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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1427
ILE 4790.0200
PHE 4800.0125
ILE 4810.0040
SER 4820.0075
ASP 4830.0230
ASP 4840.0336
LYS 4850.0242
ASP 4860.0278
SER 4870.0288
LEU 4880.0184
LYS 4890.0193
CYS 4900.0135
PRO 4910.0103
CYS 4920.0077
ASP 4930.0069
PRO 4940.0097
GLU 4950.0068
MET 4960.0216
VAL 4970.0455
SER 4980.0738
GLN 4990.1061
SER 5000.1427
THR 5010.1289
CYS 5020.0914
ARG 5030.0599
PHE 5040.0306
PHE 5050.0092
VAL 5060.0044
CYS 5070.0055
LYS 5080.0077
CYS 5090.0085
VAL 5100.0103
GLU 5110.0124
ARG 5120.0121
SER 20.0114
VAL 30.0127
LEU 40.0128
SER 50.0142
GLN 60.0123
SER 70.0133
PRO 80.0123
ALA 90.0116
ILE 100.0106
LEU 110.0089
SER 120.0085
ALA 130.0092
SER 140.0101
PRO 150.0110
GLY 160.0131
GLU 170.0130
LYS 180.0128
VAL 190.0111
THR 200.0115
MET 210.0106
THR 220.0120
CYS 230.0120
ARG 240.0144
ALA 250.0135
ARG 260.0160
SER 270.0158
SER 290.0142
VAL 300.0115
SER 310.0114
TYR 320.0078
MET 330.0069
HIS 340.0059
TRP 350.0060
TYR 360.0065
GLN 370.0068
GLN 380.0090
LYS 390.0099
SER 400.0126
GLY 410.0156
SER 420.0140
SER 430.0124
PRO 440.0093
LYS 450.0086
PRO 460.0070
TRP 470.0071
ILE 480.0068
HIS 490.0070
ALA 500.0080
THR 510.0085
SER 520.0099
ASN 530.0097
LEU 540.0103
ALA 550.0102
SER 560.0140
GLY 570.0145
VAL 580.0119
PRO 590.0130
ALA 600.0144
ARG 610.0132
PHE 620.0107
SER 630.0112
GLY 640.0101
SER 650.0121
GLY 660.0139
SER 670.0153
GLY 680.0161
THR 690.0154
SER 700.0153
TYR 710.0119
SER 720.0111
LEU 730.0096
THR 740.0107
ILE 750.0110
SER 760.0136
ARG 770.0131
VAL 780.0106
GLU 790.0106
ALA 800.0090
GLU 810.0098
ASP 820.0080
ALA 830.0066
ALA 840.0071
THR 850.0074
TYR 860.0072
TYR 870.0077
CYS 880.0076
GLN 890.0071
GLN 900.0076
TRP 910.0072
SER 920.0083
SER 930.0092
HIS 940.0088
PRO 950.0076
PRO 960.0072
THR 970.0089
PHE 980.0094
GLY 990.0113
SER 1000.0131
GLY 1010.0096
THR 1020.0086
LYS 1030.0081
LEU 1040.0060
GLU 1050.0062
ILE 1060.0071
LYS 1070.0079
ARG 1080.0073
ALA 1090.0070
ASP 1100.0062
ALA 1110.0045
ALA 1120.0037
PRO 1130.0025
THR 1140.0015
VAL 1150.0017
SER 1160.0031
ILE 1170.0032
PHE 1180.0046
PRO 1190.0043
PRO 1200.0056
SER 1210.0069
SER 1220.0077
GLU 1230.0090
GLN 1240.0086
LEU 1250.0082
THR 1260.0099
SER 1270.0110
GLY 1280.0099
GLY 1290.0094
ALA 1300.0074
SER 1310.0069
VAL 1320.0053
VAL 1330.0054
CYS 1340.0041
PHE 1350.0046
LEU 1360.0037
ASN 1370.0036
ASN 1380.0036
PHE 1390.0043
TYR 1400.0060
PRO 1410.0066
LYS 1420.0067
ASP 1430.0076
ILE 1440.0066
ASN 1450.0073
VAL 1460.0056
LYS 1470.0060
TRP 1480.0051
LYS 1490.0052
ILE 1500.0048
ASP 1510.0048
GLY 1520.0069
SER 1530.0071
GLU 1540.0082
ARG 1550.0081
GLN 1560.0083
ASN 1570.0099
GLY 1580.0087
VAL 1590.0076
LEU 1600.0082
ASN 1610.0078
SER 1620.0081
TRP 1630.0070
THR 1640.0050
ASP 1650.0038
GLN 1660.0056
ASP 1670.0058
SER 1680.0076
LYS 1690.0086
ASP 1700.0070
SER 1710.0069
THR 1720.0056
TYR 1730.0049
SER 1740.0049
MET 1750.0057
SER 1760.0065
SER 1770.0063
THR 1780.0070
LEU 1790.0069
THR 1800.0082
LEU 1810.0080
THR 1820.0090
LYS 1830.0075
ASP 1840.0068
GLU 1850.0066
TYR 1860.0049
GLU 1870.0035
ARG 1880.0039
HIS 1890.0037
ASN 1900.0027
SER 1910.0026
TYR 1920.0019
THR 1930.0025
CYS 1940.0026
GLU 1950.0043
ALA 1960.0046
THR 1970.0067
HIS 1980.0065
LYS 1990.0076
THR 2000.0064
SER 2010.0068
THR 2020.0093
SER 2030.0085
PRO 2040.0064
ILE 2050.0039
VAL 2060.0030
LYS 2070.0014
SER 2080.0015
PHE 2090.0025
ASN 2100.0027
ARG 2110.0021
ASN 2120.0046
GLU 2130.0054
CYS 2140.0067
GLU 10.0239
VAL 20.0190
GLN 30.0193
LEU 40.0154
VAL 50.0181
GLU 60.0170
SER 70.0171
GLY 80.0189
GLY 90.0180
GLY 100.0150
LEU 110.0148
VAL 120.0173
LYS 130.0179
PRO 140.0193
GLY 150.0212
GLY 160.0203
SER 170.0186
LEU 180.0176
LYS 190.0167
LEU 200.0159
SER 210.0160
CYS 220.0158
ALA 230.0189
ALA 240.0180
SER 250.0225
GLY 260.0237
PHE 270.0215
ILE 280.0224
PHE 290.0181
SER 300.0175
ASP 310.0169
TYR 320.0118
TYR 330.0068
MET 340.0070
TYR 350.0055
TRP 360.0079
VAL 370.0094
ARG 380.0124
GLN 390.0147
THR 400.0179
PRO 410.0217
GLU 420.0224
LYS 430.0182
ARG 440.0165
LEU 450.0126
GLU 460.0117
TRP 470.0084
VAL 480.0083
ALA 490.0064
THR 500.0043
ILE 510.0052
SER 520.0090
ASP 520.0120
GLY 530.0163
ASN 540.0164
SER 550.0125
TYR 560.0123
THR 570.0090
TYR 580.0071
TYR 590.0079
VAL 600.0106
ASP 610.0123
SER 620.0140
VAL 630.0106
LYS 640.0077
GLY 650.0071
ARG 660.0100
PHE 670.0090
THR 680.0076
ILE 690.0074
SER 700.0072
ARG 710.0110
ASP 720.0154
ASN 730.0180
ALA 740.0224
LYS 750.0228
ASN 760.0198
ASN 770.0169
LEU 780.0126
TYR 790.0125
LEU 800.0114
GLN 810.0126
MET 820.0142
SER 820.0153
SER 820.0161
LEU 820.0162
LYS 830.0165
SER 840.0173
GLU 850.0166
ASP 860.0151
THR 870.0167
ALA 880.0167
ILE 890.0157
TYR 900.0136
TYR 910.0119
CYS 920.0103
ALA 930.0082
ARG 940.0066
ASP 950.0063
GLY 960.0070
PRO 970.0079
THR 980.0086
ASP 990.0083
SER 1000.0068
SER 1000.0064
GLY 1000.0062
TYR 1000.0055
GLY 1000.0051
GLY 1000.0051
PHE 1000.0059
GLY 1010.0066
TYR 1020.0079
TRP 1030.0102
GLY 1040.0130
GLN 1050.0150
GLY 1060.0138
THR 1070.0159
LEU 1080.0165
VAL 1090.0160
THR 1100.0164
VAL 1110.0177
SER 1120.0157
GLU 1130.0140
ALA 1140.0070
LYS 1150.0046
THR 1160.0044
THR 1170.0057
PRO 1180.0072
PRO 1190.0075
SER 1200.0084
VAL 1210.0088
TYR 1220.0079
PRO 1230.0072
LEU 1240.0071
ALA 1250.0071
PRO 1260.0063
GLY 1270.0054
SER 1280.0066
ALA 1290.0084
ALA 1300.0082
GLN 1330.0120
THR 1340.0134
ASN 1350.0111
SER 1360.0142
MET 1370.0127
VAL 1380.0106
THR 1390.0080
LEU 1400.0080
GLY 1410.0081
CYS 1420.0082
LEU 1430.0080
VAL 1440.0087
LYS 1450.0085
GLY 1460.0082
TYR 1470.0072
PHE 1480.0050
PRO 1490.0036
GLU 1500.0038
PRO 1510.0066
VAL 1520.0062
THR 1530.0063
VAL 1540.0099
THR 1560.0119
TRP 1570.0117
ASN 1620.0137
SER 1630.0148
GLY 1640.0163
SER 1650.0175
LEU 1660.0155
SER 1670.0156
SER 1680.0154
GLY 1690.0119
VAL 1710.0098
HIS 1720.0084
THR 1730.0098
PHE 1740.0085
PRO 1750.0092
ALA 1760.0087
VAL 1770.0081
LEU 1780.0074
GLN 1790.0080
SER 1800.0104
ASP 1830.0086
LEU 1840.0081
TYR 1850.0081
THR 1860.0088
LEU 1870.0087
SER 1880.0086
SER 1890.0090
SER 1900.0082
VAL 1910.0096
THR 1920.0110
VAL 1930.0135
PRO 1940.0152
SER 1950.0152
SER 1960.0184
PRO 1980.0171
ARG 1990.0141
PRO 2000.0132
SER 2020.0161
GLU 2030.0163
THR 2040.0141
VAL 2050.0115
THR 2060.0110
CYS 2080.0095
ASN 2090.0098
VAL 2100.0098
ALA 2110.0068
HIS 2120.0069
PRO 2130.0080
ALA 2140.0063
SER 2150.0073
SER 2160.0080
THR 2170.0088
LYS 2180.0087
VAL 2190.0078
ASP 2200.0099
LYS 2210.0086
LYS 2220.0088
ILE 2230.0089
VAL 2260.0091
PRO 2270.0087
ARG 2280.0075
ASP 2320.0093
CYS 2330.0077

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.