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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0674
ILE 4790.0344
PHE 4800.0328
ILE 4810.0255
SER 4820.0107
ASP 4830.0193
ASP 4840.0332
LYS 4850.0235
ASP 4860.0294
SER 4870.0373
LEU 4880.0204
LYS 4890.0180
CYS 4900.0163
PRO 4910.0106
CYS 4920.0081
ASP 4930.0076
PRO 4940.0175
GLU 4950.0129
MET 4960.0085
VAL 4970.0217
SER 4980.0219
GLN 4990.0373
SER 5000.0663
THR 5010.0330
CYS 5020.0261
ARG 5030.0090
PHE 5040.0120
PHE 5050.0158
VAL 5060.0191
CYS 5070.0193
LYS 5080.0153
CYS 5090.0203
VAL 5100.0259
GLU 5110.0282
ARG 5120.0287
SER 20.0214
VAL 30.0253
LEU 40.0144
SER 50.0194
GLN 60.0229
SER 70.0355
PRO 80.0379
ALA 90.0336
ILE 100.0288
LEU 110.0168
SER 120.0107
ALA 130.0157
SER 140.0190
PRO 150.0030
GLY 160.0116
GLU 170.0152
LYS 180.0174
VAL 190.0227
THR 200.0147
MET 210.0186
THR 220.0181
CYS 230.0104
ARG 240.0145
ALA 250.0241
ARG 260.0373
SER 270.0201
SER 290.0187
VAL 300.0184
SER 310.0203
TYR 320.0092
MET 330.0078
HIS 340.0123
TRP 350.0105
TYR 360.0083
GLN 370.0110
GLN 380.0229
LYS 390.0316
SER 400.0383
GLY 410.0481
SER 420.0302
SER 430.0157
PRO 440.0105
LYS 450.0086
PRO 460.0091
TRP 470.0065
ILE 480.0073
HIS 490.0107
ALA 500.0135
THR 510.0156
SER 520.0139
ASN 530.0208
LEU 540.0185
ALA 550.0255
SER 560.0674
GLY 570.0556
VAL 580.0342
PRO 590.0271
ALA 600.0226
ARG 610.0232
PHE 620.0134
SER 630.0108
GLY 640.0212
SER 650.0330
GLY 660.0203
SER 670.0320
GLY 680.0327
THR 690.0246
SER 700.0139
TYR 710.0089
SER 720.0132
LEU 730.0179
THR 740.0240
ILE 750.0180
SER 760.0114
ARG 770.0053
VAL 780.0192
GLU 790.0317
ALA 800.0269
GLU 810.0334
ASP 820.0344
ALA 830.0223
ALA 840.0209
THR 850.0226
TYR 860.0114
TYR 870.0099
CYS 880.0088
GLN 890.0099
GLN 900.0053
TRP 910.0018
SER 920.0031
SER 930.0046
HIS 940.0088
PRO 950.0105
PRO 960.0112
THR 970.0152
PHE 980.0069
GLY 990.0087
SER 1000.0117
GLY 1010.0215
THR 1020.0241
LYS 1030.0212
LEU 1040.0106
GLU 1050.0093
ILE 1060.0112
LYS 1070.0181
ARG 1080.0152
ALA 1090.0147
ASP 1100.0087
ALA 1110.0090
ALA 1120.0070
PRO 1130.0032
THR 1140.0045
VAL 1150.0084
SER 1160.0062
ILE 1170.0039
PHE 1180.0022
PRO 1190.0053
PRO 1200.0083
SER 1210.0102
SER 1220.0111
GLU 1230.0099
GLN 1240.0090
LEU 1250.0068
THR 1260.0070
SER 1270.0126
GLY 1280.0100
GLY 1290.0068
ALA 1300.0051
SER 1310.0080
VAL 1320.0055
VAL 1330.0043
CYS 1340.0053
PHE 1350.0054
LEU 1360.0058
ASN 1370.0056
ASN 1380.0042
PHE 1390.0049
TYR 1400.0076
PRO 1410.0070
LYS 1420.0073
ASP 1430.0068
ILE 1440.0041
ASN 1450.0057
VAL 1460.0046
LYS 1470.0033
TRP 1480.0030
LYS 1490.0128
ILE 1500.0121
ASP 1510.0091
GLY 1520.0179
SER 1530.0144
GLU 1540.0179
ARG 1550.0104
GLN 1560.0067
ASN 1570.0127
GLY 1580.0100
VAL 1590.0107
LEU 1600.0119
ASN 1610.0077
SER 1620.0057
TRP 1630.0040
THR 1640.0034
ASP 1650.0035
GLN 1660.0070
ASP 1670.0108
SER 1680.0246
LYS 1690.0294
ASP 1700.0098
SER 1710.0071
THR 1720.0096
TYR 1730.0046
SER 1740.0042
MET 1750.0054
SER 1760.0065
SER 1770.0064
THR 1780.0078
LEU 1790.0097
THR 1800.0087
LEU 1810.0053
THR 1820.0124
LYS 1830.0095
ASP 1840.0098
GLU 1850.0041
TYR 1860.0019
GLU 1870.0054
ARG 1880.0095
HIS 1890.0060
ASN 1900.0033
SER 1910.0059
TYR 1920.0082
THR 1930.0103
CYS 1940.0079
GLU 1950.0070
ALA 1960.0066
THR 1970.0066
HIS 1980.0074
LYS 1990.0133
THR 2000.0136
SER 2010.0092
THR 2020.0072
SER 2030.0286
PRO 2040.0137
ILE 2050.0112
VAL 2060.0098
LYS 2070.0108
SER 2080.0102
PHE 2090.0077
ASN 2100.0060
ARG 2110.0071
ASN 2120.0098
GLU 2130.0077
CYS 2140.0087
GLU 10.0214
VAL 20.0088
GLN 30.0234
LEU 40.0133
VAL 50.0111
GLU 60.0117
SER 70.0112
GLY 80.0137
GLY 90.0161
GLY 100.0130
LEU 110.0089
VAL 120.0086
LYS 130.0180
PRO 140.0158
GLY 150.0158
GLY 160.0049
SER 170.0125
LEU 180.0254
LYS 190.0155
LEU 200.0126
SER 210.0072
CYS 220.0190
ALA 230.0198
ALA 240.0250
SER 250.0316
GLY 260.0252
PHE 270.0248
ILE 280.0263
PHE 290.0257
SER 300.0175
ASP 310.0113
TYR 320.0080
TYR 330.0081
MET 340.0072
TYR 350.0077
TRP 360.0075
VAL 370.0120
ARG 380.0080
GLN 390.0099
THR 400.0120
PRO 410.0319
GLU 420.0180
LYS 430.0147
ARG 440.0208
LEU 450.0164
GLU 460.0143
TRP 470.0154
VAL 480.0163
ALA 490.0095
THR 500.0049
ILE 510.0044
SER 520.0082
ASP 520.0103
GLY 530.0160
ASN 540.0249
SER 550.0157
TYR 560.0108
THR 570.0077
TYR 580.0122
TYR 590.0190
VAL 600.0237
ASP 610.0355
SER 620.0289
VAL 630.0238
LYS 640.0254
GLY 650.0196
ARG 660.0151
PHE 670.0127
THR 680.0072
ILE 690.0039
SER 700.0134
ARG 710.0135
ASP 720.0117
ASN 730.0231
ALA 740.0220
LYS 750.0247
ASN 760.0208
ASN 770.0189
LEU 780.0190
TYR 790.0057
LEU 800.0089
GLN 810.0094
MET 820.0184
SER 820.0101
SER 820.0056
LEU 820.0066
LYS 830.0150
SER 840.0156
GLU 850.0163
ASP 860.0115
THR 870.0041
ALA 880.0031
ILE 890.0045
TYR 900.0034
TYR 910.0061
CYS 920.0083
ALA 930.0076
ARG 940.0130
ASP 950.0106
GLY 960.0126
PRO 970.0296
THR 980.0324
ASP 990.0462
SER 1000.0133
SER 1000.0089
GLY 1000.0058
TYR 1000.0053
GLY 1000.0040
GLY 1000.0080
PHE 1000.0106
GLY 1010.0121
TYR 1020.0144
TRP 1030.0034
GLY 1040.0077
GLN 1050.0099
GLY 1060.0103
THR 1070.0084
LEU 1080.0068
VAL 1090.0106
THR 1100.0081
VAL 1110.0079
SER 1120.0131
GLU 1130.0141
ALA 1140.0102
LYS 1150.0046
THR 1160.0050
THR 1170.0044
PRO 1180.0039
PRO 1190.0037
SER 1200.0044
VAL 1210.0038
TYR 1220.0044
PRO 1230.0040
LEU 1240.0040
ALA 1250.0034
PRO 1260.0024
GLY 1270.0052
SER 1280.0038
ALA 1290.0149
ALA 1300.0081
GLN 1330.0038
THR 1340.0037
ASN 1350.0039
SER 1360.0066
MET 1370.0051
VAL 1380.0025
THR 1390.0028
LEU 1400.0014
GLY 1410.0015
CYS 1420.0012
LEU 1430.0011
VAL 1440.0013
LYS 1450.0044
GLY 1460.0039
TYR 1470.0032
PHE 1480.0040
PRO 1490.0029
GLU 1500.0037
PRO 1510.0050
VAL 1520.0058
THR 1530.0093
VAL 1540.0075
THR 1560.0053
TRP 1570.0057
ASN 1620.0087
SER 1630.0058
GLY 1640.0055
SER 1650.0055
LEU 1660.0044
SER 1670.0050
SER 1680.0055
GLY 1690.0042
VAL 1710.0077
HIS 1720.0081
THR 1730.0089
PHE 1740.0076
PRO 1750.0068
ALA 1760.0070
VAL 1770.0101
LEU 1780.0088
GLN 1790.0090
SER 1800.0085
ASP 1830.0060
LEU 1840.0016
TYR 1850.0046
THR 1860.0041
LEU 1870.0048
SER 1880.0063
SER 1890.0060
SER 1900.0057
VAL 1910.0045
THR 1920.0017
VAL 1930.0025
PRO 1940.0028
SER 1950.0045
SER 1960.0052
PRO 1980.0019
ARG 1990.0056
PRO 2000.0082
SER 2020.0021
GLU 2030.0046
THR 2040.0097
VAL 2050.0082
THR 2060.0083
CYS 2080.0058
ASN 2090.0041
VAL 2100.0046
ALA 2110.0092
HIS 2120.0056
PRO 2130.0082
ALA 2140.0040
SER 2150.0053
SER 2160.0069
THR 2170.0048
LYS 2180.0048
VAL 2190.0048
ASP 2200.0029
LYS 2210.0030
LYS 2220.0033
ILE 2230.0058
VAL 2260.0119
PRO 2270.0103
ARG 2280.0079
ASP 2320.0087
CYS 2330.0060

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.