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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0495
ILE 4790.0094
PHE 4800.0086
ILE 4810.0075
SER 4820.0065
ASP 4830.0075
ASP 4840.0075
LYS 4850.0044
ASP 4860.0041
SER 4870.0066
LEU 4880.0058
LYS 4890.0053
CYS 4900.0070
PRO 4910.0081
CYS 4920.0094
ASP 4930.0093
PRO 4940.0095
GLU 4950.0086
MET 4960.0073
VAL 4970.0069
SER 4980.0156
GLN 4990.0223
SER 5000.0362
THR 5010.0358
CYS 5020.0243
ARG 5030.0146
PHE 5040.0085
PHE 5050.0048
VAL 5060.0069
CYS 5070.0082
LYS 5080.0106
CYS 5090.0096
VAL 5100.0095
GLU 5110.0091
ARG 5120.0104
SER 20.0180
VAL 30.0218
LEU 40.0186
SER 50.0230
GLN 60.0175
SER 70.0201
PRO 80.0250
ALA 90.0229
ILE 100.0197
LEU 110.0211
SER 120.0229
ALA 130.0291
SER 140.0366
PRO 150.0402
GLY 160.0495
GLU 170.0453
LYS 180.0394
VAL 190.0300
THR 200.0220
MET 210.0165
THR 220.0193
CYS 230.0148
ARG 240.0198
ALA 250.0201
ARG 260.0246
SER 270.0195
SER 290.0132
VAL 300.0098
SER 310.0059
TYR 320.0078
MET 330.0078
HIS 340.0086
TRP 350.0078
TYR 360.0129
GLN 370.0130
GLN 380.0188
LYS 390.0220
SER 400.0297
GLY 410.0329
SER 420.0285
SER 430.0246
PRO 440.0208
LYS 450.0188
PRO 460.0155
TRP 470.0125
ILE 480.0070
HIS 490.0090
ALA 500.0064
THR 510.0028
SER 520.0041
ASN 530.0059
LEU 540.0136
ALA 550.0188
SER 560.0282
GLY 570.0350
VAL 580.0276
PRO 590.0342
ALA 600.0355
ARG 610.0341
PHE 620.0213
SER 630.0172
GLY 640.0099
SER 650.0101
GLY 660.0123
SER 670.0127
GLY 680.0148
THR 690.0177
SER 700.0167
TYR 710.0134
SER 720.0122
LEU 730.0094
THR 740.0201
ILE 750.0260
SER 760.0377
ARG 770.0428
VAL 780.0325
GLU 790.0344
ALA 800.0281
GLU 810.0287
ASP 820.0190
ALA 830.0105
ALA 840.0100
THR 850.0104
TYR 860.0082
TYR 870.0116
CYS 880.0104
GLN 890.0130
GLN 900.0121
TRP 910.0117
SER 920.0105
SER 930.0104
HIS 940.0104
PRO 950.0127
PRO 960.0136
THR 970.0152
PHE 980.0166
GLY 990.0150
SER 1000.0172
GLY 1010.0152
THR 1020.0105
LYS 1030.0073
LEU 1040.0067
GLU 1050.0089
ILE 1060.0178
LYS 1070.0258
ARG 1080.0279
ALA 1090.0307
ASP 1100.0220
ALA 1110.0186
ALA 1120.0149
PRO 1130.0060
THR 1140.0067
VAL 1150.0040
SER 1160.0042
ILE 1170.0041
PHE 1180.0037
PRO 1190.0026
PRO 1200.0019
SER 1210.0009
SER 1220.0003
GLU 1230.0008
GLN 1240.0007
LEU 1250.0009
THR 1260.0007
SER 1270.0007
GLY 1280.0018
GLY 1290.0019
ALA 1300.0019
SER 1310.0030
VAL 1320.0034
VAL 1330.0038
CYS 1340.0047
PHE 1350.0046
LEU 1360.0036
ASN 1370.0061
ASN 1380.0079
PHE 1390.0069
TYR 1400.0127
PRO 1410.0138
LYS 1420.0090
ASP 1430.0129
ILE 1440.0099
ASN 1450.0106
VAL 1460.0060
LYS 1470.0066
TRP 1480.0052
LYS 1490.0050
ILE 1500.0039
ASP 1510.0038
GLY 1520.0057
SER 1530.0065
GLU 1540.0069
ARG 1550.0066
GLN 1560.0064
ASN 1570.0070
GLY 1580.0067
VAL 1590.0056
LEU 1600.0063
ASN 1610.0084
SER 1620.0087
TRP 1630.0076
THR 1640.0114
ASP 1650.0101
GLN 1660.0072
ASP 1670.0163
SER 1680.0237
LYS 1690.0316
ASP 1700.0242
SER 1710.0180
THR 1720.0116
TYR 1730.0038
SER 1740.0046
MET 1750.0056
SER 1760.0057
SER 1770.0055
THR 1780.0051
LEU 1790.0038
THR 1800.0037
LEU 1810.0036
THR 1820.0026
LYS 1830.0020
ASP 1840.0023
GLU 1850.0027
TYR 1860.0024
GLU 1870.0023
ARG 1880.0023
HIS 1890.0027
ASN 1900.0029
SER 1910.0030
TYR 1920.0029
THR 1930.0034
CYS 1940.0038
GLU 1950.0059
ALA 1960.0066
THR 1970.0129
HIS 1980.0144
LYS 1990.0207
THR 2000.0221
SER 2010.0231
THR 2020.0290
SER 2030.0183
PRO 2040.0124
ILE 2050.0092
VAL 2060.0051
LYS 2070.0039
SER 2080.0036
PHE 2090.0031
ASN 2100.0031
ARG 2110.0027
ASN 2120.0029
GLU 2130.0026
CYS 2140.0019
GLU 10.0404
VAL 20.0300
GLN 30.0281
LEU 40.0208
VAL 50.0210
GLU 60.0137
SER 70.0136
GLY 80.0117
GLY 90.0055
GLY 100.0068
LEU 110.0091
VAL 120.0177
LYS 130.0278
PRO 140.0327
GLY 150.0367
GLY 160.0299
SER 170.0244
LEU 180.0177
LYS 190.0148
LEU 200.0090
SER 210.0146
CYS 220.0152
ALA 230.0231
ALA 240.0251
SER 250.0320
GLY 260.0361
PHE 270.0306
ILE 280.0285
PHE 290.0237
SER 300.0205
ASP 310.0152
TYR 320.0119
TYR 330.0070
MET 340.0084
TYR 350.0072
TRP 360.0072
VAL 370.0141
ARG 380.0167
GLN 390.0227
THR 400.0274
PRO 410.0334
GLU 420.0381
LYS 430.0301
ARG 440.0268
LEU 450.0218
GLU 460.0196
TRP 470.0153
VAL 480.0109
ALA 490.0059
THR 500.0034
ILE 510.0037
SER 520.0035
ASP 520.0079
GLY 530.0110
ASN 540.0122
SER 550.0095
TYR 560.0077
THR 570.0062
TYR 580.0071
TYR 590.0105
VAL 600.0158
ASP 610.0248
SER 620.0288
VAL 630.0226
LYS 640.0239
GLY 650.0276
ARG 660.0260
PHE 670.0169
THR 680.0160
ILE 690.0103
SER 700.0146
ARG 710.0179
ASP 720.0261
ASN 730.0272
ALA 740.0365
LYS 750.0356
ASN 760.0285
ASN 770.0227
LEU 780.0149
TYR 790.0134
LEU 800.0091
GLN 810.0159
MET 820.0179
SER 820.0271
SER 820.0325
LEU 820.0262
LYS 830.0308
SER 840.0287
GLU 850.0297
ASP 860.0201
THR 870.0168
ALA 880.0182
ILE 890.0172
TYR 900.0118
TYR 910.0136
CYS 920.0102
ALA 930.0140
ARG 940.0123
ASP 950.0131
GLY 960.0173
PRO 970.0138
THR 980.0120
ASP 990.0136
SER 1000.0143
SER 1000.0124
GLY 1000.0107
TYR 1000.0126
GLY 1000.0127
GLY 1000.0145
PHE 1000.0149
GLY 1010.0155
TYR 1020.0165
TRP 1030.0177
GLY 1040.0164
GLN 1050.0196
GLY 1060.0169
THR 1070.0125
LEU 1080.0115
VAL 1090.0063
THR 1100.0092
VAL 1110.0165
SER 1120.0218
GLU 1130.0288
ALA 1140.0210
LYS 1150.0196
THR 1160.0138
THR 1170.0133
PRO 1180.0104
PRO 1190.0060
SER 1200.0055
VAL 1210.0019
TYR 1220.0010
PRO 1230.0013
LEU 1240.0022
ALA 1250.0026
PRO 1260.0034
GLY 1270.0022
SER 1280.0028
ALA 1290.0036
ALA 1300.0063
GLN 1330.0107
THR 1340.0153
ASN 1350.0167
SER 1360.0189
MET 1370.0150
VAL 1380.0114
THR 1390.0061
LEU 1400.0043
GLY 1410.0032
CYS 1420.0026
LEU 1430.0022
VAL 1440.0012
LYS 1450.0030
GLY 1460.0066
TYR 1470.0057
PHE 1480.0069
PRO 1490.0039
GLU 1500.0031
PRO 1510.0059
VAL 1520.0057
THR 1530.0087
VAL 1540.0049
THR 1560.0066
TRP 1570.0076
ASN 1620.0107
SER 1630.0106
GLY 1640.0112
SER 1650.0128
LEU 1660.0112
SER 1670.0106
SER 1680.0131
GLY 1690.0113
VAL 1710.0072
HIS 1720.0078
THR 1730.0075
PHE 1740.0088
PRO 1750.0103
ALA 1760.0095
VAL 1770.0110
LEU 1780.0122
GLN 1790.0151
SER 1800.0182
ASP 1830.0161
LEU 1840.0114
TYR 1850.0075
THR 1860.0059
LEU 1870.0055
SER 1880.0057
SER 1890.0047
SER 1900.0057
VAL 1910.0067
THR 1920.0094
VAL 1930.0122
PRO 1940.0166
SER 1950.0160
SER 1960.0184
PRO 1980.0171
ARG 1990.0135
PRO 2000.0124
SER 2020.0167
GLU 2030.0171
THR 2040.0140
VAL 2050.0094
THR 2060.0081
CYS 2080.0061
ASN 2090.0076
VAL 2100.0063
ALA 2110.0096
HIS 2120.0081
PRO 2130.0117
ALA 2140.0109
SER 2150.0140
SER 2160.0159
THR 2170.0121
LYS 2180.0121
VAL 2190.0096
ASP 2200.0081
LYS 2210.0060
LYS 2220.0074
ILE 2230.0052
VAL 2260.0064
PRO 2270.0050
ARG 2280.0025
ASP 2320.0024
CYS 2330.0025

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.