0031
TRP 350.0029
TYR 360.0028
GLN 370.0035
GLN 380.0044
LYS 390.0065
SER 400.0077
GLY 410.0068
SER 420.0041
SER 430.0027
PRO 440.0021
LYS 450.0021
PRO 460.0042
TRP 470.0034
ILE 480.0016
HIS 490.0031
ALA 500.0041
THR 510.0047
SER 520.0036
ASN 530.0096
LEU 540.0105
ALA 550.0112
SER 560.0421
GLY 570.0173
VAL 580.0214
PRO 590.0235
ALA 600.0200
ARG 610.0112
PHE 620.0083
SER 630.0040
GLY 640.0019
SER 650.0098
GLY 660.0119
SER 670.0136
GLY 680.0085
THR 690.0108
SER 700.0111
TYR 710.0061
SER 720.0075
LEU 730.0070
THR 740.0102
ILE 750.0065
SER 760.0108
ARG 770.0139
VAL 780.0100
GLU 790.0105
ALA 800.0150
GLU 810.0167
ASP 820.0154
ALA 830.0074
ALA 840.0047
THR 850.0081
TYR 860.0064
TYR 870.0070
CYS 880.0068
GLN 890.0015
GLN 900.0026
TRP 910.0034
SER 920.0045
SER 930.0043
HIS 940.0040
PRO 950.0048
PRO 960.0029
THR 970.0023
PHE 980.0073
GLY 990.0090
SER 1000.0100
GLY 1010.0126
THR 1020.0104
LYS 1030.0163
LEU 1040.0045
GLU 1050.0039
ILE 1060.0096
LYS 1070.0096
ARG 1080.0068
ALA 1090.0131
ASP 1100.0163
ALA 1110.0194
ALA 1120.0184
PRO 1130.0181
THR 1140.0186
VAL 1150.0196
SER 1160.0105
ILE 1170.0096
PHE 1180.0119
PRO 1190.0137
PRO 1200.0170
SER 1210.0208
SER 1220.0237
GLU 1230.0178
GLN 1240.0171
LEU 1250.0200
THR 1260.0192
SER 1270.0300
GLY 1280.0205
GLY 1290.0141
ALA 1300.0166
SER 1310.0192
VAL 1320.0162
VAL 1330.0171
CYS 1340.0117
PHE 1350.0099
LEU 1360.0103
ASN 1370.0129
ASN 1380.0112
PHE 1390.0096
TYR 1400.0080
PRO 1410.0054
LYS 1420.0078
ASP 1430.0077
ILE 1440.0049
ASN 1450.0083
VAL 1460.0103
LYS 1470.0109
TRP 1480.0141
LYS 1490.0402
ILE 1500.0343
ASP 1510.0224
GLY 1520.0382
SER 1530.0473
GLU 1540.0549
ARG 1550.0426
GLN 1560.0246
ASN 1570.0381
GLY 1580.0306
VAL 1590.0409
LEU 1600.0513
ASN 1610.0378
SER 1620.0188
TRP 1630.0155
THR 1640.0129
ASP 1650.0094
GLN 1660.0039
ASP 1670.0035
SER 1680.0066
LYS 1690.0045
ASP 1700.0078
SER 1710.0046
THR 1720.0065
TYR 1730.0024
SER 1740.0055
MET 1750.0093
SER 1760.0184
SER 1770.0278
THR 1780.0356
LEU 1790.0315
THR 1800.0237
LEU 1810.0099
THR 1820.0213
LYS 1830.0251
ASP 1840.0135
GLU 1850.0131
TYR 1860.0132
GLU 1870.0133
ARG 1880.0193
HIS 1890.0070
ASN 1900.0250
SER 1910.0154
TYR 1920.0260
THR 1930.0320
CYS 1940.0143
GLU 1950.0150
ALA 1960.0118
THR 1970.0048
HIS 1980.0051
LYS 1990.0058
THR 2000.0157
SER 2010.0025
THR 2020.0306
SER 2030.0485
PRO 2040.0205
ILE 2050.0345
VAL 2060.0224
LYS 2070.0202
SER 2080.0204
PHE 2090.0302
ASN 2100.0304
ARG 2110.0391
ASN 2120.0567
GLU 2130.0375
CYS 2140.0350
GLU 10.0088
VAL 20.0127
GLN 30.0145
LEU 40.0066
VAL 50.0069
GLU 60.0065
SER 70.0094
GLY 80.0101
GLY 90.0090
GLY 100.0021
LEU 110.0004
VAL 120.0030
LYS 130.0073
PRO 140.0110
GLY 150.0139
GLY 160.0138
SER 170.0112
LEU 180.0102
LYS 190.0076
LEU 200.0070
SER 210.0067
CYS 220.0058
ALA 230.0045
ALA 240.0075
SER 250.0079
GLY 260.0105
PHE 270.0122
ILE 280.0126
PHE 290.0068
SER 300.0078
ASP 310.0051
TYR 320.0038
TYR 330.0047
MET 340.0048
TYR 350.0054
TRP 360.0054
VAL 370.0066
ARG 380.0065
GLN 390.0057
THR 400.0076
PRO 410.0110
GLU 420.0065
LYS 430.0064
ARG 440.0044
LEU 450.0049
GLU 460.0059
TRP 470.0052
VAL 480.0048
ALA 490.0034
THR 500.0043
ILE 510.0046
SER 520.0038
ASP 520.0062
GLY 530.0075
ASN 540.0062
SER 550.0067
TYR 560.0057
THR 570.0056
TYR 580.0028
TYR 590.0031
VAL 600.0033
ASP 610.0093
SER 620.0065
VAL 630.0021
LYS 640.0039
GLY 650.0028
ARG 660.0035
PHE 670.0024
THR 680.0032
ILE 690.0047
SER 700.0057
ARG 710.0072
ASP 720.0086
ASN 730.0103
ALA 740.0162
LYS 750.0201
ASN 760.0092
ASN 770.0071
LEU 780.0068
TYR 790.0057
LEU 800.0054
GLN 810.0047
MET 820.0065
SER 820.0074
SER 820.0073
LEU 820.0072
LYS 830.0069
SER 840.0089
GLU 850.0084
ASP 860.0063
THR 870.0058
ALA 880.0081
ILE 890.0082
TYR 900.0080
TYR 910.0056
CYS 920.0054
ALA 930.0068
ARG 940.0068
ASP 950.0054
GLY 960.0082
PRO 970.0148
THR 980.0140
ASP 990.0161
SER 1000.0041
SER 1000.0025
GLY 1000.0010
TYR 1000.0020
GLY 1000.0037
GLY 1000.0044
PHE 1000.0057
GLY 1010.0057
TYR 1020.0071
TRP 1030.0066
GLY 1040.0059
GLN 1050.0055
GLY 1060.0082
THR 1070.0082
LEU 1080.0090
VAL 1090.0035
THR 1100.0025
VAL 1110.0037
SER 1120.0113
GLU 1130.0085
ALA 1140.0157
LYS 1150.0233
THR 1160.0113
THR 1170.0050
PRO 1180.0094
PRO 1190.0086
SER 1200.0109
VAL 1210.0096
TYR 1220.0085
PRO 1230.0100
LEU 1240.0147
ALA 1250.0145
PRO 1260.0126
GLY 1270.0303
SER 1280.0218
ALA 1290.0629
ALA 1300.0674
GLN 1330.0339
THR 1340.0231
ASN 1350.0125
SER 1360.0182
MET 1370.0197
VAL 1380.0196
THR 1390.0061
LEU 1400.0049
GLY 1410.0059
CYS 1420.0031
LEU 1430.0014
VAL 1440.0035
LYS 1450.0077
GLY 1460.0039
TYR 1470.0057
PHE 1480.0063
PRO 1490.0106
GLU 1500.0142
PRO 1510.0174
VAL 1520.0175
THR 1530.0219
VAL 1540.0187
THR 1560.0117
TRP 1570.0126
ASN 1620.0121
SER 1630.0061
GLY 1640.0027
SER 1650.0088
LEU 1660.0027
SER 1670.0180
SER 1680.0166
GLY 1690.0061
VAL 1710.0223
HIS 1720.0181
THR 1730.0186
PHE 1740.0101
PRO 1750.0123
ALA 1760.0105
VAL 1770.0090
LEU 1780.0148
GLN 1790.0280
SER 1800.0172
ASP 1830.0079
LEU 1840.0085
TYR 1850.0118
THR 1860.0086
LEU 1870.0103
SER 1880.0121
SER 1890.0144
SER 1900.0144
VAL 1910.0140
THR 1920.0156
VAL 1930.0166
PRO 1940.0171
SER 1950.0152
SER 1960.0170
PRO 1980.0056
ARG 1990.0108
PRO 2000.0184
SER 2020.0108
GLU 2030.0108
THR 2040.0126
VAL 2050.0139
THR 2060.0161
CYS 2080.0115
ASN 2090.0068
VAL 2100.0084
ALA 2110.0192
HIS 2120.0158
PRO 2130.0171
ALA 2140.0152
SER 2150.0123
SER 2160.0177
THR 2170.0044
LYS 2180.0117
VAL 2190.0205
ASP 2200.0147
LYS 2210.0156
LYS 2220.0158
ILE 2230.0163
VAL 2260.0309
PRO 2270.0292
ARG 2280.0209
ASP 2320.0294
CYS 2330.0207

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.