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***  2J5L Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex  ***

<R2> analysis for 2608162332391822803

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1254
ILE 4790.0190
PHE 4800.0156
ILE 4810.0074
SER 4820.0121
ASP 4830.0195
ASP 4840.0140
LYS 4850.0036
ASP 4860.0056
SER 4870.0097
LEU 4880.0103
LYS 4890.0108
CYS 4900.0118
PRO 4910.0126
CYS 4920.0118
ASP 4930.0118
PRO 4940.0176
GLU 4950.0198
MET 4960.0164
VAL 4970.0341
SER 4980.0553
GLN 4990.0871
SER 5000.1254
THR 5010.1144
CYS 5020.0756
ARG 5030.0376
PHE 5040.0191
PHE 5050.0058
VAL 5060.0140
CYS 5070.0155
LYS 5080.0190
CYS 5090.0151
VAL 5100.0173
GLU 5110.0170
ARG 5120.0220
SER 20.0098
VAL 30.0074
LEU 40.0026
SER 50.0060
GLN 60.0098
SER 70.0133
PRO 80.0164
ALA 90.0160
ILE 100.0167
LEU 110.0179
SER 120.0179
ALA 130.0185
SER 140.0183
PRO 150.0184
GLY 160.0196
GLU 170.0202
LYS 180.0187
VAL 190.0177
THR 200.0177
MET 210.0152
THR 220.0120
CYS 230.0074
ARG 240.0025
ALA 250.0044
ARG 260.0103
SER 270.0140
SER 290.0158
VAL 300.0140
SER 310.0171
TYR 320.0141
MET 330.0106
HIS 340.0109
TRP 350.0130
TYR 360.0144
GLN 370.0179
GLN 380.0192
LYS 390.0205
SER 400.0208
GLY 410.0299
SER 420.0256
SER 430.0197
PRO 440.0169
LYS 450.0188
PRO 460.0168
TRP 470.0182
ILE 480.0171
HIS 490.0163
ALA 500.0162
THR 510.0156
SER 520.0201
ASN 530.0217
LEU 540.0236
ALA 550.0224
SER 560.0291
GLY 570.0305
VAL 580.0269
PRO 590.0231
ALA 600.0217
ARG 610.0202
PHE 620.0213
SER 630.0190
GLY 640.0157
SER 650.0173
GLY 660.0144
SER 670.0147
GLY 680.0149
THR 690.0092
SER 700.0094
TYR 710.0098
SER 720.0131
LEU 730.0171
THR 740.0174
ILE 750.0189
SER 760.0193
ARG 770.0196
VAL 780.0186
GLU 790.0194
ALA 800.0158
GLU 810.0166
ASP 820.0172
ALA 830.0159
ALA 840.0170
THR 850.0176
TYR 860.0157
TYR 870.0122
CYS 880.0093
GLN 890.0059
GLN 900.0069
TRP 910.0089
SER 920.0138
SER 930.0132
HIS 940.0114
PRO 950.0079
PRO 960.0041
THR 970.0021
PHE 980.0052
GLY 990.0071
SER 1000.0113
GLY 1010.0149
THR 1020.0157
LYS 1030.0163
LEU 1040.0157
GLU 1050.0146
ILE 1060.0139
LYS 1070.0126
ARG 1080.0075
ALA 1090.0054
ASP 1100.0052
ALA 1110.0055
ALA 1120.0054
PRO 1130.0065
THR 1140.0066
VAL 1150.0063
SER 1160.0084
ILE 1170.0080
PHE 1180.0069
PRO 1190.0082
PRO 1200.0080
SER 1210.0080
SER 1220.0105
GLU 1230.0089
GLN 1240.0074
LEU 1250.0100
THR 1260.0115
SER 1270.0100
GLY 1280.0089
GLY 1290.0070
ALA 1300.0078
SER 1310.0069
VAL 1320.0072
VAL 1330.0076
CYS 1340.0065
PHE 1350.0070
LEU 1360.0071
ASN 1370.0063
ASN 1380.0059
PHE 1390.0050
TYR 1400.0045
PRO 1410.0047
LYS 1420.0051
ASP 1430.0056
ILE 1440.0049
ASN 1450.0060
VAL 1460.0111
LYS 1470.0118
TRP 1480.0107
LYS 1490.0153
ILE 1500.0148
ASP 1510.0175
GLY 1520.0212
SER 1530.0202
GLU 1540.0196
ARG 1550.0178
GLN 1560.0154
ASN 1570.0152
GLY 1580.0112
VAL 1590.0109
LEU 1600.0116
ASN 1610.0077
SER 1620.0080
TRP 1630.0079
THR 1640.0069
ASP 1650.0053
GLN 1660.0052
ASP 1670.0076
SER 1680.0064
LYS 1690.0045
ASP 1700.0060
SER 1710.0057
THR 1720.0056
TYR 1730.0043
SER 1740.0051
MET 1750.0065
SER 1760.0084
SER 1770.0079
THR 1780.0076
LEU 1790.0090
THR 1800.0079
LEU 1810.0078
THR 1820.0081
LYS 1830.0102
ASP 1840.0117
GLU 1850.0116
TYR 1860.0116
GLU 1870.0142
ARG 1880.0155
HIS 1890.0164
ASN 1900.0178
SER 1910.0158
TYR 1920.0132
THR 1930.0135
CYS 1940.0091
GLU 1950.0100
ALA 1960.0098
THR 1970.0052
HIS 1980.0045
LYS 1990.0045
THR 2000.0049
SER 2010.0063
THR 2020.0075
SER 2030.0072
PRO 2040.0078
ILE 2050.0074
VAL 2060.0113
LYS 2070.0101
SER 2080.0106
PHE 2090.0148
ASN 2100.0168
ARG 2110.0157
ASN 2120.0207
GLU 2130.0201
CYS 2140.0190
GLU 10.0304
VAL 20.0223
GLN 30.0195
LEU 40.0129
VAL 50.0147
GLU 60.0139
SER 70.0135
GLY 80.0155
GLY 90.0161
GLY 100.0131
LEU 110.0136
VAL 120.0140
LYS 130.0161
PRO 140.0172
GLY 150.0169
GLY 160.0193
SER 170.0176
LEU 180.0164
LYS 190.0148
LEU 200.0128
SER 210.0096
CYS 220.0092
ALA 230.0103
ALA 240.0106
SER 250.0162
GLY 260.0210
PHE 270.0190
ILE 280.0162
PHE 290.0112
SER 300.0120
ASP 310.0131
TYR 320.0101
TYR 330.0072
MET 340.0034
TYR 350.0014
TRP 360.0053
VAL 370.0081
ARG 380.0126
GLN 390.0165
THR 400.0213
PRO 410.0269
GLU 420.0276
LYS 430.0215
ARG 440.0167
LEU 450.0116
GLU 460.0101
TRP 470.0058
VAL 480.0080
ALA 490.0057
THR 500.0046
ILE 510.0061
SER 520.0089
ASP 520.0093
GLY 530.0105
ASN 540.0105
SER 550.0091
TYR 560.0098
THR 570.0088
TYR 580.0089
TYR 590.0089
VAL 600.0091
ASP 610.0132
SER 620.0164
VAL 630.0156
LYS 640.0147
GLY 650.0176
ARG 660.0180
PHE 670.0145
THR 680.0122
ILE 690.0077
SER 700.0067
ARG 710.0036
ASP 720.0030
ASN 730.0066
ALA 740.0065
LYS 750.0050
ASN 760.0069
ASN 770.0039
LEU 780.0032
TYR 790.0071
LEU 800.0101
GLN 810.0136
MET 820.0158
SER 820.0184
SER 820.0206
LEU 820.0202
LYS 830.0216
SER 840.0227
GLU 850.0227
ASP 860.0197
THR 870.0206
ALA 880.0192
ILE 890.0173
TYR 900.0135
TYR 910.0113
CYS 920.0075
ALA 930.0071
ARG 940.0074
ASP 950.0099
GLY 960.0138
PRO 970.0123
THR 980.0115
ASP 990.0159
SER 1000.0180
SER 1000.0154
GLY 1000.0149
TYR 1000.0130
GLY 1000.0091
GLY 1000.0079
PHE 1000.0071
GLY 1010.0112
TYR 1020.0121
TRP 1030.0124
GLY 1040.0133
GLN 1050.0173
GLY 1060.0139
THR 1070.0149
LEU 1080.0162
VAL 1090.0158
THR 1100.0163
VAL 1110.0169
SER 1120.0144
GLU 1130.0150
ALA 1140.0139
LYS 1150.0141
THR 1160.0125
THR 1170.0122
PRO 1180.0094
PRO 1190.0081
SER 1200.0071
VAL 1210.0047
TYR 1220.0041
PRO 1230.0041
LEU 1240.0056
ALA 1250.0056
PRO 1260.0074
GLY 1270.0121
SER 1280.0166
ALA 1290.0155
ALA 1300.0151
GLN 1330.0117
THR 1340.0160
ASN 1350.0209
SER 1360.0213
MET 1370.0173
VAL 1380.0132
THR 1390.0089
LEU 1400.0071
GLY 1410.0067
CYS 1420.0057
LEU 1430.0062
VAL 1440.0074
LYS 1450.0088
GLY 1460.0091
TYR 1470.0097
PHE 1480.0116
PRO 1490.0113
GLU 1500.0110
PRO 1510.0102
VAL 1520.0085
THR 1530.0074
VAL 1540.0085
THR 1560.0092
TRP 1570.0091
ASN 1620.0105
SER 1630.0113
GLY 1640.0135
SER 1650.0131
LEU 1660.0121
SER 1670.0131
SER 1680.0132
GLY 1690.0122
VAL 1710.0091
HIS 1720.0091
THR 1730.0095
PHE 1740.0090
PRO 1750.0102
ALA 1760.0118
VAL 1770.0119
LEU 1780.0127
GLN 1790.0128
SER 1800.0137
ASP 1830.0131
LEU 1840.0122
TYR 1850.0114
THR 1860.0105
LEU 1870.0096
SER 1880.0079
SER 1890.0080
SER 1900.0083
VAL 1910.0087
THR 1920.0124
VAL 1930.0138
PRO 1940.0177
SER 1950.0155
SER 1960.0168
PRO 1980.0161
ARG 1990.0111
PRO 2000.0085
SER 2020.0138
GLU 2030.0161
THR 2040.0121
VAL 2050.0084
THR 2060.0069
CYS 2080.0063
ASN 2090.0068
VAL 2100.0069
ALA 2110.0076
HIS 2120.0089
PRO 2130.0107
ALA 2140.0114
SER 2150.0108
SER 2160.0102
THR 2170.0080
LYS 2180.0073
VAL 2190.0050
ASP 2200.0054
LYS 2210.0038
LYS 2220.0052
ILE 2230.0044
VAL 2260.0063
PRO 2270.0057
ARG 2280.0094
ASP 2320.0177
CYS 2330.0218

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.