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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0401
ILE 4790.0064
PHE 4800.0060
ILE 4810.0072
SER 4820.0089
ASP 4830.0110
ASP 4840.0115
LYS 4850.0104
ASP 4860.0109
SER 4870.0100
LEU 4880.0089
LYS 4890.0093
CYS 4900.0086
PRO 4910.0091
CYS 4920.0093
ASP 4930.0095
PRO 4940.0083
GLU 4950.0081
MET 4960.0092
VAL 4970.0095
SER 4980.0124
GLN 4990.0141
SER 5000.0177
THR 5010.0178
CYS 5020.0143
ARG 5030.0120
PHE 5040.0100
PHE 5050.0089
VAL 5060.0070
CYS 5070.0068
LYS 5080.0062
CYS 5090.0070
VAL 5100.0065
GLU 5110.0074
ARG 5120.0073
SER 20.0088
VAL 30.0100
LEU 40.0097
SER 50.0106
GLN 60.0103
SER 70.0110
PRO 80.0112
ALA 90.0104
ILE 100.0087
LEU 110.0085
SER 120.0076
ALA 130.0076
SER 140.0066
PRO 150.0068
GLY 160.0073
GLU 170.0081
LYS 180.0089
VAL 190.0092
THR 200.0095
MET 210.0098
THR 220.0102
CYS 230.0094
ARG 240.0094
ALA 250.0090
ARG 260.0095
SER 270.0078
SER 290.0064
VAL 300.0064
SER 310.0055
TYR 320.0062
MET 330.0073
HIS 340.0078
TRP 350.0076
TYR 360.0079
GLN 370.0085
GLN 380.0078
LYS 390.0075
SER 400.0087
GLY 410.0109
SER 420.0087
SER 430.0086
PRO 440.0089
LYS 450.0081
PRO 460.0083
TRP 470.0078
ILE 480.0074
HIS 490.0069
ALA 500.0064
THR 510.0070
SER 520.0069
ASN 530.0067
LEU 540.0073
ALA 550.0074
SER 560.0069
GLY 570.0079
VAL 580.0082
PRO 590.0094
ALA 600.0092
ARG 610.0091
PHE 620.0088
SER 630.0085
GLY 640.0083
SER 650.0076
GLY 660.0073
SER 670.0064
GLY 680.0064
THR 690.0078
SER 700.0082
TYR 710.0082
SER 720.0087
LEU 730.0087
THR 740.0096
ILE 750.0090
SER 760.0090
ARG 770.0083
VAL 780.0081
GLU 790.0080
ALA 800.0072
GLU 810.0086
ASP 820.0087
ALA 830.0088
ALA 840.0077
THR 850.0074
TYR 860.0083
TYR 870.0082
CYS 880.0078
GLN 890.0090
GLN 900.0078
TRP 910.0074
SER 920.0067
SER 930.0072
HIS 940.0085
PRO 950.0092
PRO 960.0091
THR 970.0096
PHE 980.0086
GLY 990.0088
SER 1000.0102
GLY 1010.0100
THR 1020.0089
LYS 1030.0075
LEU 1040.0095
GLU 1050.0077
ILE 1060.0069
LYS 1070.0080
ARG 1080.0098
ALA 1090.0123
ASP 1100.0154
ALA 1110.0150
ALA 1120.0179
PRO 1130.0209
THR 1140.0198
VAL 1150.0195
SER 1160.0180
ILE 1170.0144
PHE 1180.0095
PRO 1190.0063
PRO 1200.0030
SER 1210.0072
SER 1220.0150
GLU 1230.0171
GLN 1240.0144
LEU 1250.0160
THR 1260.0236
SER 1270.0252
GLY 1280.0211
GLY 1290.0154
ALA 1300.0074
SER 1310.0058
VAL 1320.0069
VAL 1330.0118
CYS 1340.0168
PHE 1350.0180
LEU 1360.0212
ASN 1370.0205
ASN 1380.0190
PHE 1390.0192
TYR 1400.0167
PRO 1410.0175
LYS 1420.0199
ASP 1430.0262
ILE 1440.0265
ASN 1450.0299
VAL 1460.0277
LYS 1470.0268
TRP 1480.0215
LYS 1490.0215
ILE 1500.0159
ASP 1510.0198
GLY 1520.0263
SER 1530.0276
GLU 1540.0240
ARG 1550.0246
GLN 1560.0202
ASN 1570.0227
GLY 1580.0173
VAL 1590.0176
LEU 1600.0191
ASN 1610.0216
SER 1620.0216
TRP 1630.0228
THR 1640.0177
ASP 1650.0149
GLN 1660.0139
ASP 1670.0147
SER 1680.0114
LYS 1690.0103
ASP 1700.0125
SER 1710.0117
THR 1720.0152
TYR 1730.0180
SER 1740.0201
MET 1750.0218
SER 1760.0198
SER 1770.0184
THR 1780.0146
LEU 1790.0123
THR 1800.0105
LEU 1810.0070
THR 1820.0113
LYS 1830.0133
ASP 1840.0143
GLU 1850.0070
TYR 1860.0068
GLU 1870.0145
ARG 1880.0141
HIS 1890.0138
ASN 1900.0192
SER 1910.0192
TYR 1920.0161
THR 1930.0211
CYS 1940.0217
GLU 1950.0269
ALA 1960.0281
THR 1970.0304
HIS 1980.0266
LYS 1990.0272
THR 2000.0240
SER 2010.0274
THR 2020.0358
SER 2030.0351
PRO 2040.0323
ILE 2050.0275
VAL 2060.0271
LYS 2070.0227
SER 2080.0204
PHE 2090.0216
ASN 2100.0218
ARG 2110.0179
ASN 2120.0271
GLU 2130.0287
CYS 2140.0289
GLU 10.0173
VAL 20.0153
GLN 30.0154
LEU 40.0139
VAL 50.0143
GLU 60.0133
SER 70.0122
GLY 80.0094
GLY 90.0092
GLY 100.0071
LEU 110.0085
VAL 120.0050
LYS 130.0057
PRO 140.0066
GLY 150.0056
GLY 160.0042
SER 170.0060
LEU 180.0071
LYS 190.0108
LEU 200.0116
SER 210.0126
CYS 220.0138
ALA 230.0150
ALA 240.0151
SER 250.0163
GLY 260.0163
PHE 270.0152
ILE 280.0147
PHE 290.0144
SER 300.0138
ASP 310.0124
TYR 320.0120
TYR 330.0118
MET 340.0120
TYR 350.0117
TRP 360.0119
VAL 370.0113
ARG 380.0118
GLN 390.0119
THR 400.0115
PRO 410.0123
GLU 420.0117
LYS 430.0117
ARG 440.0115
LEU 450.0106
GLU 460.0117
TRP 470.0116
VAL 480.0118
ALA 490.0119
THR 500.0117
ILE 510.0122
SER 520.0119
ASP 520.0125
GLY 530.0129
ASN 540.0129
SER 550.0130
TYR 560.0120
THR 570.0122
TYR 580.0117
TYR 590.0121
VAL 600.0120
ASP 610.0144
SER 620.0142
VAL 630.0135
LYS 640.0134
GLY 650.0131
ARG 660.0125
PHE 670.0123
THR 680.0123
ILE 690.0124
SER 700.0127
ARG 710.0137
ASP 720.0149
ASN 730.0152
ALA 740.0164
LYS 750.0167
ASN 760.0156
ASN 770.0149
LEU 780.0137
TYR 790.0133
LEU 800.0123
GLN 810.0111
MET 820.0106
SER 820.0098
SER 820.0099
LEU 820.0103
LYS 830.0120
SER 840.0128
GLU 850.0145
ASP 860.0135
THR 870.0129
ALA 880.0127
ILE 890.0124
TYR 900.0124
TYR 910.0118
CYS 920.0118
ALA 930.0115
ARG 940.0113
ASP 950.0100
GLY 960.0102
PRO 970.0103
THR 980.0086
ASP 990.0072
SER 1000.0076
SER 1000.0076
GLY 1000.0070
TYR 1000.0067
GLY 1000.0075
GLY 1000.0083
PHE 1000.0096
GLY 1010.0098
TYR 1020.0110
TRP 1030.0103
GLY 1040.0116
GLN 1050.0124
GLY 1060.0140
THR 1070.0102
LEU 1080.0098
VAL 1090.0104
THR 1100.0106
VAL 1110.0092
SER 1120.0124
GLU 1130.0124
ALA 1140.0183
LYS 1150.0204
THR 1160.0230
THR 1170.0247
PRO 1180.0268
PRO 1190.0237
SER 1200.0205
VAL 1210.0177
TYR 1220.0111
PRO 1230.0064
LEU 1240.0046
ALA 1250.0064
PRO 1260.0141
GLY 1270.0188
SER 1280.0296
ALA 1290.0342
ALA 1300.0309
GLN 1330.0327
THR 1340.0372
ASN 1350.0401
SER 1360.0398
MET 1370.0328
VAL 1380.0250
THR 1390.0188
LEU 1400.0126
GLY 1410.0123
CYS 1420.0127
LEU 1430.0133
VAL 1440.0182
LYS 1450.0184
GLY 1460.0197
TYR 1470.0234
PHE 1480.0242
PRO 1490.0254
GLU 1500.0269
PRO 1510.0312
VAL 1520.0305
THR 1530.0327
VAL 1540.0260
THR 1560.0280
TRP 1570.0226
ASN 1620.0221
SER 1630.0295
GLY 1640.0339
SER 1650.0301
LEU 1660.0286
SER 1670.0349
SER 1680.0366
GLY 1690.0328
VAL 1710.0247
HIS 1720.0236
THR 1730.0224
PHE 1740.0206
PRO 1750.0230
ALA 1760.0215
VAL 1770.0222
LEU 1780.0230
GLN 1790.0199
SER 1800.0208
ASP 1830.0224
LEU 1840.0219
TYR 1850.0220
THR 1860.0191
LEU 1870.0192
SER 1880.0163
SER 1890.0192
SER 1900.0189
VAL 1910.0206
THR 1920.0253
VAL 1930.0256
PRO 1940.0301
SER 1950.0279
SER 1960.0280
PRO 1980.0210
ARG 1990.0167
PRO 2000.0125
SER 2020.0140
GLU 2030.0102
THR 2040.0066
VAL 2050.0101
THR 2060.0142
CYS 2080.0184
ASN 2090.0249
VAL 2100.0275
ALA 2110.0326
HIS 2120.0318
PRO 2130.0368
ALA 2140.0346
SER 2150.0333
SER 2160.0368
THR 2170.0333
LYS 2180.0333
VAL 2190.0279
ASP 2200.0225
LYS 2210.0154
LYS 2220.0102
ILE 2230.0034
VAL 2260.0074
PRO 2270.0137
ARG 2280.0172
ASP 2320.0266
CYS 2330.0322

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.