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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1153
ILE 4790.0450
PHE 4800.0341
ILE 4810.0375
SER 4820.0435
ASP 4830.0429
ASP 4840.0313
LYS 4850.0187
ASP 4860.0197
SER 4870.0302
LEU 4880.0226
LYS 4890.0215
CYS 4900.0154
PRO 4910.0105
CYS 4920.0063
ASP 4930.0050
PRO 4940.0087
GLU 4950.0153
MET 4960.0269
VAL 4970.0439
SER 4980.0638
GLN 4990.0910
SER 5000.1153
THR 5010.1070
CYS 5020.0850
ARG 5030.0541
PHE 5040.0462
PHE 5050.0292
VAL 5060.0228
CYS 5070.0150
LYS 5080.0099
CYS 5090.0074
VAL 5100.0118
GLU 5110.0155
ARG 5120.0179
SER 20.0067
VAL 30.0096
LEU 40.0112
SER 50.0133
GLN 60.0140
SER 70.0156
PRO 80.0151
ALA 90.0137
ILE 100.0116
LEU 110.0106
SER 120.0079
ALA 130.0073
SER 140.0050
PRO 150.0051
GLY 160.0068
GLU 170.0082
LYS 180.0104
VAL 190.0109
THR 200.0141
MET 210.0140
THR 220.0148
CYS 230.0135
ARG 240.0129
ALA 250.0105
ARG 260.0093
SER 270.0078
SER 290.0073
VAL 300.0070
SER 310.0082
TYR 320.0081
MET 330.0096
HIS 340.0106
TRP 350.0113
TYR 360.0110
GLN 370.0116
GLN 380.0117
LYS 390.0111
SER 400.0111
GLY 410.0152
SER 420.0145
SER 430.0135
PRO 440.0120
LYS 450.0116
PRO 460.0107
TRP 470.0109
ILE 480.0109
HIS 490.0095
ALA 500.0103
THR 510.0108
SER 520.0114
ASN 530.0107
LEU 540.0113
ALA 550.0109
SER 560.0126
GLY 570.0128
VAL 580.0120
PRO 590.0089
ALA 600.0103
ARG 610.0098
PHE 620.0112
SER 630.0121
GLY 640.0127
SER 650.0128
GLY 660.0130
SER 670.0127
GLY 680.0114
THR 690.0115
SER 700.0133
TYR 710.0128
SER 720.0136
LEU 730.0133
THR 740.0128
ILE 750.0108
SER 760.0110
ARG 770.0086
VAL 780.0074
GLU 790.0060
ALA 800.0047
GLU 810.0053
ASP 820.0070
ALA 830.0074
ALA 840.0089
THR 850.0109
TYR 860.0118
TYR 870.0117
CYS 880.0119
GLN 890.0101
GLN 900.0069
TRP 910.0050
SER 920.0041
SER 930.0061
HIS 940.0090
PRO 950.0092
PRO 960.0074
THR 970.0096
PHE 980.0106
GLY 990.0115
SER 1000.0123
GLY 1010.0133
THR 1020.0125
LYS 1030.0103
LEU 1040.0078
GLU 1050.0053
ILE 1060.0043
LYS 1070.0034
ARG 1080.0062
ALA 1090.0094
ASP 1100.0103
ALA 1110.0098
ALA 1120.0097
PRO 1130.0087
THR 1140.0078
VAL 1150.0076
SER 1160.0071
ILE 1170.0069
PHE 1180.0066
PRO 1190.0072
PRO 1200.0071
SER 1210.0073
SER 1220.0087
GLU 1230.0082
GLN 1240.0071
LEU 1250.0082
THR 1260.0090
SER 1270.0080
GLY 1280.0075
GLY 1290.0068
ALA 1300.0073
SER 1310.0066
VAL 1320.0068
VAL 1330.0071
CYS 1340.0070
PHE 1350.0074
LEU 1360.0081
ASN 1370.0082
ASN 1380.0082
PHE 1390.0084
TYR 1400.0082
PRO 1410.0077
LYS 1420.0072
ASP 1430.0099
ILE 1440.0092
ASN 1450.0092
VAL 1460.0108
LYS 1470.0109
TRP 1480.0098
LYS 1490.0119
ILE 1500.0118
ASP 1510.0131
GLY 1520.0150
SER 1530.0144
GLU 1540.0147
ARG 1550.0136
GLN 1560.0124
ASN 1570.0122
GLY 1580.0092
VAL 1590.0091
LEU 1600.0095
ASN 1610.0082
SER 1620.0088
TRP 1630.0094
THR 1640.0084
ASP 1650.0063
GLN 1660.0054
ASP 1670.0054
SER 1680.0053
LYS 1690.0073
ASP 1700.0075
SER 1710.0061
THR 1720.0069
TYR 1730.0069
SER 1740.0075
MET 1750.0079
SER 1760.0084
SER 1770.0079
THR 1780.0072
LEU 1790.0082
THR 1800.0076
LEU 1810.0078
THR 1820.0082
LYS 1830.0088
ASP 1840.0103
GLU 1850.0106
TYR 1860.0098
GLU 1870.0113
ARG 1880.0128
HIS 1890.0129
ASN 1900.0129
SER 1910.0116
TYR 1920.0101
THR 1930.0103
CYS 1940.0090
GLU 1950.0102
ALA 1960.0105
THR 1970.0098
HIS 1980.0100
LYS 1990.0111
THR 2000.0112
SER 2010.0109
THR 2020.0125
SER 2030.0117
PRO 2040.0111
ILE 2050.0096
VAL 2060.0099
LYS 2070.0086
SER 2080.0089
PHE 2090.0099
ASN 2100.0114
ARG 2110.0112
ASN 2120.0133
GLU 2130.0125
CYS 2140.0119
GLU 10.0171
VAL 20.0151
GLN 30.0181
LEU 40.0172
VAL 50.0201
GLU 60.0199
SER 70.0219
GLY 80.0215
GLY 90.0174
GLY 100.0119
LEU 110.0107
VAL 120.0093
LYS 130.0087
PRO 140.0081
GLY 150.0094
GLY 160.0132
SER 170.0155
LEU 180.0174
LYS 190.0215
LEU 200.0200
SER 210.0212
CYS 220.0204
ALA 230.0215
ALA 240.0182
SER 250.0182
GLY 260.0161
PHE 270.0120
ILE 280.0109
PHE 290.0130
SER 300.0123
ASP 310.0067
TYR 320.0071
TYR 330.0085
MET 340.0118
TYR 350.0115
TRP 360.0135
VAL 370.0120
ARG 380.0128
GLN 390.0130
THR 400.0132
PRO 410.0145
GLU 420.0143
LYS 430.0136
ARG 440.0123
LEU 450.0112
GLU 460.0109
TRP 470.0104
VAL 480.0124
ALA 490.0134
THR 500.0122
ILE 510.0144
SER 520.0123
ASP 520.0120
GLY 530.0159
ASN 540.0214
SER 550.0185
TYR 560.0186
THR 570.0178
TYR 580.0142
TYR 590.0144
VAL 600.0124
ASP 610.0110
SER 620.0110
VAL 630.0127
LYS 640.0133
GLY 650.0155
ARG 660.0155
PHE 670.0169
THR 680.0189
ILE 690.0184
SER 700.0205
ARG 710.0203
ASP 720.0235
ASN 730.0208
ALA 740.0246
LYS 750.0252
ASN 760.0204
ASN 770.0213
LEU 780.0196
TYR 790.0209
LEU 800.0190
GLN 810.0201
MET 820.0166
SER 820.0161
SER 820.0139
LEU 820.0129
LYS 830.0109
SER 840.0109
GLU 850.0114
ASP 860.0124
THR 870.0132
ALA 880.0138
ILE 890.0144
TYR 900.0143
TYR 910.0142
CYS 920.0143
ALA 930.0124
ARG 940.0096
ASP 950.0073
GLY 960.0105
PRO 970.0175
THR 980.0190
ASP 990.0207
SER 1000.0136
SER 1000.0094
GLY 1000.0071
TYR 1000.0070
GLY 1000.0046
GLY 1000.0078
PHE 1000.0101
GLY 1010.0118
TYR 1020.0141
TRP 1030.0128
GLY 1040.0149
GLN 1050.0169
GLY 1060.0161
THR 1070.0159
LEU 1080.0134
VAL 1090.0126
THR 1100.0111
VAL 1110.0099
SER 1120.0087
GLU 1130.0105
ALA 1140.0114
LYS 1150.0125
THR 1160.0114
THR 1170.0108
PRO 1180.0100
PRO 1190.0088
SER 1200.0074
VAL 1210.0076
TYR 1220.0065
PRO 1230.0066
LEU 1240.0068
ALA 1250.0070
PRO 1260.0069
GLY 1270.0086
SER 1280.0098
ALA 1290.0092
ALA 1300.0078
GLN 1330.0091
THR 1340.0086
ASN 1350.0075
SER 1360.0077
MET 1370.0079
VAL 1380.0077
THR 1390.0072
LEU 1400.0073
GLY 1410.0076
CYS 1420.0071
LEU 1430.0068
VAL 1440.0082
LYS 1450.0079
GLY 1460.0085
TYR 1470.0096
PHE 1480.0108
PRO 1490.0109
GLU 1500.0110
PRO 1510.0115
VAL 1520.0094
THR 1530.0087
VAL 1540.0104
THR 1560.0118
TRP 1570.0111
ASN 1620.0129
SER 1630.0144
GLY 1640.0153
SER 1650.0154
LEU 1660.0132
SER 1670.0135
SER 1680.0124
GLY 1690.0103
VAL 1710.0097
HIS 1720.0095
THR 1730.0104
PHE 1740.0096
PRO 1750.0109
ALA 1760.0114
VAL 1770.0110
LEU 1780.0115
GLN 1790.0111
SER 1800.0113
ASP 1830.0114
LEU 1840.0109
TYR 1850.0107
THR 1860.0095
LEU 1870.0093
SER 1880.0080
SER 1890.0089
SER 1900.0081
VAL 1910.0085
THR 1920.0089
VAL 1930.0095
PRO 1940.0094
SER 1950.0093
SER 1960.0114
PRO 1980.0120
ARG 1990.0106
PRO 2000.0111
SER 2020.0131
GLU 2030.0135
THR 2040.0126
VAL 2050.0105
THR 2060.0106
CYS 2080.0093
ASN 2090.0105
VAL 2100.0103
ALA 2110.0101
HIS 2120.0105
PRO 2130.0129
ALA 2140.0124
SER 2150.0117
SER 2160.0119
THR 2170.0109
LYS 2180.0113
VAL 2190.0096
ASP 2200.0106
LYS 2210.0089
LYS 2220.0094
ILE 2230.0086
VAL 2260.0097
PRO 2270.0094
ARG 2280.0096
ASP 2320.0126
CYS 2330.0135

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.