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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0681
ILE 4790.0180
PHE 4800.0188
ILE 4810.0255
SER 4820.0196
ASP 4830.0212
ASP 4840.0271
LYS 4850.0160
ASP 4860.0196
SER 4870.0260
LEU 4880.0157
LYS 4890.0227
CYS 4900.0151
PRO 4910.0132
CYS 4920.0103
ASP 4930.0074
PRO 4940.0159
GLU 4950.0082
MET 4960.0054
VAL 4970.0203
SER 4980.0160
GLN 4990.0233
SER 5000.0681
THR 5010.0156
CYS 5020.0304
ARG 5030.0202
PHE 5040.0150
PHE 5050.0193
VAL 5060.0215
CYS 5070.0185
LYS 5080.0119
CYS 5090.0210
VAL 5100.0280
GLU 5110.0358
ARG 5120.0141
SER 20.0066
VAL 30.0104
LEU 40.0167
SER 50.0273
GLN 60.0164
SER 70.0109
PRO 80.0322
ALA 90.0339
ILE 100.0407
LEU 110.0177
SER 120.0126
ALA 130.0134
SER 140.0084
PRO 150.0095
GLY 160.0178
GLU 170.0224
LYS 180.0221
VAL 190.0149
THR 200.0085
MET 210.0055
THR 220.0110
CYS 230.0216
ARG 240.0316
ALA 250.0359
ARG 260.0287
SER 270.0344
SER 290.0183
VAL 300.0187
SER 310.0198
TYR 320.0064
MET 330.0075
HIS 340.0080
TRP 350.0072
TYR 360.0088
GLN 370.0108
GLN 380.0135
LYS 390.0210
SER 400.0304
GLY 410.0337
SER 420.0297
SER 430.0251
PRO 440.0200
LYS 450.0204
PRO 460.0168
TRP 470.0096
ILE 480.0080
HIS 490.0105
ALA 500.0133
THR 510.0123
SER 520.0118
ASN 530.0115
LEU 540.0067
ALA 550.0081
SER 560.0116
GLY 570.0183
VAL 580.0093
PRO 590.0082
ALA 600.0068
ARG 610.0077
PHE 620.0033
SER 630.0064
GLY 640.0102
SER 650.0163
GLY 660.0186
SER 670.0233
GLY 680.0232
THR 690.0228
SER 700.0245
TYR 710.0087
SER 720.0088
LEU 730.0087
THR 740.0047
ILE 750.0083
SER 760.0148
ARG 770.0228
VAL 780.0160
GLU 790.0119
ALA 800.0085
GLU 810.0074
ASP 820.0117
ALA 830.0124
ALA 840.0086
THR 850.0029
TYR 860.0066
TYR 870.0066
CYS 880.0089
GLN 890.0046
GLN 900.0012
TRP 910.0075
SER 920.0099
SER 930.0126
HIS 940.0178
PRO 950.0209
PRO 960.0115
THR 970.0108
PHE 980.0052
GLY 990.0111
SER 1000.0168
GLY 1010.0112
THR 1020.0124
LYS 1030.0133
LEU 1040.0039
GLU 1050.0035
ILE 1060.0056
LYS 1070.0105
ARG 1080.0185
ALA 1090.0274
ASP 1100.0103
ALA 1110.0044
ALA 1120.0078
PRO 1130.0040
THR 1140.0096
VAL 1150.0109
SER 1160.0071
ILE 1170.0033
PHE 1180.0039
PRO 1190.0095
PRO 1200.0132
SER 1210.0191
SER 1220.0263
GLU 1230.0176
GLN 1240.0130
LEU 1250.0052
THR 1260.0157
SER 1270.0132
GLY 1280.0164
GLY 1290.0132
ALA 1300.0103
SER 1310.0097
VAL 1320.0059
VAL 1330.0042
CYS 1340.0084
PHE 1350.0076
LEU 1360.0085
ASN 1370.0105
ASN 1380.0074
PHE 1390.0076
TYR 1400.0051
PRO 1410.0085
LYS 1420.0125
ASP 1430.0113
ILE 1440.0097
ASN 1450.0081
VAL 1460.0083
LYS 1470.0084
TRP 1480.0080
LYS 1490.0141
ILE 1500.0118
ASP 1510.0051
GLY 1520.0089
SER 1530.0071
GLU 1540.0242
ARG 1550.0167
GLN 1560.0076
ASN 1570.0074
GLY 1580.0051
VAL 1590.0102
LEU 1600.0153
ASN 1610.0145
SER 1620.0139
TRP 1630.0127
THR 1640.0095
ASP 1650.0099
GLN 1660.0095
ASP 1670.0178
SER 1680.0135
LYS 1690.0205
ASP 1700.0154
SER 1710.0146
THR 1720.0145
TYR 1730.0069
SER 1740.0085
MET 1750.0111
SER 1760.0110
SER 1770.0099
THR 1780.0068
LEU 1790.0079
THR 1800.0096
LEU 1810.0092
THR 1820.0176
LYS 1830.0080
ASP 1840.0100
GLU 1850.0062
TYR 1860.0063
GLU 1870.0066
ARG 1880.0109
HIS 1890.0044
ASN 1900.0035
SER 1910.0055
TYR 1920.0085
THR 1930.0132
CYS 1940.0143
GLU 1950.0111
ALA 1960.0113
THR 1970.0127
HIS 1980.0106
LYS 1990.0097
THR 2000.0080
SER 2010.0191
THR 2020.0207
SER 2030.0322
PRO 2040.0245
ILE 2050.0097
VAL 2060.0138
LYS 2070.0158
SER 2080.0165
PHE 2090.0079
ASN 2100.0057
ARG 2110.0050
ASN 2120.0033
GLU 2130.0045
CYS 2140.0123
GLU 10.0119
VAL 20.0219
GLN 30.0137
LEU 40.0089
VAL 50.0097
GLU 60.0062
SER 70.0102
GLY 80.0080
GLY 90.0034
GLY 100.0183
LEU 110.0186
VAL 120.0160
LYS 130.0286
PRO 140.0244
GLY 150.0310
GLY 160.0204
SER 170.0159
LEU 180.0111
LYS 190.0135
LEU 200.0110
SER 210.0142
CYS 220.0112
ALA 230.0125
ALA 240.0122
SER 250.0170
GLY 260.0255
PHE 270.0306
ILE 280.0185
PHE 290.0070
SER 300.0170
ASP 310.0142
TYR 320.0033
TYR 330.0086
MET 340.0063
TYR 350.0066
TRP 360.0054
VAL 370.0101
ARG 380.0060
GLN 390.0040
THR 400.0118
PRO 410.0221
GLU 420.0222
LYS 430.0148
ARG 440.0083
LEU 450.0086
GLU 460.0086
TRP 470.0076
VAL 480.0084
ALA 490.0118
THR 500.0086
ILE 510.0121
SER 520.0083
ASP 520.0108
GLY 530.0188
ASN 540.0345
SER 550.0314
TYR 560.0224
THR 570.0148
TYR 580.0037
TYR 590.0074
VAL 600.0125
ASP 610.0167
SER 620.0200
VAL 630.0121
LYS 640.0093
GLY 650.0119
ARG 660.0164
PHE 670.0119
THR 680.0105
ILE 690.0131
SER 700.0156
ARG 710.0104
ASP 720.0114
ASN 730.0220
ALA 740.0638
LYS 750.0457
ASN 760.0075
ASN 770.0060
LEU 780.0100
TYR 790.0118
LEU 800.0101
GLN 810.0103
MET 820.0188
SER 820.0201
SER 820.0212
LEU 820.0139
LYS 830.0132
SER 840.0060
GLU 850.0079
ASP 860.0134
THR 870.0156
ALA 880.0088
ILE 890.0069
TYR 900.0077
TYR 910.0089
CYS 920.0078
ALA 930.0123
ARG 940.0121
ASP 950.0121
GLY 960.0190
PRO 970.0265
THR 980.0212
ASP 990.0145
SER 1000.0094
SER 1000.0074
GLY 1000.0056
TYR 1000.0082
GLY 1000.0102
GLY 1000.0116
PHE 1000.0124
GLY 1010.0121
TYR 1020.0132
TRP 1030.0176
GLY 1040.0130
GLN 1050.0125
GLY 1060.0089
THR 1070.0052
LEU 1080.0061
VAL 1090.0155
THR 1100.0150
VAL 1110.0104
SER 1120.0206
GLU 1130.0226
ALA 1140.0257
LYS 1150.0113
THR 1160.0075
THR 1170.0052
PRO 1180.0068
PRO 1190.0076
SER 1200.0115
VAL 1210.0098
TYR 1220.0097
PRO 1230.0078
LEU 1240.0087
ALA 1250.0086
PRO 1260.0080
GLY 1270.0134
SER 1280.0120
ALA 1290.0303
ALA 1300.0126
GLN 1330.0267
THR 1340.0127
ASN 1350.0058
SER 1360.0050
MET 1370.0062
VAL 1380.0078
THR 1390.0047
LEU 1400.0028
GLY 1410.0018
CYS 1420.0033
LEU 1430.0068
VAL 1440.0093
LYS 1450.0109
GLY 1460.0083
TYR 1470.0065
PHE 1480.0059
PRO 1490.0070
GLU 1500.0067
PRO 1510.0055
VAL 1520.0055
THR 1530.0073
VAL 1540.0091
THR 1560.0096
TRP 1570.0104
ASN 1620.0118
SER 1630.0082
GLY 1640.0132
SER 1650.0214
LEU 1660.0100
SER 1670.0259
SER 1680.0110
GLY 1690.0180
VAL 1710.0209
HIS 1720.0166
THR 1730.0134
PHE 1740.0121
PRO 1750.0114
ALA 1760.0083
VAL 1770.0138
LEU 1780.0141
GLN 1790.0191
SER 1800.0272
ASP 1830.0092
LEU 1840.0090
TYR 1850.0081
THR 1860.0090
LEU 1870.0095
SER 1880.0087
SER 1890.0079
SER 1900.0094
VAL 1910.0112
THR 1920.0054
VAL 1930.0039
PRO 1940.0042
SER 1950.0061
SER 1960.0097
PRO 1980.0046
ARG 1990.0068
PRO 2000.0067
SER 2020.0066
GLU 2030.0049
THR 2040.0126
VAL 2050.0136
THR 2060.0162
CYS 2080.0117
ASN 2090.0095
VAL 2100.0083
ALA 2110.0096
HIS 2120.0090
PRO 2130.0108
ALA 2140.0118
SER 2150.0165
SER 2160.0140
THR 2170.0127
LYS 2180.0130
VAL 2190.0158
ASP 2200.0124
LYS 2210.0094
LYS 2220.0121
ILE 2230.0086
VAL 2260.0105
PRO 2270.0158
ARG 2280.0155
ASP 2320.0275
CYS 2330.0291

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.